Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Y05SLV Arachis hypogaea HOM05D004561 ORTHO05D005315 1.7e-67 259.2 131 100.0
arahy.Tifrunner.gnm1.ann1.AX2CN5 Arachis hypogaea HOM05D004561 ORTHO05D005315 1.1e-37 160.2 78 97.4
Lalb_Chr12g0208781 Lupinus albus HOM05D004561 ORTHO05D005315 4.0e-37 158.3 97 76.3
Lj4g0004659 Lotus japonicus HOM05D004561 ORTHO05D005315 7.6e-36 154.1 97 74.2
Psat1g047920 Pisum sativum HOM05D004561 ORTHO05D005315 3.2e-34 148.7 97 75.3
Glyma.05G126500 Glycine max HOM05D004561 ORTHO05D005315 4.2e-34 148.3 96 74.0
Phvul.002G198500 Phaseolus vulgaris HOM05D004561 ORTHO05D005315 4.2e-34 148.3 96 72.9
VMungo0251G0557 Vigna mungo HOM05D004561 ORTHO05D005315 4.2e-34 148.3 97 71.1
TPR.G30372 Trifolium pratense HOM05D004561 ORTHO05D005315 9.3e-34 147.1 97 74.2
Glyma.08G081300 Glycine max HOM05D004561 ORTHO05D005315 1.6e-33 146.4 97 72.2
Medtr4g094538 Medicago truncatula HOM05D004561 ORTHO05D005315 3.5e-33 145.2 97 71.1
CSS0045511 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 6.2e-30 134.4 96 63.5
Dinv14864 Davidia involucrata HOM05D004561 ORTHO05D005315 1.1e-29 133.7 97 66.0
Lj1A1185G61 Lonicera japonica HOM05D004561 ORTHO05D005315 9.0e-29 130.6 99 61.6
Sopen08g023020 Solanum pennellii HOM05D004561 ORTHO05D005315 9.0e-29 130.6 96 65.6
Solyc08g074360.3 Solanum lycopersicum HOM05D004561 ORTHO05D005315 1.2e-28 130.2 96 64.6
COL.COLO4_13996 Corchorus olitorius HOM05D004561 ORTHO05D005315 2.0e-28 129.4 97 61.9
Sopen11g009350 Solanum pennellii HOM05D004561 ORTHO05D005315 2.0e-28 129.4 96 63.5
Eucgr.B03172 Eucalyptus grandis HOM05D004561 ORTHO05D005315 3.4e-28 128.6 94 62.8
Hma1.2p1_0018F.1_g012650 Hydrangea macrophylla HOM05D004561 ORTHO05D005315 4.5e-28 128.3 96 62.5
CAN.G370.25 Capsicum annuum HOM05D004561 ORTHO05D005315 7.6e-28 127.5 96 62.5
PGSC0003DMG400009224 Solanum tuberosum HOM05D004561 ORTHO05D005315 7.6e-28 127.5 96 61.5
CiPaw.15G149700 Carya illinoinensis HOM05D004561 ORTHO05D005315 4.9e-27 124.8 98 61.2
Potri.012G041700 Populus trichocarpa HOM05D004561 ORTHO05D005315 4.9e-27 124.8 97 55.7
Atru.chr13.142 Acer truncatum HOM05D004561 ORTHO05D005315 8.4e-27 124.0 94 61.7
QL09p040874 Quercus lobata HOM05D004561 ORTHO05D005315 8.4e-27 124.0 97 60.8
MELO3C017214.2 Cucumis melo HOM05D004561 ORTHO05D005315 1.4e-26 123.2 94 60.6
Thecc.01G124300 Theobroma cacao HOM05D004561 ORTHO05D005315 1.4e-26 123.2 97 59.8
Solyc11g017400.2 Solanum lycopersicum HOM05D004561 ORTHO05D005315 1.9e-26 122.9 96 61.5
Sabra12G0028700 Salix brachista HOM05D004561 ORTHO05D005315 2.4e-26 122.5 97 55.7
GSVIVG01028605001 Vitis vinifera HOM05D004561 ORTHO05D005315 2.4e-26 122.5 96 60.4
FvH4_7g18930 Fragaria vesca HOM05D004561 ORTHO05D005315 3.2e-26 122.1 97 61.9
FAN06G3856 Fragaria x ananassa HOM05D004561 ORTHO05D005315 3.2e-26 122.1 97 61.9
Lsat_1_v5_gn_7_30581 Lactuca sativa HOM05D004561 ORTHO05D005315 3.2e-26 122.1 92 66.3
TWI81G0190 Tripterygium wilfordii HOM05D004561 ORTHO05D005315 3.2e-26 122.1 96 60.4
FvH4_5g18940 Fragaria vesca HOM05D004561 ORTHO05D005315 4.2e-26 121.7 97 61.9
FAN08G3218 Fragaria x ananassa HOM05D004561 ORTHO05D005315 4.2e-26 121.7 97 61.9
Prupe.5G069900 Prunus persica HOM05D004561 ORTHO05D005315 4.2e-26 121.7 97 59.8
HanXRQChr15g0480201 Helianthus annuus HOM05D004561 ORTHO05D005315 5.5e-26 121.3 96 59.4
CsaV3_1G002780 Cucumis sativus L. HOM05D004561 ORTHO05D005315 7.1e-26 120.9 94 61.7
Gorai.012G033300 Gossypium raimondii HOM05D004561 ORTHO05D005315 1.6e-25 119.8 96 59.4
TAR628G1415 Trochodendron aralioides HOM05D004561 ORTHO05D005315 2.1e-25 119.4 97 56.7
RcHm_v2.0_Chr7g0203411 Rosa chinensis HOM05D004561 ORTHO05D005315 2.7e-25 119.0 100 57.0
vmacro18667 Vaccinium macrocarpon HOM05D004561 ORTHO05D005315 2.7e-25 119.0 96 59.4
FAN13G2292 Fragaria x ananassa HOM05D004561 ORTHO05D005315 3.5e-25 118.6 97 60.8
FAN18G3337 Fragaria x ananassa HOM05D004561 ORTHO05D005315 3.5e-25 118.6 97 60.8
TWI15G0666 Tripterygium wilfordii HOM05D004561 ORTHO05D005315 3.5e-25 118.6 96 57.3
Peaxi162Scf00152g00158 Petunia axillaris HOM05D004561 ORTHO05D005315 4.6e-25 118.2 99 59.6
RcHm_v2.0_Chr7g0203331 Rosa chinensis HOM05D004561 ORTHO05D005315 4.6e-25 118.2 97 58.8
MSTRG.22847 Avicennia marina HOM05D004561 ORTHO05D005315 6.0e-25 117.9 97 56.7
Gohir.D04G023500 Gossypium hirsutum HOM05D004561 ORTHO05D005315 7.9e-25 117.5 96 58.3
MD16G1270300 Malus domestica HOM05D004561 ORTHO05D005315 7.9e-25 117.5 96 59.4
Sed0015683 Sechium edule HOM05D004561 ORTHO05D005315 7.9e-25 117.5 94 59.6
Ciclev10002226m.g Citrus clementina HOM05D004561 ORTHO05D005315 1.0e-24 117.1 94 56.4
Gohir.A05G386400 Gossypium hirsutum HOM05D004561 ORTHO05D005315 1.0e-24 117.1 96 58.3
Migut.I00621 Erythranthe guttata HOM05D004561 ORTHO05D005315 1.3e-24 116.7 97 56.7
Hund26218 Selenicereus undatus HOM05D004561 ORTHO05D005315 1.3e-24 116.7 96 58.3
Sopen05g006540 Solanum pennellii HOM05D004561 ORTHO05D005315 3.9e-24 115.2 75 70.7
MSTRG.11225 Avicennia marina HOM05D004561 ORTHO05D005315 5.1e-24 114.8 97 54.6
Nn5g27375 Nelumbo nucifera HOM05D004561 ORTHO05D005315 5.1e-24 114.8 96 52.1
ECA233G0879 Erigeron canadensis HOM05D004561 ORTHO05D005315 6.7e-24 114.4 96 57.3
ATR0661G441 Amborella trichopoda HOM05D004561 ORTHO05D005315 1.1e-23 113.6 96 55.2
FAN06G2746 Fragaria x ananassa HOM05D004561 ORTHO05D005315 1.5e-23 113.2 90 62.2
ECA236G3170 Erigeron canadensis HOM05D004561 ORTHO05D005315 1.9e-23 112.8 98 55.1
PSO210G6857 Papaver somniferum HOM05D004561 ORTHO05D005315 3.3e-23 112.1 94 54.3
BcaB02g07548 Brassica carinata HOM05D004561 ORTHO05D005315 1.3e-22 110.2 96 57.3
Sc18g0002470 Simmondsia chinensis HOM05D004561 ORTHO05D005315 1.3e-22 110.2 96 56.2
Manes.08G062966 Manihot esculenta HOM05D004561 ORTHO05D005315 1.6e-22 109.8 88 59.1
THA.LOC104822320 Tarenaya hassleriana HOM05D004561 ORTHO05D005315 1.6e-22 109.8 95 56.8
Aa31LG10G12840 Aethionema arabicum HOM05D004561 ORTHO05D005315 2.8e-22 109.0 94 55.3
Aqoxy6G01699 Aquilegia oxysepala HOM05D004561 ORTHO05D005315 2.8e-22 109.0 86 58.1
FAN04G2378 Fragaria x ananassa HOM05D004561 ORTHO05D005315 3.7e-22 108.6 87 60.9
Oeu031248.3 Olea europaea HOM05D004561 ORTHO05D005315 6.2e-22 107.8 107 49.5
A09p50910 Brassica napus HOM05D004561 ORTHO05D005315 8.1e-22 107.5 96 55.2
CARHR168490 Cardamine hirsuta HOM05D004561 ORTHO05D005315 1.1e-21 107.1 96 55.2
Solyc05g010730.3 Solanum lycopersicum HOM05D004561 ORTHO05D005315 1.4e-21 106.7 69 69.6
AT3G58130 Arabidopsis thaliana HOM05D004561 ORTHO05D005315 2.4e-21 105.9 96 53.1
MD06G1059000 Malus domestica HOM05D004561 ORTHO05D005315 2.4e-21 105.9 103 49.5
C08p33660 Brassica napus HOM05D004561 ORTHO05D005315 3.1e-21 105.5 96 54.2
MBI08_g32523_MAGBIO Magnolia biondii HOM05D004561 ORTHO05D005315 4.0e-21 105.1 75 58.7
AL5G39820 Arabidopsis lyrata HOM05D004561 ORTHO05D005315 5.3e-21 104.8 96 54.2
BcaC07g40276 Brassica carinata HOM05D004561 ORTHO05D005315 5.3e-21 104.8 96 54.2
A07p23920 Brassica napus HOM05D004561 ORTHO05D005315 6.9e-21 104.4 96 54.2
BraA07t30043Z Brassica rapa HOM05D004561 ORTHO05D005315 6.9e-21 104.4 96 54.2
Zm00001eb433850 Zea mays HOM05D004561 ORTHO05D005315 6.9e-21 104.4 96 53.1
BcaC08g44900 Brassica carinata HOM05D004561 ORTHO05D005315 1.2e-20 103.6 96 54.2
AT2G27340 Arabidopsis thaliana HOM05D004561 ORTHO05D005315 1.5e-20 103.2 96 53.1
Cc03_g07430 Coffea canephora HOM05D004561 ORTHO05D005315 1.5e-20 103.2 104 50.0
SalBow3G1851 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.5e-20 103.2 96 52.1
Carub.0005s2498 Capsella rubella HOM05D004561 ORTHO05D005315 2.0e-20 102.8 88 56.8
CDE04G2633 Ceratophyllum demersum HOM05D004561 ORTHO05D005315 2.0e-20 102.8 98 50.0
C06p25150 Brassica napus HOM05D004561 ORTHO05D005315 2.6e-20 102.4 96 54.2
SalBow1G5912 Salvia bowleyana HOM05D004561 ORTHO05D005315 2.6e-20 102.4 96 54.2
Carub.0339s0001 Capsella rubella HOM05D004561 ORTHO05D005315 4.5e-20 101.7 96 52.1
Sp5g04590 Schrenkiella parvula HOM05D004561 ORTHO05D005315 4.5e-20 101.7 96 53.1
Os04g0678800 Oryza sativa ssp. japonica HOM05D004561 ORTHO05D005315 5.8e-20 101.3 96 55.2
BolC6t37673H Brassica oleracea HOM05D004561 ORTHO05D005315 7.6e-20 100.9 96 53.1
Thhalv10002077m.g Eutrema salsugineum HOM05D004561 ORTHO05D005315 1.0e-19 100.5 99 53.5
Nitab4.5_0000422g0080 Nicotiana tabacum HOM05D004561 ORTHO05D005315 1.0e-19 100.5 80 58.8
PGSC0003DMG403029595 Solanum tuberosum HOM05D004561 ORTHO05D005315 1.0e-19 100.5 77 61.0
unitig_744.g24647 Utricularia gibba HOM05D004561 ORTHO05D005315 1.3e-19 100.1 106 50.9
SHI05351 Sapria himalayana HOM05D004561 ORTHO05D005315 1.4e-18 96.7 104 49.0
Nitab4.5_0013603g0010 Nicotiana tabacum HOM05D004561 ORTHO05D005315 1.9e-18 96.3 77 57.1
SEGI_12631 Sequoiadendron giganteum HOM05D004561 ORTHO05D005315 4.2e-18 95.1 75 53.3
Rhsim06G0237000 Rhododendron simsii HOM05D004561 ORTHO05D005315 4.6e-17 91.7 77 50.6
Thhalv10002036m.g Eutrema salsugineum HOM05D004561 ORTHO05D005315 1.3e-16 90.1 96 50.0
Cpa.g.sc437.1 Carica papaya HOM05D004561 ORTHO05D005315 3.9e-16 88.6 99 45.5
DCAR_002722 Daucus carota HOM05D004561 ORTHO05D005315 6.7e-16 87.8 90 53.3
Pp3c13_19470 Physcomitrium patens HOM05D004561 ORTHO05D005315 1.9e-15 86.3 86 48.8
FAN18G2677 Fragaria x ananassa HOM05D004561 ORTHO05D005315 4.3e-15 85.1 102 47.1
Peaxi162Scf00310g00711 Petunia axillaris HOM05D004561 ORTHO05D005315 4.3e-15 85.1 72 55.6
AagrBONN_evm.TU.Sc2ySwM_368.3407 Anthoceros agrestis HOM05D004561 ORTHO05D005315 9.6e-15 84.0 90 44.4
ClCG06G015750 Citrullus lanatus HOM05D000113 ORTHO05D002571 4.8e-14 81.6 75 52.0
AUR62021469 Chenopodium quinoa HOM05D004561 ORTHO05D005315 1.4e-13 80.1 78 50.0
SGA_v2.0_scaffold37G14646 Striga asiatica HOM05D004561 ORTHO05D005315 9.0e-13 77.4 74 47.3
AUR62007426 Chenopodium quinoa HOM05D004561 ORTHO05D005315 2.0e-12 76.3 76 48.7
Lj6g0005186 Lotus japonicus HOM05D004561 ORTHO05D005315 2.0e-12 76.3 58 60.3
SHI05852 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-12 74.7 91 46.2
AUR62010959 Chenopodium quinoa HOM05D004561 ORTHO05D005315 1.7e-11 73.2 76 47.4
AUR62002652 Chenopodium quinoa HOM05D004561 ORTHO05D005315 2.9e-11 72.4 107 41.1
SalBow1G4548 Salvia bowleyana HOM05D004561 ORTHO05D005315 5.0e-11 71.6 80 42.5
EL10Ac8g18446 Beta vulgaris HOM05D004561 ORTHO05D005315 8.4e-11 70.9 96 45.8
SalBow1G7315 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.2e-09 67.0 55 54.5
CBR_g12600 Chara braunii HOM05D005240 ORTHO05D006471 5.7e-07 58.2 87 37.9
MCO09G807 Micromonas commoda HOM05D004561 ORTHO05D005315 9.7e-07 57.4 92 40.2
Mapoly0029s0047 Marchantia polymorpha HOM05D004561 ORTHO05D005315 4.8e-06 55.1 73 41.1


User provided reference genes

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