Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.XUIM66 Arachis hypogaea HOM05D007952 ORTHO05D009823 9.5e-112 406.8 191 100.0
arahy.Tifrunner.gnm1.ann1.GIFH8E Arachis hypogaea HOM05D007952 ORTHO05D009823 4.3e-64 248.4 145 82.8
arahy.Tifrunner.gnm1.ann1.TT5YJH Arachis hypogaea HOM05D007952 ORTHO05D009823 2.6e-61 239.2 145 82.1
PGSC0003DMG400028997 Solanum tuberosum HOM05D007952 ORTHO05D009823 3.7e-55 218.8 143 78.3
Nn029s41587 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.3e-41 173.7 104 83.7
Nn064s42224 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.3e-41 173.7 104 83.7
Nn206s45068 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.3e-41 173.7 104 83.7
Nn219s45283 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.3e-41 173.7 104 83.7
Atru.chr13.2454 Acer truncatum HOM05D007952 ORTHO05D009823 3.0e-41 172.6 100 83.0
arahy.Tifrunner.gnm1.ann1.0845WK Arachis hypogaea HOM05D007952 ORTHO05D009823 3.0e-41 172.6 100 83.0
arahy.Tifrunner.gnm1.ann1.88RRM9 Arachis hypogaea HOM05D007952 ORTHO05D009823 3.0e-41 172.6 100 83.0
arahy.Tifrunner.gnm1.ann1.HDQ4NC Arachis hypogaea HOM05D007952 ORTHO05D009823 9.7e-40 167.5 100 81.0
arahy.Tifrunner.gnm1.ann1.RE2PS1 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.6e-39 166.8 116 74.1
SEGI_20804 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 1.1e-38 164.1 147 61.2
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 1.2e-37 160.6 96 81.2
SEGI_08440 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 2.9e-36 156.0 137 60.6
SEGI_09919 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 2.9e-36 156.0 137 60.6
SEGI_21867 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 2.9e-36 156.0 137 60.6
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 8.5e-36 154.5 113 69.0
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 8.5e-36 154.5 100 77.0
Lsat_1_v5_gn_4_99801 Lactuca sativa HOM05D007952 ORTHO05D009823 8.5e-36 154.5 100 77.0
PGSC0003DMG400035391 Solanum tuberosum HOM05D007952 ORTHO05D009823 8.5e-36 154.5 100 77.0
CSS0039937 Camellia sinensis var. sinensis HOM05D007952 ORTHO05D009823 1.6e-34 150.2 100 77.0
Medtr3g035635 Medicago truncatula HOM05D007952 ORTHO05D009823 2.1e-34 149.8 100 76.0
Oeu020621.1 Olea europaea HOM05D007952 ORTHO05D009823 6.1e-34 148.3 100 73.0
Nn5g29057 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.8e-33 146.7 100 75.0
Sc01g0006530 Simmondsia chinensis HOM05D007952 ORTHO05D009823 3.0e-33 146.0 100 74.0
Medtr0002s0270 Medicago truncatula HOM05D007952 ORTHO05D009823 3.9e-33 145.6 100 73.0
ECA246G1432 Erigeron canadensis HOM05D007952 ORTHO05D009823 4.4e-32 142.1 107 70.1
arahy.Tifrunner.gnm1.ann1.J5KLX8 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.3e-31 140.6 100 67.0
BolSC44t60812H Brassica oleracea HOM05D007952 ORTHO05D009823 5.3e-30 135.2 91 74.7
Sc04g0003580 Simmondsia chinensis HOM05D007952 ORTHO05D009823 4.5e-29 132.1 100 69.0
Sc21g0004590 Simmondsia chinensis HOM05D007952 ORTHO05D009823 4.5e-29 132.1 128 53.9
arahy.Tifrunner.gnm1.ann1.PHD7EH Arachis hypogaea HOM05D007952 ORTHO05D009823 2.2e-28 129.8 100 66.0
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 2.2e-28 129.8 91 72.5
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 8.5e-28 127.9 113 62.8
EL10Ac6g15366 Beta vulgaris HOM05D007952 ORTHO05D009823 1.4e-27 127.1 94 70.2
SEGI_35056 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 2.5e-27 126.3 118 56.8
Oeu022560.1 Olea europaea HOM05D007952 ORTHO05D009823 1.0e-25 120.9 140 49.3
Sed0014465 Sechium edule HOM05D010190 ORTHO05D004271 2.3e-25 119.8 111 62.2
Peaxi162Scf00987g00215 Petunia axillaris HOM05D007952 ORTHO05D009823 3.3e-24 115.9 61 86.9
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 9.7e-24 114.4 52 98.1
MBI08_g48227_MAGBIO Magnolia biondii HOM05D007952 ORTHO05D009823 9.7e-24 114.4 52 98.1
unitig_87.g27919 Utricularia gibba HOM05D007952 ORTHO05D009823 9.7e-24 114.4 52 98.1
unitig_87.g28035 Utricularia gibba HOM05D007952 ORTHO05D009823 9.7e-24 114.4 52 98.1
unitig_91.g26519 Utricularia gibba HOM05D007952 ORTHO05D009823 9.7e-24 114.4 52 98.1
Migut.D01400 Erythranthe guttata HOM05D007952 ORTHO05D009823 1.3e-23 114.0 51 100.0
Lj2C1239G84 Lonicera japonica HOM05D007952 ORTHO05D009823 8.2e-23 111.3 53 96.2
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 1.1e-22 110.9 74 74.3
Hma1.2p1_0594F.1_g185798 Hydrangea macrophylla HOM05D007952 ORTHO05D009823 1.8e-22 110.2 51 98.0
EL10As10g23962 Beta vulgaris HOM05D007952 ORTHO05D009823 2.4e-22 109.8 52 96.2
Atru.chr9.365 Acer truncatum HOM05D007952 ORTHO05D009823 1.2e-21 107.5 51 94.1
ECA232G1868 Erigeron canadensis HOM05D000002 ORTHO05D002065 5.9e-21 105.1 102 55.9
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 2.9e-20 102.8 99 57.6
Psat0ss8367g0160 Pisum sativum HOM05D001387 ORTHO05D001250 3.8e-20 102.4 95 56.8
Sc23g0003910 Simmondsia chinensis HOM05D007952 ORTHO05D009823 1.9e-19 100.1 70 70.0
Sopen11g014330 Solanum pennellii HOM05D000743 ORTHO05D000580 3.2e-19 99.4 85 62.4
Ca_02733_v3 Cicer arietinum L. HOM05D008016 ORTHO05D009823 5.5e-19 98.6 103 53.4
CAN.G262.4 Capsicum annuum HOM05D007952 ORTHO05D009823 2.7e-18 96.3 104 53.8
DCAR_004958 Daucus carota HOM05D007952 ORTHO05D009823 3.6e-18 95.9 74 67.6
SEGI_38349 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 5.2e-17 92.0 51 84.3
BcaC04g20704 Brassica carinata HOM05D007952 ORTHO05D009823 5.7e-16 88.6 48 83.3
Nn6g32821 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.3e-15 87.4 39 97.4
Nn6g32826 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.3e-15 87.4 39 97.4
Peaxi162Scf00608g00016 Petunia axillaris HOM05D000680 ORTHO05D005619 1.4e-14 84.0 45 88.9
Potri.005G037850 Populus trichocarpa HOM05D007952 ORTHO05D009823 1.4e-14 84.0 52 76.9
Nitab4.5_0004552g0010 Nicotiana tabacum HOM05D000796 ORTHO05D009823 3.1e-14 82.8 87 52.9
CAN.G1186.47 Capsicum annuum HOM05D007952 ORTHO05D009823 4.1e-14 82.4 78 56.4
SabraPtG0006400 Salix brachista HOM05D012647 ORTHO05D014727 5.3e-14 82.0 59 69.5
arahy.Tifrunner.gnm1.ann1.840LER Arachis hypogaea HOM05D000533 ORTHO05D002807 7.0e-14 81.6 40 97.5
SEGI_02200 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 9.1e-14 81.3 56 69.6
SEGI_20161 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 2.7e-13 79.7 113 44.2
Lsat_1_v5_gn_2_20561 Lactuca sativa HOM05D010488 ORTHO05D011667 4.5e-13 79.0 40 95.0
TAR626G1139 Trochodendron aralioides HOM05D000301 ORTHO05D000303 7.7e-13 78.2 40 92.5
Nn6g33130 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.7e-12 77.0 34 97.1
CAN.G2251.1 Capsicum annuum HOM05D010190 ORTHO05D011667 2.2e-12 76.6 54 70.4
Oeu000007.1 Olea europaea HOM05D007952 ORTHO05D009823 2.9e-12 76.3 81 49.4
Peaxi162Scf00002g00723 Petunia axillaris HOM05D007952 ORTHO05D009823 2.9e-12 76.3 76 52.6
Nitab4.5_0001170g0050 Nicotiana tabacum HOM05D010190 ORTHO05D011667 8.5e-12 74.7 82 52.4
arahy.Tifrunner.gnm1.ann1.9E5EUV Arachis hypogaea HOM05D000388 ORTHO05D000473 1.1e-11 74.3 65 63.1
Nitab4.5_0007025g0020 Nicotiana tabacum HOM05D001226 ORTHO05D009823 1.1e-11 74.3 74 54.1
Nitab4.5_0003382g0050 Nicotiana tabacum HOM05D010190 ORTHO05D011667 2.5e-11 73.2 40 90.0
arahy.Tifrunner.gnm1.ann1.GRFW67 Arachis hypogaea HOM05D008490 ORTHO05D010725 3.2e-11 72.8 93 49.5
Nitab4.5_0007400g0010 Nicotiana tabacum HOM05D007952 ORTHO05D009823 5.5e-11 72.0 54 63.0
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 9.4e-11 71.2 84 48.8
Oeu012768.1 Olea europaea HOM05D007952 ORTHO05D009823 2.1e-10 70.1 121 45.5
CBR_g12953 Chara braunii HOM05D000019 ORTHO05D000048 3.6e-10 69.3 42 76.2
arahy.Tifrunner.gnm1.ann1.B37VQ6 Arachis hypogaea HOM05D007952 ORTHO05D009823 5.2e-09 65.5 30 93.3
BolC6t36075H Brassica oleracea HOM05D000963 ORTHO05D009823 4.4e-08 62.4 31 83.9
TPR.G384 Trifolium pratense HOM05D010190 ORTHO05D010933 1.3e-07 60.8 35 80.0
Lj5g0002635 Lotus japonicus HOM05D008490 ORTHO05D010725 3.7e-07 59.3 78 48.7
Nn031s41604 Nelumbo nucifera HOM05D007952 ORTHO05D009823 4.8e-07 58.9 28 96.4
Nn233s45560 Nelumbo nucifera HOM05D007952 ORTHO05D009823 4.8e-07 58.9 28 96.4
Nn241s45689 Nelumbo nucifera HOM05D007952 ORTHO05D009823 4.8e-07 58.9 28 96.4
Nn6g33131 Nelumbo nucifera HOM05D007952 ORTHO05D009823 4.8e-07 58.9 28 96.4
Nn6g33484 Nelumbo nucifera HOM05D007952 ORTHO05D009823 4.8e-07 58.9 28 96.4
Oeu011728.3 Olea europaea HOM05D002681 ORTHO05D003372 4.8e-07 58.9 28 96.4
CAN.G8.21 Capsicum annuum HOM05D000580 ORTHO05D001362 1.1e-06 57.8 39 66.7
arahy.Tifrunner.gnm1.ann1.P1C4N2 Arachis hypogaea HOM05D010190 ORTHO05D011667 1.4e-06 57.4 35 77.1
CSS0048923 Camellia sinensis var. sinensis HOM05D008490 ORTHO05D010725 1.4e-06 57.4 86 45.3
DCAR_017252 Daucus carota HOM05D010488 ORTHO05D011667 1.4e-06 57.4 31 90.3
arahy.Tifrunner.gnm1.ann1.BZJ16Q Arachis hypogaea HOM05D008490 ORTHO05D010725 1.8e-06 57.0 85 45.9
arahy.Tifrunner.gnm1.ann1.PAX1AS Arachis hypogaea HOM05D008490 ORTHO05D010725 1.8e-06 57.0 85 45.9
ECA039G0024 Erigeron canadensis HOM05D008490 ORTHO05D010725 1.8e-06 57.0 85 45.9
Lsat_1_v5_gn_5_16680 Lactuca sativa HOM05D008490 ORTHO05D010725 1.8e-06 57.0 79 46.8
Lj5g0013341 Lotus japonicus HOM05D008490 ORTHO05D010725 1.8e-06 57.0 85 45.9
LjContig00439g0024223 Lotus japonicus HOM05D008490 ORTHO05D010725 1.8e-06 57.0 85 45.9
MBI05_g05344_MAGBIO Magnolia biondii HOM05D008490 ORTHO05D010725 1.8e-06 57.0 85 45.9
Sed0016837 Sechium edule HOM05D008490 ORTHO05D010725 1.8e-06 57.0 85 45.9
Sed0023681 Sechium edule HOM05D008490 ORTHO05D010725 1.8e-06 57.0 86 45.3
VMungo0329G0002 Vigna mungo HOM05D008490 ORTHO05D010725 1.8e-06 57.0 85 45.9
Atru.chr9.2550 Acer truncatum HOM05D010190 ORTHO05D009823 3.1e-06 56.2 28 89.3
arahy.Tifrunner.gnm1.ann1.4P2RM7 Arachis hypogaea HOM05D005034 ORTHO05D006234 4.1e-06 55.8 28 92.9
Phvul.009G038333 Phaseolus vulgaris HOM05D007952 ORTHO05D009823 4.1e-06 55.8 28 92.9
Actinidia30703 Actinidia chinensis HOM05D001966 ORTHO05D009823 5.4e-06 55.5 121 35.5
Psat4g185480 Pisum sativum HOM05D008490 ORTHO05D010725 5.4e-06 55.5 85 44.7
TPR.G7850 Trifolium pratense HOM05D008490 ORTHO05D010725 5.4e-06 55.5 157 34.4
Nn1g08228 Nelumbo nucifera HOM05D007952 ORTHO05D009823 7.0e-06 55.1 28 89.3
Peaxi162Scf00477g00823 Petunia axillaris HOM05D008490 ORTHO05D010725 9.1e-06 54.7 87 43.7


User provided reference genes

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