Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.XZQ8AB Arachis hypogaea HOM05D007224 ORTHO05D009169 2.1e-130 469.2 261 100.0
arahy.Tifrunner.gnm1.ann1.TQ0B6U Arachis hypogaea HOM05D007224 ORTHO05D009169 1.8e-105 386.3 227 91.2
Lj5g0004917 Lotus japonicus HOM05D007224 ORTHO05D009169 3.7e-66 255.8 234 65.0
Ca_06981_v3 Cicer arietinum L. HOM05D007224 ORTHO05D009169 4.8e-66 255.4 210 65.7
VMungo0647G2475 Vigna mungo HOM05D007224 ORTHO05D009169 6.3e-66 255.0 224 61.6
Glyma.17G232300 Glycine max HOM05D007224 ORTHO05D009169 1.2e-64 250.8 213 68.1
Lalb_Chr22g0355811 Lupinus albus HOM05D007224 ORTHO05D009169 4.5e-64 248.8 223 63.2
Phvul.001G031100 Phaseolus vulgaris HOM05D007224 ORTHO05D009169 1.0e-63 247.7 208 66.3
Medtr1g017450 Medicago truncatula HOM05D007224 ORTHO05D009169 2.9e-63 246.1 210 63.8
TPR.G13169 Trifolium pratense HOM05D007224 ORTHO05D009169 1.1e-62 244.2 200 65.5
Psat6g017040 Pisum sativum HOM05D007224 ORTHO05D009169 8.0e-61 238.0 208 63.0
Atru.chr13.874 Acer truncatum HOM05D007224 ORTHO05D009169 1.6e-53 213.8 246 50.4
CiPaw.07G171700 Carya illinoinensis HOM05D007224 ORTHO05D009169 6.1e-53 211.8 211 55.9
RcHm_v2.0_Chr6g0310081 Rosa chinensis HOM05D007224 ORTHO05D009169 8.0e-53 211.5 171 62.0
Cfa013733 Carpinus fangiana HOM05D007224 ORTHO05D009169 5.2e-52 208.8 211 61.6
Haze_22381 Corylus avellana HOM05D007224 ORTHO05D009169 1.2e-51 207.6 211 59.2
ClCG08G016710 Citrullus lanatus HOM05D007224 ORTHO05D009169 1.5e-51 207.2 199 55.8
CANSAT56G0920 Cannabis sativa HOM05D007224 ORTHO05D009169 2.0e-51 206.8 170 65.3
Carub.0001s3542 Capsella rubella HOM05D007224 ORTHO05D009169 2.6e-51 206.5 173 59.0
CsaV3_2G025920 Cucumis sativus L. HOM05D007224 ORTHO05D009169 2.6e-51 206.5 208 54.3
TWI12G0175 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 3.4e-51 206.1 171 62.6
AL1G52590 Arabidopsis lyrata HOM05D007224 ORTHO05D009169 7.5e-51 204.9 173 59.0
AT1G44920 Arabidopsis thaliana HOM05D007224 ORTHO05D009169 2.2e-50 203.4 173 60.1
TWI56G1112 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 2.8e-50 203.0 172 61.6
MELO3C010785.2 Cucumis melo HOM05D007224 ORTHO05D009169 3.7e-50 202.6 208 54.3
Duzib116G0584 Durio zibethinus HOM05D007224 ORTHO05D009169 4.8e-50 202.2 204 53.9
GSVIVG01009296001 Vitis vinifera HOM05D007224 ORTHO05D009169 1.1e-49 201.1 220 50.0
FAN15G3290 Fragaria x ananassa HOM05D007224 ORTHO05D009169 4.1e-49 199.1 172 59.3
THA.LOC104799830 Tarenaya hassleriana HOM05D007224 ORTHO05D009169 5.4e-49 198.7 172 59.9
FAN27G0962 Fragaria x ananassa HOM05D007224 ORTHO05D009169 7.0e-49 198.4 172 58.7
FAN20G0095 Fragaria x ananassa HOM05D007224 ORTHO05D009169 9.1e-49 198.0 172 58.1
Hund05274 Selenicereus undatus HOM05D007224 ORTHO05D009169 9.1e-49 198.0 172 62.8
A10p07160 Brassica napus HOM05D007224 ORTHO05D009169 2.7e-48 196.4 172 56.4
BcaC08g42889 Brassica carinata HOM05D007224 ORTHO05D009169 3.5e-48 196.1 224 47.3
C06p01100 Brassica napus HOM05D007224 ORTHO05D009169 3.5e-48 196.1 244 44.7
Gorai.010G028000 Gossypium raimondii HOM05D007224 ORTHO05D009169 4.5e-48 195.7 226 50.0
Gohir.D06G023300 Gossypium hirsutum HOM05D007224 ORTHO05D009169 5.9e-48 195.3 172 57.0
TAR628G0831 Trochodendron aralioides HOM05D007224 ORTHO05D009169 7.7e-48 194.9 231 51.9
Ciclev10002194m.g Citrus clementina HOM05D007224 ORTHO05D009169 1.0e-47 194.5 205 53.7
BcaB07g33899 Brassica carinata HOM05D007224 ORTHO05D009169 1.3e-47 194.1 170 60.6
Thhalv10011734m.g Eutrema salsugineum HOM05D007224 ORTHO05D009169 1.7e-47 193.7 173 56.1
Gohir.A06G026200 Gossypium hirsutum HOM05D007224 ORTHO05D009169 1.7e-47 193.7 222 50.9
PGR083G2708 Punica granatum HOM05D007224 ORTHO05D009169 2.2e-47 193.4 165 63.6
CARHR036150 Cardamine hirsuta HOM05D007224 ORTHO05D009169 5.0e-47 192.2 173 56.1
MD08G1077300 Malus domestica HOM05D007224 ORTHO05D009169 6.5e-47 191.8 171 58.5
Prupe.1G418700 Prunus persica HOM05D007224 ORTHO05D009169 8.5e-47 191.4 223 56.1
Sp1g33790 Schrenkiella parvula HOM05D007224 ORTHO05D009169 1.1e-46 191.0 173 55.5
COL.COLO4_28456 Corchorus olitorius HOM05D007224 ORTHO05D009169 2.5e-46 189.9 236 49.2
FvH4_2g32650 Fragaria vesca HOM05D007224 ORTHO05D009169 3.2e-46 189.5 165 58.8
Ah.11g039150 Amaranthus hybridus HOM05D007224 ORTHO05D009169 5.5e-46 188.7 171 59.1
FAN24G0100 Fragaria x ananassa HOM05D007224 ORTHO05D009169 5.5e-46 188.7 162 59.3
Sc26g0004240 Simmondsia chinensis HOM05D007224 ORTHO05D009169 5.5e-46 188.7 171 57.3
CAN.G1239.16 Capsicum annuum HOM05D007224 ORTHO05D009169 7.2e-46 188.3 172 55.8
MD15G1064800 Malus domestica HOM05D007224 ORTHO05D009169 9.4e-46 188.0 171 56.1
Rhsim06G0064800 Rhododendron simsii HOM05D007224 ORTHO05D009169 9.4e-46 188.0 166 59.6
Thecc.08G084200 Theobroma cacao HOM05D007224 ORTHO05D009169 9.4e-46 188.0 214 54.2
Actinidia10224 Actinidia chinensis HOM05D007224 ORTHO05D009169 1.2e-45 187.6 206 51.0
BraA10t42965Z Brassica rapa HOM05D007224 ORTHO05D009169 1.6e-45 187.2 189 51.9
DCAR_009866 Daucus carota HOM05D007224 ORTHO05D009169 6.1e-45 185.3 216 49.1
MBI16_g06074_MAGBIO Magnolia biondii HOM05D007224 ORTHO05D009169 6.1e-45 185.3 171 61.4
PSO541G3785 Papaver somniferum HOM05D007224 ORTHO05D009169 1.4e-44 184.1 165 57.0
Manes.18G049850 Manihot esculenta HOM05D007224 ORTHO05D009169 1.8e-44 183.7 251 49.8
Lj4A752T19 Lonicera japonica HOM05D007224 ORTHO05D009169 5.2e-44 182.2 173 59.0
Sopen04g031100 Solanum pennellii HOM05D007224 ORTHO05D009169 6.8e-44 181.8 168 54.2
Aa31LG7G10090 Aethionema arabicum HOM05D007224 ORTHO05D009169 8.8e-44 181.4 199 48.7
CDE04G2175 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 8.8e-44 181.4 227 45.8
EL10Ac1g02348 Beta vulgaris HOM05D007224 ORTHO05D009169 1.2e-43 181.0 173 60.1
BolC6t35243H Brassica oleracea HOM05D007224 ORTHO05D009169 1.2e-43 181.0 242 43.0
PGSC0003DMG400004920 Solanum tuberosum HOM05D007224 ORTHO05D009169 1.2e-43 181.0 170 54.1
PSO675G4824 Papaver somniferum HOM05D007224 ORTHO05D009169 1.5e-43 180.6 165 55.8
Solyc04g077500.4 Solanum lycopersicum HOM05D007224 ORTHO05D009169 1.5e-43 180.6 173 53.8
CSS0049759 Camellia sinensis var. sinensis HOM05D007224 ORTHO05D009169 2.0e-43 180.3 163 57.1
Nitab4.5_0001494g0030 Nicotiana tabacum HOM05D007224 ORTHO05D009169 9.8e-43 177.9 172 54.1
Dinv44928 Davidia involucrata HOM05D007224 ORTHO05D009169 2.2e-42 176.8 166 62.7
Nn5g30669 Nelumbo nucifera HOM05D007224 ORTHO05D009169 2.2e-42 176.8 230 48.7
Potri.002G114900 Populus trichocarpa HOM05D007224 ORTHO05D009169 6.3e-42 175.3 202 54.0
Aqoxy6G02448 Aquilegia oxysepala HOM05D007224 ORTHO05D009169 1.4e-41 174.1 172 59.3
Lsat_1_v5_gn_0_47281 Lactuca sativa HOM05D007224 ORTHO05D009169 3.1e-41 172.9 206 48.1
SalBow7G4028 Salvia bowleyana HOM05D007224 ORTHO05D009169 5.4e-41 172.2 173 56.6
HanXRQChr04g0110471 Helianthus annuus HOM05D007224 ORTHO05D009169 7.0e-41 171.8 173 52.0
Peaxi162Scf01161g00120 Petunia axillaris HOM05D007224 ORTHO05D009169 1.6e-40 170.6 173 56.1
Zm00001eb056020 Zea mays HOM05D007224 ORTHO05D009169 2.0e-40 170.2 176 50.0
SGA_v2.0_scaffold238G43907 Striga asiatica HOM05D007224 ORTHO05D009169 3.5e-40 169.5 220 50.5
vmacro21415 Vaccinium macrocarpon HOM05D007224 ORTHO05D009169 1.3e-39 167.5 181 51.4
unitig_52.g17426 Utricularia gibba HOM05D007224 ORTHO05D009169 1.7e-39 167.2 163 53.4
Nitab4.5_0010252g0010 Nicotiana tabacum HOM05D007224 ORTHO05D009169 2.3e-39 166.8 171 56.7
Migut.C00453 Erythranthe guttata HOM05D007224 ORTHO05D009169 2.9e-39 166.4 165 59.4
MSTRG.22207 Avicennia marina HOM05D007224 ORTHO05D009169 6.6e-39 165.2 171 52.0
Os03g0729100 Oryza sativa ssp. japonica HOM05D007224 ORTHO05D009169 2.1e-37 160.2 175 47.4
Cc10_g07670 Coffea canephora HOM05D007224 ORTHO05D009169 3.6e-37 159.5 175 54.3
Sabra02G0090900 Salix brachista HOM05D007224 ORTHO05D009169 6.1e-37 158.7 258 42.6
Actinidia19293 Actinidia chinensis HOM05D007224 ORTHO05D009169 1.8e-36 157.1 122 65.6
Haze_22389 Corylus avellana HOM05D007224 ORTHO05D009169 6.8e-36 155.2 171 57.9
ATR0739G089 Amborella trichopoda HOM05D007224 ORTHO05D009169 4.4e-35 152.5 171 49.7
HPP92_007712 Vanilla planifolia HOM05D007224 ORTHO05D009169 2.2e-34 150.2 221 40.7
CDE07G0245 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 3.2e-33 146.4 136 52.2
Sed0020426 Sechium edule HOM05D007224 ORTHO05D009169 5.9e-32 142.1 175 45.7
Mapoly0039s0075 Marchantia polymorpha HOM05D007224 ORTHO05D009169 1.0e-28 131.3 208 38.5
SMO147G0155 Selaginella moellendorffii HOM05D007224 ORTHO05D009169 4.0e-28 129.4 160 43.1
Pp3c6_15140 Physcomitrium patens HOM05D007224 ORTHO05D009169 9.8e-27 124.8 148 43.2
ECA232G4225 Erigeron canadensis HOM05D007224 ORTHO05D009169 7.8e-24 115.2 116 48.3
Glyma.14G089100 Glycine max HOM05D007224 ORTHO05D009169 4.3e-22 109.4 71 74.6
AUR62024535 Chenopodium quinoa HOM05D007224 ORTHO05D009169 8.1e-21 105.1 81 63.0
CBR_g45556 Chara braunii HOM05D000019 ORTHO05D000002 2.3e-20 103.6 161 36.0
Cpa.g.sc2059.2 Carica papaya HOM05D007224 ORTHO05D009169 2.9e-18 96.7 124 47.6
AUR62033890 Chenopodium quinoa HOM05D007224 ORTHO05D009169 6.4e-18 95.5 148 41.9
Cre13.g569250 Chlamydomonas reinhardtii HOM05D007224 ORTHO05D009169 2.4e-17 93.6 150 40.0
Zm00001eb035950 Zea mays HOM05D007224 ORTHO05D009169 1.9e-14 84.0 76 51.3
Zm00001eb141580 Zea mays HOM05D007224 ORTHO05D445531 1.8e-12 77.4 137 37.2
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 1.0e-07 61.6 42 69.0


User provided reference genes

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