Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.XTK2NM Arachis hypogaea HOM05D004817 ORTHO05D005790 7.5e-31 136.7 78 100.0
arahy.Tifrunner.gnm1.ann1.E7NGHZ Arachis hypogaea HOM05D004817 ORTHO05D005790 2.8e-30 134.8 78 97.4
Phvul.009G221600 Phaseolus vulgaris HOM05D004817 ORTHO05D005790 6.1e-25 117.1 78 79.5
Glyma.09G077700 Glycine max HOM05D004817 ORTHO05D005790 1.8e-24 115.5 78 78.2
Glyma.13G117300 Glycine max HOM05D004817 ORTHO05D005790 1.8e-24 115.5 77 80.5
Psat1g016600 Pisum sativum HOM05D004817 ORTHO05D005790 6.8e-24 113.6 78 78.2
Glyma.15G185200 Glycine max HOM05D004817 ORTHO05D005790 2.0e-23 112.1 79 78.5
TPR.G29237 Trifolium pratense HOM05D004817 ORTHO05D005790 4.4e-23 110.9 78 76.9
Manes.03G213500 Manihot esculenta HOM05D004817 ORTHO05D005790 7.5e-23 110.2 78 75.6
QL06p014718 Quercus lobata HOM05D004817 ORTHO05D005790 1.3e-22 109.4 76 76.3
Phvul.003G124400 Phaseolus vulgaris HOM05D004817 ORTHO05D005790 1.7e-22 109.0 77 76.6
Ca_02320_v3 Cicer arietinum L. HOM05D004817 ORTHO05D005790 2.2e-22 108.6 78 73.1
Atru.chr4.3187 Acer truncatum HOM05D004817 ORTHO05D005790 2.8e-22 108.2 81 70.4
Lalb_Chr23g0276121 Lupinus albus HOM05D004817 ORTHO05D005790 2.8e-22 108.2 77 76.6
Glyma.17G042600 Glycine max HOM05D004817 ORTHO05D005790 4.9e-22 107.5 77 76.6
Lalb_Chr07g0181551 Lupinus albus HOM05D004817 ORTHO05D005790 4.9e-22 107.5 78 73.1
Medtr2g044940 Medicago truncatula HOM05D004817 ORTHO05D005790 2.4e-21 105.1 78 73.1
CiPaw.01G127200 Carya illinoinensis HOM05D004817 ORTHO05D005790 3.1e-21 104.8 76 73.7
Lalb_Chr12g0200501 Lupinus albus HOM05D004817 ORTHO05D005790 3.1e-21 104.8 78 71.8
COL.COLO4_25048 Corchorus olitorius HOM05D004817 ORTHO05D005790 4.1e-21 104.4 76 72.4
Potri.010G004000 Populus trichocarpa HOM05D004817 ORTHO05D005790 7.0e-21 103.6 78 70.5
Gohir.D01G023700 Gossypium hirsutum HOM05D004817 ORTHO05D005790 1.6e-20 102.4 74 73.0
Gorai.002G032200 Gossypium raimondii HOM05D004817 ORTHO05D005790 1.6e-20 102.4 74 73.0
Lalb_Chr08g0232961 Lupinus albus HOM05D004817 ORTHO05D005790 1.6e-20 102.4 77 72.7
Lj6g0012255 Lotus japonicus HOM05D004817 ORTHO05D005790 2.0e-20 102.1 78 69.2
Medtr4g124250 Medicago truncatula HOM05D004817 ORTHO05D005790 2.0e-20 102.1 79 70.9
Dinv24730 Davidia involucrata HOM05D004817 ORTHO05D005790 2.7e-20 101.7 78 70.5
Gohir.A01G036400 Gossypium hirsutum HOM05D004817 ORTHO05D005790 2.7e-20 101.7 74 73.0
Lj2g0017510 Lotus japonicus HOM05D004817 ORTHO05D005790 2.7e-20 101.7 76 71.1
Cfa015752 Carpinus fangiana HOM05D004817 ORTHO05D005790 4.5e-20 100.9 76 67.1
TPR.G12580 Trifolium pratense HOM05D004817 ORTHO05D005790 4.5e-20 100.9 79 69.6
Lalb_Chr11g0073761 Lupinus albus HOM05D004817 ORTHO05D005790 1.0e-19 99.8 75 70.7
Eucgr.B02200 Eucalyptus grandis HOM05D004817 ORTHO05D005790 1.7e-19 99.0 76 71.1
Ciclev10007149m.g Citrus clementina HOM05D004817 ORTHO05D005790 2.3e-19 98.6 77 67.5
Duzib151G1168 Durio zibethinus HOM05D004817 ORTHO05D005790 2.3e-19 98.6 74 70.3
Sabra10G0003400 Salix brachista HOM05D004817 ORTHO05D005790 2.3e-19 98.6 78 67.9
MD13G1137200 Malus domestica HOM05D004817 ORTHO05D005790 2.9e-19 98.2 76 67.1
Prupe.1G208000 Prunus persica HOM05D004817 ORTHO05D005790 5.0e-19 97.4 78 65.4
Lj4g0003186 Lotus japonicus HOM05D004817 ORTHO05D005790 8.6e-19 96.7 76 68.4
arahy.Tifrunner.gnm1.ann1.WNQ9XL Arachis hypogaea HOM05D004817 ORTHO05D005790 1.1e-18 96.3 85 75.3
MD16G1133100 Malus domestica HOM05D004817 ORTHO05D005790 1.1e-18 96.3 76 64.5
Nn4g25286 Nelumbo nucifera HOM05D004817 ORTHO05D005790 1.1e-18 96.3 75 66.7
PGR031G2777 Punica granatum HOM05D004817 ORTHO05D005790 1.5e-18 95.9 77 67.5
Lalb_Chr13g0299061 Lupinus albus HOM05D004817 ORTHO05D005790 4.2e-18 94.4 71 70.4
RcHm_v2.0_Chr4g0427991 Rosa chinensis HOM05D004817 ORTHO05D005790 4.2e-18 94.4 76 64.5
arahy.Tifrunner.gnm1.ann1.V5CRDX Arachis hypogaea HOM05D004817 ORTHO05D005790 1.2e-17 92.8 87 72.4
THA.LOC104821815 Tarenaya hassleriana HOM05D004817 ORTHO05D005790 1.6e-17 92.4 79 62.0
FAN12G2725 Fragaria x ananassa HOM05D004817 ORTHO05D005790 2.1e-17 92.0 76 64.5
PGR004G2302 Punica granatum HOM05D004817 ORTHO05D005790 2.1e-17 92.0 81 64.2
SalBow6G6449 Salvia bowleyana HOM05D004817 ORTHO05D005790 2.1e-17 92.0 76 59.2
Solyc05g053180.3 Solanum lycopersicum HOM05D004817 ORTHO05D005790 2.1e-17 92.0 71 64.8
Sopen05g031690 Solanum pennellii HOM05D004817 ORTHO05D005790 2.1e-17 92.0 71 64.8
CARHR092890 Cardamine hirsuta HOM05D004817 ORTHO05D005790 2.8e-17 91.7 76 60.5
AT1G48330 Arabidopsis thaliana HOM05D004817 ORTHO05D005790 3.6e-17 91.3 76 60.5
CAN.G305.33 Capsicum annuum HOM05D004817 ORTHO05D005790 3.6e-17 91.3 71 64.8
Nitab4.5_0000745g0110 Nicotiana tabacum HOM05D004817 ORTHO05D005790 3.6e-17 91.3 69 66.7
PGSC0003DMG400027147 Solanum tuberosum HOM05D004817 ORTHO05D005790 3.6e-17 91.3 71 64.8
Psat4g020640 Pisum sativum HOM05D004817 ORTHO05D005790 4.7e-17 90.9 69 71.0
GSVIVG01017708001 Vitis vinifera HOM05D004817 ORTHO05D005790 4.7e-17 90.9 76 65.8
CANSAT25G3847 Cannabis sativa HOM05D004817 ORTHO05D005790 6.1e-17 90.5 83 59.0
Aqoxy5G02845 Aquilegia oxysepala HOM05D004817 ORTHO05D005790 8.0e-17 90.1 73 61.6
BcaB06g25835 Brassica carinata HOM05D004817 ORTHO05D005790 8.0e-17 90.1 81 60.5
Eucgr.H04140 Eucalyptus grandis HOM05D004817 ORTHO05D005790 8.0e-17 90.1 74 64.9
FvH4_4g21760 Fragaria vesca HOM05D004817 ORTHO05D005790 8.0e-17 90.1 76 63.2
FAN07G2633 Fragaria x ananassa HOM05D004817 ORTHO05D005790 8.0e-17 90.1 76 63.2
FAN17G1578 Fragaria x ananassa HOM05D004817 ORTHO05D005790 8.0e-17 90.1 76 63.2
CARHR037950 Cardamine hirsuta HOM05D004817 ORTHO05D005790 1.0e-16 89.7 78 61.5
Sed0022538 Sechium edule HOM05D004817 ORTHO05D005790 1.0e-16 89.7 83 60.2
Thecc.04G314800 Theobroma cacao HOM05D004817 ORTHO05D005790 1.0e-16 89.7 78 64.1
A05p32270 Brassica napus HOM05D004817 ORTHO05D005790 1.4e-16 89.4 84 58.3
BraA05t22056Z Brassica rapa HOM05D004817 ORTHO05D005790 1.4e-16 89.4 84 58.3
Cpa.g.sc146.7 Carica papaya HOM05D004817 ORTHO05D005790 1.8e-16 89.0 84 58.3
Nitab4.5_0001769g0110 Nicotiana tabacum HOM05D004817 ORTHO05D005790 1.8e-16 89.0 70 65.7
AL1G54940 Arabidopsis lyrata HOM05D004817 ORTHO05D005790 2.3e-16 88.6 78 60.3
Migut.J01631 Erythranthe guttata HOM05D004817 ORTHO05D005790 2.3e-16 88.6 74 63.5
C05p48800 Brassica napus HOM05D004817 ORTHO05D005790 4.0e-16 87.8 84 57.1
BolC5t33617H Brassica oleracea HOM05D004817 ORTHO05D005790 4.0e-16 87.8 84 57.1
BcaC05g28773 Brassica carinata HOM05D004817 ORTHO05D005790 5.2e-16 87.4 84 57.1
Thhalv10011909m.g Eutrema salsugineum HOM05D004817 ORTHO05D005790 5.2e-16 87.4 78 60.3
Carub.0001s3746 Capsella rubella HOM05D004817 ORTHO05D005790 6.8e-16 87.0 81 58.0
Thhalv10022414m.g Eutrema salsugineum HOM05D004817 ORTHO05D005790 6.8e-16 87.0 82 57.3
BcaB07g33764 Brassica carinata HOM05D004817 ORTHO05D005790 8.9e-16 86.7 78 59.0
BcaC07g37143 Brassica carinata HOM05D004817 ORTHO05D005790 8.9e-16 86.7 78 59.0
A08p04790 Brassica napus HOM05D004817 ORTHO05D005790 8.9e-16 86.7 78 59.0
C08p05160 Brassica napus HOM05D004817 ORTHO05D005790 8.9e-16 86.7 72 61.1
BraA08t32509Z Brassica rapa HOM05D004817 ORTHO05D005790 8.9e-16 86.7 78 59.0
Sp1g35290 Schrenkiella parvula HOM05D004817 ORTHO05D005790 8.9e-16 86.7 78 59.0
Sp3g15710 Schrenkiella parvula HOM05D004817 ORTHO05D005790 8.9e-16 86.7 82 57.3
AT3G17580 Arabidopsis thaliana HOM05D004817 ORTHO05D005790 1.2e-15 86.3 81 56.8
BcaB04g17438 Brassica carinata HOM05D004817 ORTHO05D005790 1.2e-15 86.3 78 59.0
Carub.0003s1729 Capsella rubella HOM05D004817 ORTHO05D005790 1.2e-15 86.3 79 58.2
AL3G30650 Arabidopsis lyrata HOM05D004817 ORTHO05D005790 1.5e-15 85.9 75 58.7
BcaC08g43030 Brassica carinata HOM05D004817 ORTHO05D005790 1.5e-15 85.9 72 59.7
A05p21090 Brassica napus HOM05D004817 ORTHO05D005790 1.5e-15 85.9 78 59.0
C06p02830 Brassica napus HOM05D004817 ORTHO05D005790 1.5e-15 85.9 72 59.7
BolC5t32277H Brassica oleracea HOM05D004817 ORTHO05D005790 1.5e-15 85.9 78 59.0
BolC6t35412H Brassica oleracea HOM05D004817 ORTHO05D005790 1.5e-15 85.9 72 59.7
BraA05t21012Z Brassica rapa HOM05D004817 ORTHO05D005790 1.5e-15 85.9 78 59.0
TAR362G1300 Trochodendron aralioides HOM05D004817 ORTHO05D005790 1.5e-15 85.9 77 57.1
BcaC05g27577 Brassica carinata HOM05D004817 ORTHO05D005790 2.0e-15 85.5 72 61.1
C05p35610 Brassica napus HOM05D004817 ORTHO05D005790 2.0e-15 85.5 72 61.1
PSO761G0543 Papaver somniferum HOM05D004817 ORTHO05D005790 2.0e-15 85.5 74 59.5
EL10Ac3g06222 Beta vulgaris HOM05D004817 ORTHO05D005790 2.6e-15 85.1 75 61.3
ClCG05G006950 Citrullus lanatus HOM05D004817 ORTHO05D005790 2.6e-15 85.1 83 57.8
BcaB04g18952 Brassica carinata HOM05D004817 ORTHO05D005790 3.4e-15 84.7 82 56.1
BcaC01g03751 Brassica carinata HOM05D004817 ORTHO05D005790 3.4e-15 84.7 82 56.1
C03p48950 Brassica napus HOM05D004817 ORTHO05D005790 3.4e-15 84.7 82 56.1
BolC3t17174H Brassica oleracea HOM05D004817 ORTHO05D005790 3.4e-15 84.7 82 56.1
BraA03t13178Z Brassica rapa HOM05D004817 ORTHO05D005790 3.4e-15 84.7 82 56.1
Aa31LG8G4450 Aethionema arabicum HOM05D004817 ORTHO05D005790 4.4e-15 84.3 85 54.1
BraA06t23656Z Brassica rapa HOM05D004817 ORTHO05D005790 4.4e-15 84.3 78 57.7
Aqoxy2G02458 Aquilegia oxysepala HOM05D004817 ORTHO05D005790 7.5e-15 83.6 76 57.9
BcaC09g48714 Brassica carinata HOM05D004817 ORTHO05D005790 7.5e-15 83.6 82 56.1
MBI18_g40079_MAGBIO Magnolia biondii HOM05D004817 ORTHO05D005790 7.5e-15 83.6 78 56.4
Sed0023994 Sechium edule HOM05D004817 ORTHO05D005790 7.5e-15 83.6 70 64.3
A03p40250 Brassica napus HOM05D004817 ORTHO05D005790 9.8e-15 83.2 82 54.9
MBI18_g46513_MAGBIO Magnolia biondii HOM05D004817 ORTHO05D005790 9.8e-15 83.2 76 56.6
Hund12264 Selenicereus undatus HOM05D004817 ORTHO05D005790 9.8e-15 83.2 75 60.0
Aa31LG10G5430 Aethionema arabicum HOM05D004817 ORTHO05D005790 1.3e-14 82.8 81 55.6
unitig_746.g26894 Utricularia gibba HOM05D004817 ORTHO05D005790 1.3e-14 82.8 72 61.1
A01p36770 Brassica napus HOM05D004817 ORTHO05D005790 1.7e-14 82.4 83 55.4
BraA01t03738Z Brassica rapa HOM05D004817 ORTHO05D005790 1.7e-14 82.4 83 55.4
BcaB04g20835 Brassica carinata HOM05D004817 ORTHO05D005790 2.2e-14 82.0 83 55.4
Cc03_g00010 Coffea canephora HOM05D004817 ORTHO05D005790 4.9e-14 80.9 71 59.2
CsaV3_3G015620 Cucumis sativus L. HOM05D004817 ORTHO05D005790 4.9e-14 80.9 84 54.8
CANSAT78G0586 Cannabis sativa HOM05D004817 ORTHO05D005790 6.3e-14 80.5 82 69.5
Oeu022716.1 Olea europaea HOM05D004817 ORTHO05D005790 1.4e-13 79.3 68 60.3
DCAR_023420 Daucus carota HOM05D004817 ORTHO05D005790 2.4e-13 78.6 78 55.1
Oeu002212.1 Olea europaea HOM05D004817 ORTHO05D005790 5.4e-13 77.4 70 60.0
unitig_21.g20684 Utricularia gibba HOM05D004817 ORTHO05D005790 1.6e-12 75.9 74 50.0
DCAR_026926 Daucus carota HOM05D004817 ORTHO05D005790 2.0e-12 75.5 78 51.3
Peaxi162Scf00323g00924 Petunia axillaris HOM05D004817 ORTHO05D005790 3.5e-12 74.7 69 56.5
Haze_00750 Corylus avellana HOM05D004817 ORTHO05D005790 1.7e-11 72.4 58 67.2
unitig_744.g24175 Utricularia gibba HOM05D004817 ORTHO05D005790 3.9e-11 71.2 74 48.6
PGSC0003DMG400004597 Solanum tuberosum HOM05D004817 ORTHO05D005790 5.0e-11 70.9 69 53.6
Solyc12g098880.2 Solanum lycopersicum HOM05D004817 ORTHO05D005790 6.6e-11 70.5 69 52.2
Sopen12g033630 Solanum pennellii HOM05D004817 ORTHO05D005790 1.1e-10 69.7 69 52.2
DCAR_030417 Daucus carota HOM05D004817 ORTHO05D005790 1.5e-10 69.3 93 43.0
CDE02G4689 Ceratophyllum demersum HOM05D004817 ORTHO05D005790 1.9e-10 68.9 71 52.1
Eucgr.H01515 Eucalyptus grandis HOM05D004817 ORTHO05D005790 2.5e-10 68.6 78 48.7
DCAR_002559 Daucus carota HOM05D004817 ORTHO05D005790 9.5e-10 66.6 88 40.9
Nitab4.5_0000978g0020 Nicotiana tabacum HOM05D004817 ORTHO05D005790 1.6e-09 65.9 69 55.1
CDE08G0719 Ceratophyllum demersum HOM05D004817 ORTHO05D005790 2.8e-09 65.1 70 50.0
Zm00001eb129600 Zea mays HOM05D004817 ORTHO05D005790 3.6e-09 64.7 78 46.2
Nitab4.5_0003998g0090 Nicotiana tabacum HOM05D004817 ORTHO05D005790 2.3e-08 62.0 68 52.9
TAR365G0774 Trochodendron aralioides HOM05D004817 ORTHO05D005790 2.3e-08 62.0 33 78.8
ATR0796G174 Amborella trichopoda HOM05D004817 ORTHO05D005790 3.1e-08 61.6 64 54.7
Zm00001eb332330 Zea mays HOM05D004817 ORTHO05D005790 4.0e-08 61.2 86 40.7
Os01g0288200 Oryza sativa ssp. japonica HOM05D004817 ORTHO05D005790 3.7e-06 54.7 78 42.3


User provided reference genes

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