Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.XV3FN1 Arachis hypogaea HOM05D009346 ORTHO05D000090 3.5e-28 130.6 168 100.0
arahy.Tifrunner.gnm1.ann1.8MI9U1 Arachis hypogaea HOM05D009346 ORTHO05D000090 1.5e-10 72.0 168 85.7
Lalb_Chr13g0294781 Lupinus albus HOM05D000162 ORTHO05D000090 2.8e-09 67.8 47 68.1
arahy.Tifrunner.gnm1.ann1.78B0B6 Arachis hypogaea HOM05D000162 ORTHO05D000090 2.0e-07 61.6 46 63.0
arahy.Tifrunner.gnm1.ann1.K4KTGW Arachis hypogaea HOM05D000162 ORTHO05D000090 5.8e-07 60.1 46 63.0
Glyma.08G108400 Glycine max HOM05D000162 ORTHO05D000090 9.9e-07 59.3 47 59.6
Glyma.05G151600 Glycine max HOM05D000162 ORTHO05D000090 1.7e-06 58.5 47 59.6
Medtr3g054110 Medicago truncatula HOM05D000162 ORTHO05D000090 2.2e-06 58.2 45 57.8
arahy.Tifrunner.gnm1.ann1.K7FXBU Arachis hypogaea HOM05D009346 ORTHO05D012019 2.9e-06 57.8 168 64.3
Glyma.07G173300 Glycine max HOM05D000162 ORTHO05D000090 3.7e-06 57.4 37 62.2
arahy.Tifrunner.gnm1.ann1.W9XRJL Arachis hypogaea HOM05D009346 ORTHO05D003288 6.4e-06 56.6 36 75.0
Ca_17997_v3 Cicer arietinum L. HOM05D000162 ORTHO05D000090 6.4e-06 56.6 47 59.6
Phvul.002G198150 Phaseolus vulgaris HOM05D000162 ORTHO05D000090 6.4e-06 56.6 47 57.4
Phvul.002G204300 Phaseolus vulgaris HOM05D000162 ORTHO05D000090 6.4e-06 56.6 47 57.4
QL93p0133_0031 Quercus lobata HOM05D000162 ORTHO05D000090 6.4e-06 56.6 46 52.2


User provided reference genes

Program Settings