Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.XZYA5I Arachis hypogaea HOM05D003720 ORTHO05D005312 2.2e-105 385.6 188 100.0
arahy.Tifrunner.gnm1.ann1.S8F21X Arachis hypogaea HOM05D003720 ORTHO05D005312 3.2e-80 302.0 203 78.3
arahy.Tifrunner.gnm1.ann1.F3YJTF Arachis hypogaea HOM05D003720 ORTHO05D005312 5.5e-80 301.2 193 80.8
Lj4g0009521 Lotus japonicus HOM05D003720 ORTHO05D005312 5.5e-80 301.2 203 77.8
Ca_02544_v3 Cicer arietinum L. HOM05D003720 ORTHO05D005312 7.2e-80 300.8 203 77.8
Medtr4g112045 Medicago truncatula HOM05D003720 ORTHO05D005312 1.6e-79 299.7 203 77.3
Phvul.003G176300 Phaseolus vulgaris HOM05D003720 ORTHO05D005312 1.6e-79 299.7 203 77.3
Psat4g042800 Pisum sativum HOM05D003720 ORTHO05D005312 3.6e-79 298.5 202 77.2
TPR.G26776 Trifolium pratense HOM05D003720 ORTHO05D005312 3.6e-79 298.5 203 76.8
VMungo1215G1596 Vigna mungo HOM05D003720 ORTHO05D005312 3.6e-79 298.5 203 76.8
Glyma.05G012400 Glycine max HOM05D003720 ORTHO05D005312 6.1e-79 297.7 203 76.4
Glyma.17G120500 Glycine max HOM05D003720 ORTHO05D005312 6.1e-79 297.7 203 76.4
Manes.03G068200 Manihot esculenta HOM05D003720 ORTHO05D005312 1.0e-78 297.0 203 76.4
TAR626G1854 Trochodendron aralioides HOM05D003720 ORTHO05D005312 1.0e-78 297.0 203 75.4
Hund12707 Selenicereus undatus HOM05D003720 ORTHO05D005312 5.2e-78 294.7 203 75.4
Lalb_Chr12g0197621 Lupinus albus HOM05D003720 ORTHO05D005312 1.2e-77 293.5 203 76.8
AUR62027382 Chenopodium quinoa HOM05D003720 ORTHO05D005312 1.5e-77 293.1 203 75.4
Lalb_Chr13g0302281 Lupinus albus HOM05D003720 ORTHO05D005312 1.5e-77 293.1 203 76.8
GSVIVG01015442001 Vitis vinifera HOM05D003720 ORTHO05D005312 1.5e-77 293.1 203 74.9
Eucgr.C04138 Eucalyptus grandis HOM05D003720 ORTHO05D005312 2.0e-77 292.7 203 75.4
Dinv36598 Davidia involucrata HOM05D003720 ORTHO05D005312 2.6e-77 292.4 203 73.9
Nn8g39280 Nelumbo nucifera HOM05D003720 ORTHO05D005312 2.6e-77 292.4 202 75.2
Peaxi162Scf00256g00817 Petunia axillaris HOM05D003720 ORTHO05D005312 2.6e-77 292.4 203 74.4
Cc06_g09260 Coffea canephora HOM05D003720 ORTHO05D005312 3.3e-77 292.0 203 74.4
Dinv41570 Davidia involucrata HOM05D003720 ORTHO05D005312 3.3e-77 292.0 203 74.4
CSS0011692 Camellia sinensis var. sinensis HOM05D003720 ORTHO05D005312 4.4e-77 291.6 203 73.9
CSS0041174 Camellia sinensis var. sinensis HOM05D003720 ORTHO05D005312 4.4e-77 291.6 203 73.9
AUR62031297 Chenopodium quinoa HOM05D003720 ORTHO05D005312 4.4e-77 291.6 203 74.9
Prupe.7G234400 Prunus persica HOM05D003720 ORTHO05D005312 4.4e-77 291.6 203 74.4
CANSAT56G4488 Cannabis sativa HOM05D003720 ORTHO05D005312 5.7e-77 291.2 203 74.4
Thecc.09G115700 Theobroma cacao HOM05D003720 ORTHO05D005312 5.7e-77 291.2 203 75.4
Gohir.D06G058501 Gossypium hirsutum HOM05D003720 ORTHO05D005312 7.5e-77 290.8 203 74.4
Gorai.010G068600 Gossypium raimondii HOM05D003720 ORTHO05D005312 7.5e-77 290.8 203 74.4
MD02G1042600 Malus domestica HOM05D003720 ORTHO05D005312 9.7e-77 290.4 203 73.9
Atru.chr7.1286 Acer truncatum HOM05D003720 ORTHO05D005312 1.3e-76 290.0 203 73.9
PGR102G1985 Punica granatum HOM05D003720 ORTHO05D005312 1.3e-76 290.0 203 73.9
Ciclev10007224m.g Citrus clementina HOM05D003720 ORTHO05D005312 1.7e-76 289.7 203 73.9
Gohir.A06G060200 Gossypium hirsutum HOM05D003720 ORTHO05D005312 1.7e-76 289.7 203 74.4
Manes.16G064500 Manihot esculenta HOM05D003720 ORTHO05D005312 1.7e-76 289.7 203 74.4
RcHm_v2.0_Chr2g0089861 Rosa chinensis HOM05D003720 ORTHO05D005312 1.7e-76 289.7 203 73.4
EL10Ac8g19346 Beta vulgaris HOM05D003720 ORTHO05D005312 2.8e-76 288.9 203 74.4
Cpa.g.sc23.156 Carica papaya HOM05D003720 ORTHO05D005312 3.7e-76 288.5 202 74.3
FvH4_1g04290 Fragaria vesca HOM05D003720 ORTHO05D005312 3.7e-76 288.5 203 73.4
FAN19G2601 Fragaria x ananassa HOM05D003720 ORTHO05D005312 3.7e-76 288.5 203 73.4
FAN28G0537 Fragaria x ananassa HOM05D003720 ORTHO05D005312 3.7e-76 288.5 203 72.9
SGA_v2.0_scaffold45G17079 Striga asiatica HOM05D003720 ORTHO05D005312 3.7e-76 288.5 203 74.4
MSTRG.6069 Avicennia marina HOM05D003720 ORTHO05D005312 4.8e-76 288.1 203 73.9
FAN26G1450 Fragaria x ananassa HOM05D003720 ORTHO05D005312 4.8e-76 288.1 203 73.4
Nitab4.5_0000100g0300 Nicotiana tabacum HOM05D003720 ORTHO05D005312 4.8e-76 288.1 203 73.4
Rhsim03G0245400 Rhododendron simsii HOM05D003720 ORTHO05D005312 4.8e-76 288.1 203 72.4
MD15G1181200 Malus domestica HOM05D003720 ORTHO05D005312 6.3e-76 287.7 203 73.4
Nitab4.5_0002116g0040 Nicotiana tabacum HOM05D003720 ORTHO05D005312 6.3e-76 287.7 203 73.9
SalBow6G2056 Salvia bowleyana HOM05D003720 ORTHO05D005312 6.3e-76 287.7 203 74.4
Oeu002223.1 Olea europaea HOM05D003720 ORTHO05D005312 8.2e-76 287.3 203 72.9
TAR383G0813 Trochodendron aralioides HOM05D003720 ORTHO05D005312 8.2e-76 287.3 203 73.4
vmacro06189 Vaccinium macrocarpon HOM05D003720 ORTHO05D005312 1.1e-75 287.0 203 71.9
ATR0561G176 Amborella trichopoda HOM05D003720 ORTHO05D005312 1.4e-75 286.6 203 72.9
Cfa003295 Carpinus fangiana HOM05D003720 ORTHO05D005312 1.4e-75 286.6 203 73.4
Duzib168G1140 Durio zibethinus HOM05D003720 ORTHO05D005312 1.4e-75 286.6 203 73.9
Aqoxy7G01852 Aquilegia oxysepala HOM05D003720 ORTHO05D005312 1.8e-75 286.2 203 72.9
DCAR_028737 Daucus carota HOM05D003720 ORTHO05D005312 1.8e-75 286.2 203 72.9
Hma1.2p1_0245F.1_g101400 Hydrangea macrophylla HOM05D003720 ORTHO05D005312 1.8e-75 286.2 202 73.8
Potri.018G072600 Populus trichocarpa HOM05D003720 ORTHO05D005312 1.8e-75 286.2 203 73.4
PSO170G5328 Papaver somniferum HOM05D003720 ORTHO05D005312 2.4e-75 285.8 203 72.4
PSO357G0216 Papaver somniferum HOM05D003720 ORTHO05D005312 2.4e-75 285.8 203 72.4
QL02p086231 Quercus lobata HOM05D003720 ORTHO05D005312 2.4e-75 285.8 203 73.4
Sabra18G0064000 Salix brachista HOM05D003720 ORTHO05D005312 2.4e-75 285.8 203 72.9
Haze_25676 Corylus avellana HOM05D003720 ORTHO05D005312 4.1e-75 285.0 203 72.9
Sc08g0004790 Simmondsia chinensis HOM05D003720 ORTHO05D005312 4.1e-75 285.0 203 72.4
TWI63G0927 Tripterygium wilfordii HOM05D003720 ORTHO05D005312 4.1e-75 285.0 203 73.9
Migut.J01184 Erythranthe guttata HOM05D003720 ORTHO05D005312 5.3e-75 284.6 203 72.9
Os10g0575200 Oryza sativa ssp. japonica HOM05D003720 ORTHO05D005312 7.0e-75 284.3 203 72.4
CiPaw.03G235900 Carya illinoinensis HOM05D003720 ORTHO05D005312 9.1e-75 283.9 203 72.9
ClCG06G010450 Citrullus lanatus HOM05D003720 ORTHO05D005312 9.1e-75 283.9 203 72.9
PGSC0003DMG400013949 Solanum tuberosum HOM05D003720 ORTHO05D005312 9.1e-75 283.9 203 72.9
MELO3C025310.2 Cucumis melo HOM05D003720 ORTHO05D005312 1.6e-74 283.1 203 72.9
CsaV3_1G030910 Cucumis sativus L. HOM05D003720 ORTHO05D005312 2.0e-74 282.7 203 72.4
HanXRQChr10g0317421 Helianthus annuus HOM05D003720 ORTHO05D005312 2.0e-74 282.7 203 71.4
Solyc08g021920.4 Solanum lycopersicum HOM05D003720 ORTHO05D005312 2.0e-74 282.7 203 72.4
Sopen08g011820 Solanum pennellii HOM05D003720 ORTHO05D005312 2.0e-74 282.7 203 72.4
BcaC02g10846 Brassica carinata HOM05D003720 ORTHO05D005312 3.5e-74 282.0 195 73.8
BraA07t29508Z Brassica rapa HOM05D003720 ORTHO05D005312 3.5e-74 282.0 203 71.9
Aa31LG5G8890 Aethionema arabicum HOM05D003720 ORTHO05D005312 4.5e-74 281.6 203 73.4
CARHR119040 Cardamine hirsuta HOM05D003720 ORTHO05D005312 4.5e-74 281.6 203 73.4
Lsat_1_v5_gn_5_99761 Lactuca sativa HOM05D003720 ORTHO05D005312 5.9e-74 281.2 203 70.9
HPP92_014850 Vanilla planifolia HOM05D003720 ORTHO05D005312 1.0e-73 280.4 203 70.9
A07p17900 Brassica napus HOM05D003720 ORTHO05D005312 1.3e-73 280.0 203 71.4
C04p24570 Brassica napus HOM05D003720 ORTHO05D005312 1.3e-73 280.0 203 71.4
BolC4t23961H Brassica oleracea HOM05D003720 ORTHO05D005312 1.3e-73 280.0 203 71.4
ECA234G2971 Erigeron canadensis HOM05D003720 ORTHO05D005312 1.7e-73 279.6 203 70.4
Actinidia26424 Actinidia chinensis HOM05D003720 ORTHO05D005312 2.2e-73 279.3 203 70.9
CAN.G368.4 Capsicum annuum HOM05D003720 ORTHO05D005312 2.2e-73 279.3 203 71.9
AL4G20110 Arabidopsis lyrata HOM05D003720 ORTHO05D005312 2.9e-73 278.9 203 71.9
Carub.0004s0739 Capsella rubella HOM05D003720 ORTHO05D005312 2.9e-73 278.9 203 71.9
Thhalv10001876m.g Eutrema salsugineum HOM05D003720 ORTHO05D005312 6.5e-73 277.7 203 70.9
Gorai.009G022700 Gossypium raimondii HOM05D003720 ORTHO05D005312 6.5e-73 277.7 203 72.4
THA.LOC104809021 Tarenaya hassleriana HOM05D003720 ORTHO05D005312 6.5e-73 277.7 203 71.4
AT2G26890 Arabidopsis thaliana HOM05D003720 ORTHO05D005312 8.5e-73 277.3 203 71.4
Actinidia07451 Actinidia chinensis HOM05D003720 ORTHO05D005312 1.1e-72 276.9 203 70.4
Gohir.A05G021000 Gossypium hirsutum HOM05D003720 ORTHO05D005312 5.5e-72 274.6 203 71.9
Sp4g08590 Schrenkiella parvula HOM05D003720 ORTHO05D005312 1.2e-71 273.5 203 70.4
Lj7C641G5 Lonicera japonica HOM05D003720 ORTHO05D005312 2.1e-71 272.7 237 63.7
Sed0024242 Sechium edule HOM05D003720 ORTHO05D005312 2.1e-71 272.7 203 70.4
arahy.Tifrunner.gnm1.ann1.CMVH84 Arachis hypogaea HOM05D003720 ORTHO05D005312 2.7e-71 272.3 174 83.3
Zm00001eb390320 Zea mays HOM05D003720 ORTHO05D005312 4.7e-71 271.6 202 69.3
arahy.Tifrunner.gnm1.ann1.HL09EZ Arachis hypogaea HOM05D003720 ORTHO05D005312 1.4e-70 270.0 174 82.8
arahy.Tifrunner.gnm1.ann1.NRTP45 Arachis hypogaea HOM05D003720 ORTHO05D005312 1.4e-70 270.0 174 82.8
arahy.Tifrunner.gnm1.ann1.QKW76S Arachis hypogaea HOM05D003720 ORTHO05D005312 1.8e-70 269.6 174 82.8
arahy.Tifrunner.gnm1.ann1.GFGC5E Arachis hypogaea HOM05D003720 ORTHO05D005312 1.2e-69 266.9 174 81.6
SHI03184 Sapria himalayana HOM05D003720 ORTHO05D005312 1.2e-69 266.9 202 68.3
unitig_22.g6632 Utricularia gibba HOM05D003720 ORTHO05D005312 4.8e-68 261.5 183 74.3
SEGI_35777 Sequoiadendron giganteum HOM05D003720 ORTHO05D005312 7.0e-67 257.7 203 66.0
CDE06G2493 Ceratophyllum demersum HOM05D003720 ORTHO05D005312 3.5e-66 255.4 183 73.8
Mapoly0043s0138 Marchantia polymorpha HOM05D003720 ORTHO05D005312 2.3e-65 252.7 203 64.5
AagrBONN_evm.TU.Sc2ySwM_368.1081 Anthoceros agrestis HOM05D003720 ORTHO05D005312 2.9e-65 252.3 203 63.5
Pp3c13_3460 Physcomitrium patens HOM05D003720 ORTHO05D005312 1.1e-64 250.4 203 63.5
SMO358G0126 Selaginella moellendorffii HOM05D003720 ORTHO05D005312 5.5e-64 248.1 203 63.5
Pp3c4_24650 Physcomitrium patens HOM05D003720 ORTHO05D005312 4.7e-63 245.0 203 61.1
CDE07G1594 Ceratophyllum demersum HOM05D003720 ORTHO05D005312 1.8e-62 243.0 174 73.0
CBR_g4479 Chara braunii HOM05D003720 ORTHO05D005312 7.0e-59 231.1 193 60.6
Gohir.D05G022400 Gossypium hirsutum HOM05D003720 ORTHO05D005312 2.5e-56 222.6 203 61.6
arahy.Tifrunner.gnm1.ann1.UX9YIA Arachis hypogaea HOM05D003720 ORTHO05D005312 3.7e-44 182.2 136 78.7
CDE06G1063 Ceratophyllum demersum HOM05D003720 ORTHO05D005312 6.4e-44 181.4 186 55.9
arahy.Tifrunner.gnm1.ann1.JURE59 Arachis hypogaea HOM05D003720 ORTHO05D005312 3.9e-41 172.2 119 79.0
COL.COLO4_34940 Corchorus olitorius HOM05D003720 ORTHO05D005312 2.3e-38 162.9 131 71.8
PRCOL_00006435 Prasinoderma coloniale HOM05D003720 ORTHO05D005312 2.2e-36 156.4 205 41.0
arahy.Tifrunner.gnm1.ann1.H6EN9A Arachis hypogaea HOM05D003720 ORTHO05D005312 3.2e-35 152.5 108 80.6
Cre12.g486209 Chlamydomonas reinhardtii HOM05D003720 ORTHO05D005312 6.0e-34 148.3 203 41.9


User provided reference genes

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