Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.XY21PC Arachis hypogaea HOM05D004197 ORTHO05D004975 4.7e-70 267.7 131 100.0
arahy.Tifrunner.gnm1.ann1.4JR04K Arachis hypogaea HOM05D004197 ORTHO05D004975 8.4e-51 203.8 131 79.4
arahy.Tifrunner.gnm1.ann1.5DCW4K Arachis hypogaea HOM05D004197 ORTHO05D004975 8.4e-51 203.8 131 79.4
arahy.Tifrunner.gnm1.ann1.E9H45Q Arachis hypogaea HOM05D004197 ORTHO05D004975 1.1e-50 203.4 130 79.2
Glyma.17G164900 Glycine max HOM05D004197 ORTHO05D004975 8.1e-46 187.2 131 71.0
VMungo0251G3068 Vigna mungo HOM05D004197 ORTHO05D004975 1.4e-45 186.4 131 71.0
arahy.Tifrunner.gnm1.ann1.60591L Arachis hypogaea HOM05D004197 ORTHO05D004975 5.2e-45 184.5 138 73.2
Eucgr.G02225 Eucalyptus grandis HOM05D004197 ORTHO05D004975 8.9e-45 183.7 131 70.2
Glyma.05G102000 Glycine max HOM05D004197 ORTHO05D004975 8.9e-45 183.7 131 70.2
Phvul.003G238300 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 8.9e-45 183.7 131 69.5
Thecc.04G166300 Theobroma cacao HOM05D004197 ORTHO05D004975 1.2e-44 183.3 131 70.2
CiPaw.11G096400 Carya illinoinensis HOM05D004197 ORTHO05D004975 2.0e-44 182.6 131 69.5
Duzib151G0052 Durio zibethinus HOM05D004197 ORTHO05D004975 4.4e-44 181.4 131 70.2
GSVIVG01038138001 Vitis vinifera HOM05D004197 ORTHO05D004975 4.4e-44 181.4 131 70.2
Gohir.A10G143100 Gossypium hirsutum HOM05D004197 ORTHO05D004975 9.9e-44 180.3 131 68.7
Gorai.011G136700 Gossypium raimondii HOM05D004197 ORTHO05D004975 9.9e-44 180.3 131 68.7
Gorai.012G053000 Gossypium raimondii HOM05D004197 ORTHO05D004975 9.9e-44 180.3 131 68.7
Atru.chr12.1293 Acer truncatum HOM05D004197 ORTHO05D004975 1.7e-43 179.5 131 67.9
Gohir.A05G367700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 2.9e-43 178.7 131 67.9
Gohir.D10G123800 Gossypium hirsutum HOM05D004197 ORTHO05D004975 3.8e-43 178.3 131 67.9
TWI34G1638 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 3.8e-43 178.3 144 63.9
Duzib212G0574 Durio zibethinus HOM05D004197 ORTHO05D004975 4.9e-43 177.9 131 68.7
Gohir.D04G047600 Gossypium hirsutum HOM05D004197 ORTHO05D004975 4.9e-43 177.9 131 67.9
Hma1.2p1_0307F.1_g119895 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 4.9e-43 177.9 131 67.9
CiPaw.12G066300 Carya illinoinensis HOM05D004197 ORTHO05D004975 8.4e-43 177.2 131 66.4
PGR142G4086 Punica granatum HOM05D004197 ORTHO05D004975 8.4e-43 177.2 131 67.9
Atru.chr4.2919 Acer truncatum HOM05D004197 ORTHO05D004975 1.1e-42 176.8 131 67.2
CSS0039414 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 1.1e-42 176.8 131 67.2
CSS0047181 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 1.1e-42 176.8 131 67.2
Lalb_Chr04g0253841 Lupinus albus HOM05D004197 ORTHO05D004975 1.1e-42 176.8 131 67.9
HPP92_007604 Vanilla planifolia HOM05D004197 ORTHO05D004975 1.1e-42 176.8 131 67.2
TWI32G1250 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 1.4e-42 176.4 131 66.4
ATR0733G162 Amborella trichopoda HOM05D004197 ORTHO05D004975 1.9e-42 176.0 131 67.9
Cfa015042 Carpinus fangiana HOM05D004197 ORTHO05D004975 1.9e-42 176.0 131 66.4
Ca_23424_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 1.9e-42 176.0 131 68.7
QL10p055721 Quercus lobata HOM05D004197 ORTHO05D004975 1.9e-42 176.0 130 67.7
Dinv33200 Davidia involucrata HOM05D004197 ORTHO05D004975 2.4e-42 175.6 130 68.5
Lj1g0017974 Lotus japonicus HOM05D004197 ORTHO05D004975 4.2e-42 174.9 131 67.9
AUR62023799 Chenopodium quinoa HOM05D004197 ORTHO05D004975 5.4e-42 174.5 131 67.2
Psat1g223520 Pisum sativum HOM05D004197 ORTHO05D004975 5.4e-42 174.5 131 65.6
Sed0002539 Sechium edule HOM05D004197 ORTHO05D004975 5.4e-42 174.5 131 67.2
CARHR170020 Cardamine hirsuta HOM05D004197 ORTHO05D004975 7.1e-42 174.1 131 65.6
Aa31LG10G13940 Aethionema arabicum HOM05D004197 ORTHO05D004975 9.3e-42 173.7 131 65.6
AL5G41720 Arabidopsis lyrata HOM05D004197 ORTHO05D004975 9.3e-42 173.7 131 65.6
Carub.0005s2637 Capsella rubella HOM05D004197 ORTHO05D004975 9.3e-42 173.7 131 65.6
AT3G59650 Arabidopsis thaliana HOM05D004197 ORTHO05D004975 1.2e-41 173.3 131 64.9
Phvul.010G124900 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 1.2e-41 173.3 122 71.3
CDE02G1869 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 1.6e-41 172.9 130 63.8
Lalb_Chr10g0101191 Lupinus albus HOM05D004197 ORTHO05D004975 1.6e-41 172.9 131 64.1
Ca_10539_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 2.1e-41 172.6 131 66.4
Medtr8g022770 Medicago truncatula HOM05D004197 ORTHO05D004975 2.7e-41 172.2 131 65.6
Thhalv10006316m.g Eutrema salsugineum HOM05D004197 ORTHO05D004975 3.5e-41 171.8 131 65.6
Nn1g09691 Nelumbo nucifera HOM05D004197 ORTHO05D004975 3.5e-41 171.8 131 64.9
Cpa.g.sc10.180 Carica papaya HOM05D004197 ORTHO05D004975 4.6e-41 171.4 131 65.6
Rhsim03G0176800 Rhododendron simsii HOM05D004197 ORTHO05D004975 6.0e-41 171.0 130 65.4
Ah.13g073520 Amaranthus hybridus HOM05D004197 ORTHO05D004975 1.0e-40 170.2 131 64.9
BcaC07g40496 Brassica carinata HOM05D004197 ORTHO05D004975 1.0e-40 170.2 131 64.9
A09p51920 Brassica napus HOM05D004197 ORTHO05D004975 1.0e-40 170.2 131 64.9
C08p34650 Brassica napus HOM05D004197 ORTHO05D004975 1.0e-40 170.2 131 64.9
BolC8t51067H Brassica oleracea HOM05D004197 ORTHO05D004975 1.0e-40 170.2 131 64.9
BraA09t40628Z Brassica rapa HOM05D004197 ORTHO05D004975 1.0e-40 170.2 131 64.9
TPR.G16667 Trifolium pratense HOM05D004197 ORTHO05D004975 1.0e-40 170.2 130 64.6
BcaC08g44998 Brassica carinata HOM05D004197 ORTHO05D004975 1.3e-40 169.9 131 64.9
A07p24720 Brassica napus HOM05D000455 ORTHO05D000434 1.3e-40 169.9 131 64.9
C06p26290 Brassica napus HOM05D000455 ORTHO05D000434 1.3e-40 169.9 131 64.9
BolC6t37793H Brassica oleracea HOM05D004197 ORTHO05D004975 1.3e-40 169.9 131 64.9
BraA07t30117Z Brassica rapa HOM05D004197 ORTHO05D004975 1.3e-40 169.9 131 64.9
Psat4g166320 Pisum sativum HOM05D004197 ORTHO05D004975 1.3e-40 169.9 131 63.4
Prupe.1G206900 Prunus persica HOM05D004197 ORTHO05D004975 1.3e-40 169.9 131 64.9
Sp5g03530 Schrenkiella parvula HOM05D004197 ORTHO05D004975 1.3e-40 169.9 131 64.9
BcaB02g07455 Brassica carinata HOM05D004197 ORTHO05D004975 1.7e-40 169.5 131 64.9
ClCG07G015230 Citrullus lanatus HOM05D004197 ORTHO05D004975 3.0e-40 168.7 131 63.4
EL10Ac6g15364 Beta vulgaris HOM05D004197 ORTHO05D004975 5.1e-40 167.9 131 63.4
Aqoxy7G00569 Aquilegia oxysepala HOM05D004197 ORTHO05D004975 8.7e-40 167.2 131 63.4
CsaV3_4G002820 Cucumis sativus L. HOM05D004197 ORTHO05D004975 8.7e-40 167.2 131 61.8
Ciclev10022904m.g Citrus clementina HOM05D004197 ORTHO05D004975 1.1e-39 166.8 131 63.4
THA.LOC104804007 Tarenaya hassleriana HOM05D004197 ORTHO05D004975 1.5e-39 166.4 131 63.4
Os03g0207250 Oryza sativa ssp. japonica HOM05D004197 ORTHO05D004975 3.3e-39 165.2 131 61.8
PSO832G1844 Papaver somniferum HOM05D004197 ORTHO05D004975 3.3e-39 165.2 130 63.1
CAN.G525.23 Capsicum annuum HOM05D004197 ORTHO05D004975 4.3e-39 164.9 131 62.6
FvH4_7g06200 Fragaria vesca HOM05D004197 ORTHO05D004975 4.3e-39 164.9 131 63.4
Manes.06G021100 Manihot esculenta HOM05D004197 ORTHO05D004975 4.3e-39 164.9 131 62.6
RcHm_v2.0_Chr1g0333831 Rosa chinensis HOM05D004197 ORTHO05D004975 5.6e-39 164.5 131 62.6
CANSAT80G2644 Cannabis sativa HOM05D004197 ORTHO05D004975 9.6e-39 163.7 131 61.8
Hund04335 Selenicereus undatus HOM05D004197 ORTHO05D004975 9.6e-39 163.7 131 62.6
FAN01G1948 Fragaria x ananassa HOM05D004197 ORTHO05D004975 1.3e-38 163.3 131 62.6
FAN06G1493 Fragaria x ananassa HOM05D004197 ORTHO05D004975 1.3e-38 163.3 131 62.6
Oeu016610.1 Olea europaea HOM05D004197 ORTHO05D004975 1.3e-38 163.3 131 63.4
Peaxi162Scf00196g00222 Petunia axillaris HOM05D004197 ORTHO05D004975 1.3e-38 163.3 131 61.8
EL10Ac3g06082 Beta vulgaris HOM05D004197 ORTHO05D004975 1.6e-38 162.9 131 61.8
MELO3C017759.2 Cucumis melo HOM05D004197 ORTHO05D004975 2.1e-38 162.5 131 61.1
Migut.F01587 Erythranthe guttata HOM05D004197 ORTHO05D004975 2.1e-38 162.5 131 62.6
Sp2g07880 Schrenkiella parvula HOM05D004197 ORTHO05D004975 2.1e-38 162.5 131 62.6
FAN03G3355 Fragaria x ananassa HOM05D004197 ORTHO05D004975 2.8e-38 162.2 131 61.8
SalBow6G6028 Salvia bowleyana HOM05D004197 ORTHO05D004975 3.6e-38 161.8 129 62.8
PSO017G5565 Papaver somniferum HOM05D004197 ORTHO05D004975 4.8e-38 161.4 130 61.5
PSO675G0737 Papaver somniferum HOM05D004197 ORTHO05D004975 4.8e-38 161.4 130 61.5
Nitab4.5_0007872g0010 Nicotiana tabacum HOM05D004197 ORTHO05D004975 6.2e-38 161.0 131 60.3
Solyc04g014390.3 Solanum lycopersicum HOM05D004197 ORTHO05D004975 8.1e-38 160.6 131 61.1
Sopen04g006520 Solanum pennellii HOM05D004197 ORTHO05D004975 8.1e-38 160.6 131 61.1
TAR362G0244 Trochodendron aralioides HOM05D000090 ORTHO05D001584 8.1e-38 160.6 122 66.4
Zm00001eb400580 Zea mays HOM05D004197 ORTHO05D004975 8.1e-38 160.6 131 60.3
MD08G1230600 Malus domestica HOM05D004197 ORTHO05D004975 2.4e-37 159.1 128 60.9
Nitab4.5_0000902g0310 Nicotiana tabacum HOM05D004197 ORTHO05D004975 3.1e-37 158.7 131 59.5
PSO591G0183 Papaver somniferum HOM05D004197 ORTHO05D004975 3.1e-37 158.7 130 60.0
MSTRG.27564 Avicennia marina HOM05D004197 ORTHO05D004975 5.3e-37 157.9 131 61.1
QL04p073242 Quercus lobata HOM05D004197 ORTHO05D004975 5.3e-37 157.9 130 60.8
Potri.013G126200 Populus trichocarpa HOM05D004197 ORTHO05D004975 9.0e-37 157.1 131 60.3
Lsat_1_v5_gn_6_33001 Lactuca sativa HOM05D004197 ORTHO05D004975 1.2e-36 156.8 131 63.4
PGSC0003DMG401023624 Solanum tuberosum HOM05D004197 ORTHO05D004975 1.2e-36 156.8 131 60.3
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 2.0e-36 156.0 121 62.8
ECA240G1468 Erigeron canadensis HOM05D004197 ORTHO05D004975 2.0e-36 156.0 131 61.1
unitig_899.g14470 Utricularia gibba HOM05D004197 ORTHO05D004975 2.0e-36 156.0 131 58.8
HanXRQChr10g0286001 Helianthus annuus HOM05D004197 ORTHO05D004975 2.6e-36 155.6 131 61.8
Cc02_g26370 Coffea canephora HOM05D004197 ORTHO05D004975 3.4e-36 155.2 131 61.1
TAR629G0957 Trochodendron aralioides HOM05D004197 ORTHO05D004975 3.4e-36 155.2 121 66.1
Actinidia11444 Actinidia chinensis HOM05D005056 ORTHO05D006487 4.4e-36 154.8 121 62.8
Gorai.004G083000 Gossypium raimondii HOM05D004197 ORTHO05D004975 5.8e-36 154.5 94 78.7
ECA247G1539 Erigeron canadensis HOM05D004197 ORTHO05D004975 9.9e-36 153.7 131 61.1
Gohir.D08G078000 Gossypium hirsutum HOM05D004197 ORTHO05D004975 9.9e-36 153.7 99 73.7
Lsat_1_v5_gn_5_190681 Lactuca sativa HOM05D004197 ORTHO05D004975 2.9e-35 152.1 131 61.1
Gorai.011G081000 Gossypium raimondii HOM05D004197 ORTHO05D004975 6.4e-35 151.0 91 79.1
Gohir.D10G075200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.1e-34 150.2 91 78.0
Cc03_g14030 Coffea canephora HOM05D004197 ORTHO05D004975 1.4e-34 149.8 131 61.1
Gorai.005G151300 Gossypium raimondii HOM05D004197 ORTHO05D004975 5.4e-34 147.9 91 75.8
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 5.4e-34 147.9 93 77.4
Gohir.D02G135200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 7.1e-34 147.5 91 76.9
Atru.chr12.1301 Acer truncatum HOM05D004197 ORTHO05D004975 1.2e-33 146.7 91 75.8
QL04p093649 Quercus lobata HOM05D004197 ORTHO05D004975 3.5e-33 145.2 122 59.8
Atru.chr12.1273 Acer truncatum HOM05D004197 ORTHO05D004975 6.0e-33 144.4 98 70.4
AUR62002389 Chenopodium quinoa HOM05D004197 ORTHO05D004975 7.9e-33 144.1 93 75.3
FAN24G1973 Fragaria x ananassa HOM05D004197 ORTHO05D004975 2.3e-32 142.5 121 60.3
FvH4_2g13530 Fragaria vesca HOM05D004197 ORTHO05D004975 3.9e-32 141.7 123 60.2
SGA_v2.0_scaffold49G18240 Striga asiatica HOM05D004197 ORTHO05D004975 1.6e-30 136.3 121 59.5
Rhsim02G0084000 Rhododendron simsii HOM05D004197 ORTHO05D004975 2.1e-30 136.0 86 72.1
TAR493G0004 Trochodendron aralioides HOM05D004197 ORTHO05D004975 2.1e-30 136.0 117 62.4
Zm00001eb007240 Zea mays HOM05D004197 ORTHO05D004975 2.8e-30 135.6 91 69.2
Mapoly0027s0066 Marchantia polymorpha HOM05D004197 ORTHO05D004975 1.1e-29 133.7 131 51.9
Lj3g0000340 Lotus japonicus HOM05D004197 ORTHO05D004975 1.4e-29 133.3 131 55.7
SalBow2G3321 Salvia bowleyana HOM05D004197 ORTHO05D004975 1.8e-29 132.9 89 73.0
HanXRQChr09g0264591 Helianthus annuus HOM05D004197 ORTHO05D004975 3.1e-29 132.1 95 69.5
SEGI_18755 Sequoiadendron giganteum HOM05D004197 ORTHO05D004975 4.0e-29 131.7 131 49.6
DCAR_029674 Daucus carota HOM05D004197 ORTHO05D004975 1.2e-28 130.2 91 67.0
TPR.G31074 Trifolium pratense HOM05D004197 ORTHO05D006502 1.5e-28 129.8 93 67.7
CARHR099320 Cardamine hirsuta HOM05D004197 ORTHO05D004975 3.4e-28 128.6 111 60.4
DCAR_009572 Daucus carota HOM05D004197 ORTHO05D004975 5.8e-28 127.9 91 65.9
Gohir.D08G220700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 9.9e-28 127.1 76 80.3
C04p24770 Brassica napus HOM05D004197 ORTHO05D004975 3.8e-27 125.2 121 57.9
BolC4t23981H Brassica oleracea HOM05D004197 ORTHO05D004975 3.8e-27 125.2 121 57.9
SHI24203 Sapria himalayana HOM05D004197 ORTHO05D004975 4.9e-27 124.8 133 46.6
BcaC02g10824 Brassica carinata HOM05D004197 ORTHO05D004975 3.2e-26 122.1 121 57.0
Pp3c1_20100 Physcomitrium patens HOM05D004197 ORTHO05D004975 5.5e-26 121.3 131 45.0
Sabra13G0105500 Salix brachista HOM05D004197 ORTHO05D004975 2.7e-25 119.0 171 42.7
unitig_736.g22525 Utricularia gibba HOM05D000398 ORTHO05D000551 5.3e-21 104.8 97 53.6
Glyma.07G044001 Glycine max HOM05D004197 ORTHO05D004975 2.0e-20 102.8 91 60.4
arahy.Tifrunner.gnm1.ann1.GGUP18 Arachis hypogaea HOM05D004197 ORTHO05D004975 4.5e-20 101.7 73 71.2
Peaxi162Scf00474g00723 Petunia axillaris HOM05D004197 ORTHO05D004975 4.5e-20 101.7 131 45.0
COL.COLO4_08144 Corchorus olitorius HOM05D004197 ORTHO05D004975 4.2e-18 95.1 73 64.4
SMO347G0376 Selaginella moellendorffii HOM05D004197 ORTHO05D004975 1.6e-17 93.2 129 40.3
Hma1.2p1_0150F.1_g066800 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 2.1e-17 92.8 73 64.4
Lsat_1_v5_gn_6_23540 Lactuca sativa HOM05D004197 ORTHO05D004975 3.0e-16 89.0 68 64.7
vmacro16589 Vaccinium macrocarpon HOM05D004197 ORTHO05D004975 3.0e-16 89.0 73 61.6
Gorai.004G076200 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.5e-15 86.7 131 39.7
arahy.Tifrunner.gnm1.ann1.HJ8Q1I Arachis hypogaea HOM05D004197 ORTHO05D004975 2.8e-14 82.4 68 61.8
Gohir.D04G172540 Gossypium hirsutum HOM05D004197 ORTHO05D004975 5.3e-13 78.2 61 60.7
Gorai.012G161800 Gossypium raimondii HOM05D004197 ORTHO05D004975 2.6e-12 75.9 61 59.0
Lsat_1_v5_gn_2_131080 Lactuca sativa HOM05D004197 ORTHO05D004975 4.5e-12 75.1 82 52.4
Gorai.004G234500 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.4e-10 70.1 56 60.7
Cre06.g270650 Chlamydomonas reinhardtii HOM05D004197 ORTHO05D004975 1.9e-10 69.7 119 29.4
Actinidia27110 Actinidia chinensis HOM05D004197 ORTHO05D004975 3.5e-09 65.5 38 81.6
arahy.Tifrunner.gnm1.ann1.HIJ85I Arachis hypogaea HOM05D004197 ORTHO05D087148 1.6e-06 56.6 31 87.1


User provided reference genes

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