Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.XJ54RQ Arachis hypogaea HOM05D000391 ORTHO05D000293 5.5e-50 200.7 101 100.0
MD02G1291300 Malus domestica HOM05D000391 ORTHO05D000293 6.3e-14 80.9 93 44.1
Actinidia06261 Actinidia chinensis HOM05D000391 ORTHO05D000293 1.1e-13 80.1 97 44.3
MD07G1035300 Malus domestica HOM05D000391 ORTHO05D000293 5.3e-13 77.8 90 43.3
Solyc01g081530.3 Solanum lycopersicum HOM05D000391 ORTHO05D000293 5.3e-13 77.8 97 46.4
Sopen01g033090 Solanum pennellii HOM05D000391 ORTHO05D000293 5.3e-13 77.8 97 46.4
Cc00_g06290 Coffea canephora HOM05D000391 ORTHO05D000293 7.0e-13 77.4 111 40.5
vmacro13740 Vaccinium macrocarpon HOM05D000391 ORTHO05D000293 9.1e-13 77.0 97 45.4
GSVIVG01000828001 Vitis vinifera HOM05D000391 ORTHO05D000293 1.2e-12 76.6 90 41.1
Cc00_g06330 Coffea canephora HOM05D000391 ORTHO05D000293 2.6e-12 75.5 97 42.3
PGSC0003DMG400040554 Solanum tuberosum HOM05D000391 ORTHO05D000293 2.6e-12 75.5 97 45.4
Duzib114G0538 Durio zibethinus HOM05D000391 ORTHO05D000293 4.5e-12 74.7 86 47.7
Glyma.13G200100 Glycine max HOM05D000391 ORTHO05D000293 4.5e-12 74.7 97 42.3
Rhsim07G0065100 Rhododendron simsii HOM05D000391 ORTHO05D000293 5.9e-12 74.3 97 43.3
Cc00_g06280 Coffea canephora HOM05D000391 ORTHO05D000293 1.0e-11 73.6 97 41.2
Lj3g0021472 Lotus japonicus HOM05D000391 ORTHO05D000293 1.0e-11 73.6 97 42.3
Prupe.2G031700 Prunus persica HOM05D000391 ORTHO05D000293 1.7e-11 72.8 92 40.2
RcHm_v2.0_Chr1g0321331 Rosa chinensis HOM05D000391 ORTHO05D000293 1.7e-11 72.8 90 41.1
PGSC0003DMG402019427 Solanum tuberosum HOM05D000391 ORTHO05D000293 2.2e-11 72.4 90 42.2
Actinidia06259 Actinidia chinensis HOM05D000391 ORTHO05D000293 2.9e-11 72.0 96 43.8
ClCG05G026660 Citrullus lanatus HOM05D000391 ORTHO05D000293 2.9e-11 72.0 90 41.1
Glyma.15G238500 Glycine max HOM05D000391 ORTHO05D000293 2.9e-11 72.0 97 42.3
PGR031G3263 Punica granatum HOM05D000391 ORTHO05D000293 2.9e-11 72.0 97 42.3
Ciclev10031919m.g Citrus clementina HOM05D000391 ORTHO05D000293 3.8e-11 71.6 93 41.9
FvH4_7g02633 Fragaria vesca HOM05D000391 ORTHO05D000293 3.8e-11 71.6 97 40.2
FAN06G2822 Fragaria x ananassa HOM05D000391 ORTHO05D000293 3.8e-11 71.6 97 40.2
Potri.001G024800 Populus trichocarpa HOM05D000391 ORTHO05D000293 3.8e-11 71.6 97 42.3
Sabra01G0018500 Salix brachista HOM05D000391 ORTHO05D000293 3.8e-11 71.6 97 42.3
Sopen01g041170 Solanum pennellii HOM05D000391 ORTHO05D000293 3.8e-11 71.6 90 42.2
Thecc.10G170300 Theobroma cacao HOM05D000391 ORTHO05D000293 3.8e-11 71.6 86 46.5
Lj9A648T55 Lonicera japonica HOM05D000391 ORTHO05D000293 5.0e-11 71.2 92 42.4
Solyc01g097510.4 Solanum lycopersicum HOM05D000391 ORTHO05D000293 5.0e-11 71.2 90 42.2
FAN03G2569 Fragaria x ananassa HOM05D000391 ORTHO05D000293 6.5e-11 70.9 97 40.2
TPR.G9102 Trifolium pratense HOM05D000391 ORTHO05D000293 6.5e-11 70.9 97 43.3
TWI38G1330 Tripterygium wilfordii HOM05D000391 ORTHO05D000293 6.5e-11 70.9 96 41.7
Ca_00608_v3 Cicer arietinum L. HOM05D000391 ORTHO05D000293 8.5e-11 70.5 97 43.3
Lalb_Chr01g0007941 Lupinus albus HOM05D000391 ORTHO05D000293 8.5e-11 70.5 97 41.2
Manes.11G003700 Manihot esculenta HOM05D000391 ORTHO05D000293 8.5e-11 70.5 92 39.1
Nitab4.5_0005059g0030 Nicotiana tabacum HOM05D000391 ORTHO05D000293 1.1e-10 70.1 90 41.1
Phvul.011G209500 Phaseolus vulgaris HOM05D000391 ORTHO05D000293 1.1e-10 70.1 97 40.2
FAN10G0368 Fragaria x ananassa HOM05D000391 ORTHO05D000293 1.5e-10 69.7 96 40.6
QL04p014193 Quercus lobata HOM05D000391 ORTHO05D000293 1.5e-10 69.7 90 40.0
Cc00_g06270 Coffea canephora HOM05D000391 ORTHO05D000293 1.9e-10 69.3 97 41.2
Dinv32040 Davidia involucrata HOM05D000391 ORTHO05D000293 2.5e-10 68.9 86 40.7
Duzib128G1459 Durio zibethinus HOM05D000391 ORTHO05D000293 2.5e-10 68.9 90 44.4
Solyc01g097540.4 Solanum lycopersicum HOM05D000391 ORTHO05D000293 2.5e-10 68.9 90 43.3
Sopen01g041190 Solanum pennellii HOM05D000391 ORTHO05D000293 2.5e-10 68.9 90 43.3
Cc00_g34620 Coffea canephora HOM05D000391 ORTHO05D000293 3.2e-10 68.6 97 41.2
Eucgr.G03248 Eucalyptus grandis HOM05D000391 ORTHO05D000293 3.2e-10 68.6 96 39.6
Nitab4.5_0005059g0040 Nicotiana tabacum HOM05D000391 ORTHO05D000293 3.2e-10 68.6 92 40.2
PGSC0003DMG401019427 Solanum tuberosum HOM05D000391 ORTHO05D000293 3.2e-10 68.6 90 43.3
MSTRG.20528 Avicennia marina HOM05D000391 ORTHO05D000293 4.2e-10 68.2 92 44.6
MELO3C012455.2 Cucumis melo HOM05D000391 ORTHO05D000293 4.2e-10 68.2 90 38.9
FAN01G1602 Fragaria x ananassa HOM05D000391 ORTHO05D000293 5.5e-10 67.8 97 39.2
Nitab4.5_0005582g0070 Nicotiana tabacum HOM05D000391 ORTHO05D000293 5.5e-10 67.8 90 41.1
CAN.G134.116 Capsicum annuum HOM05D000391 ORTHO05D000293 7.2e-10 67.4 90 42.2
COL.COLO4_35436 Corchorus olitorius HOM05D000391 ORTHO05D000293 7.2e-10 67.4 85 44.7
unitig_26.g8821 Utricularia gibba HOM05D000391 ORTHO05D000293 7.2e-10 67.4 97 42.3
VMungo1127G0159 Vigna mungo HOM05D000391 ORTHO05D000293 7.2e-10 67.4 97 38.1
CsaV3_5G036590 Cucumis sativus L. HOM05D000391 ORTHO05D000293 9.4e-10 67.0 90 37.8
CiPaw.13G011800 Carya illinoinensis HOM05D000391 ORTHO05D000293 1.2e-09 66.6 93 37.6
Lsat_1_v5_gn_8_114261 Lactuca sativa HOM05D000391 ORTHO05D000293 1.2e-09 66.6 97 38.1
Nn7g36605 Nelumbo nucifera HOM05D000391 ORTHO05D000293 1.2e-09 66.6 97 44.3
ECA248G2356 Erigeron canadensis HOM05D000391 ORTHO05D000293 1.6e-09 66.2 89 37.1
CAN.G134.113 Capsicum annuum HOM05D000391 ORTHO05D000293 2.1e-09 65.9 90 41.1
CDE09G1235 Ceratophyllum demersum HOM05D000391 ORTHO05D000293 2.1e-09 65.9 84 41.7
Cc00_g03130 Coffea canephora HOM05D000391 ORTHO05D000293 2.1e-09 65.9 92 42.4
Nn2g14907 Nelumbo nucifera HOM05D000391 ORTHO05D000293 2.1e-09 65.9 90 37.8
PSO339G0918 Papaver somniferum HOM05D000391 ORTHO05D000293 2.1e-09 65.9 91 40.7
PSO384G0583 Papaver somniferum HOM05D000391 ORTHO05D000293 2.1e-09 65.9 91 40.7
arahy.Tifrunner.gnm1.ann1.WA33DT Arachis hypogaea HOM05D000391 ORTHO05D000293 2.7e-09 65.5 90 41.1
Medtr8g038150 Medicago truncatula HOM05D000391 ORTHO05D000293 2.7e-09 65.5 97 41.2
Sed0013226 Sechium edule HOM05D000391 ORTHO05D000293 2.7e-09 65.5 83 42.2
Dinv09253 Davidia involucrata HOM05D000391 ORTHO05D000293 4.7e-09 64.7 90 44.4
Gohir.D05G282400 Gossypium hirsutum HOM05D000391 ORTHO05D000293 4.7e-09 64.7 97 41.2
Peaxi162Scf00282g00013 Petunia axillaris HOM05D000391 ORTHO05D000293 6.1e-09 64.3 50 54.0
CANSAT56G1198 Cannabis sativa HOM05D000391 ORTHO05D000293 8.0e-09 63.9 97 39.2
MBI19_g32187_MAGBIO Magnolia biondii HOM05D000391 ORTHO05D000293 8.0e-09 63.9 92 38.0
Psat4g146920 Pisum sativum HOM05D000391 ORTHO05D000293 8.0e-09 63.9 97 37.1
Gorai.009G295800 Gossypium raimondii HOM05D000391 ORTHO05D000293 1.0e-08 63.5 86 40.7
Lj7A580T64 Lonicera japonica HOM05D000391 ORTHO05D000293 1.0e-08 63.5 97 41.2
TAR623G0378 Trochodendron aralioides HOM05D000391 ORTHO05D000293 1.0e-08 63.5 90 40.0
Atru.chr11.2430 Acer truncatum HOM05D000391 ORTHO05D000293 1.4e-08 63.2 97 37.1
arahy.Tifrunner.gnm1.ann1.KK07FU Arachis hypogaea HOM05D000391 ORTHO05D000293 1.4e-08 63.2 89 38.2
Migut.B01212 Erythranthe guttata HOM05D000391 ORTHO05D000293 1.4e-08 63.2 90 37.8
Gohir.A05G280500 Gossypium hirsutum HOM05D000391 ORTHO05D000293 1.4e-08 63.2 86 40.7
Hund13339 Selenicereus undatus HOM05D000391 ORTHO05D000293 1.4e-08 63.2 85 38.8
Aqoxy1G00340 Aquilegia oxysepala HOM05D000391 ORTHO05D000293 1.8e-08 62.8 92 38.0
Oeu015680.1 Olea europaea HOM05D000391 ORTHO05D000293 1.8e-08 62.8 82 41.5
Peaxi162Scf01260g00015 Petunia axillaris HOM05D000391 ORTHO05D000293 1.8e-08 62.8 90 40.0
SGA_v2.0_scaffold119G32805 Striga asiatica HOM05D000391 ORTHO05D000293 1.8e-08 62.8 97 40.2
SHI37245 Sapria himalayana HOM05D000391 ORTHO05D000293 3.0e-08 62.0 64 45.3
Lsat_1_v5_gn_8_114181 Lactuca sativa HOM05D000391 ORTHO05D000293 4.0e-08 61.6 91 36.3
EL10Ac2g02833 Beta vulgaris HOM05D000391 ORTHO05D000293 5.2e-08 61.2 97 37.1
ClCG03G012720 Citrullus lanatus HOM05D000391 ORTHO05D000293 6.7e-08 60.8 58 48.3
DCAR_031826 Daucus carota HOM05D000391 ORTHO05D000293 2.6e-07 58.9 96 37.5
Sed0015639 Sechium edule HOM05D000391 ORTHO05D000293 2.6e-07 58.9 97 40.2
GSVIVG01000286001 Vitis vinifera HOM05D000391 ORTHO05D000293 2.6e-07 58.9 90 40.0
Cpa.g.sc197.2 Carica papaya HOM05D000391 ORTHO05D000293 3.3e-07 58.5 75 41.3
Cfa010892 Carpinus fangiana HOM05D000391 ORTHO05D000293 3.3e-07 58.5 90 35.6
AUR62037213 Chenopodium quinoa HOM05D000391 ORTHO05D000293 3.3e-07 58.5 97 36.1
HPP92_019353 Vanilla planifolia HOM05D000391 ORTHO05D000293 3.3e-07 58.5 95 38.9
Ah.10g030720 Amaranthus hybridus HOM05D000391 ORTHO05D000293 4.4e-07 58.2 94 38.3
Eucgr.F02411 Eucalyptus grandis HOM05D000391 ORTHO05D000293 4.4e-07 58.2 97 36.1
vmacro13738 Vaccinium macrocarpon HOM05D000391 ORTHO05D000293 4.4e-07 58.2 87 35.6
ATR0753G076 Amborella trichopoda HOM05D000391 ORTHO05D000293 5.7e-07 57.8 97 34.0
Manes.04G165100 Manihot esculenta HOM05D000391 ORTHO05D000293 5.7e-07 57.8 97 37.1
GSVIVG01000282001 Vitis vinifera HOM05D000391 ORTHO05D000293 5.7e-07 57.8 97 40.2
GSVIVG01015823001 Vitis vinifera HOM05D000391 ORTHO05D000293 5.7e-07 57.8 97 40.2
Eucgr.F02431 Eucalyptus grandis HOM05D000391 ORTHO05D000293 7.5e-07 57.4 97 35.1
HanXRQChr15g0470901 Helianthus annuus HOM05D000391 ORTHO05D000293 7.5e-07 57.4 90 34.4
Lalb_Chr07g0185171 Lupinus albus HOM05D000391 ORTHO05D000293 7.5e-07 57.4 90 36.7
TPR.G25327 Trifolium pratense HOM05D000391 ORTHO05D000293 7.5e-07 57.4 95 36.8
Aqoxy2G00334 Aquilegia oxysepala HOM05D000391 ORTHO05D000293 9.7e-07 57.0 95 34.7
C09p64510 Brassica napus HOM05D000391 ORTHO05D000293 9.7e-07 57.0 95 35.8
BolC9t59285H Brassica oleracea HOM05D000391 ORTHO05D000293 9.7e-07 57.0 95 35.8
BraA10t44608Z Brassica rapa HOM05D000391 ORTHO05D000293 9.7e-07 57.0 95 35.8
CDE05G0745 Ceratophyllum demersum HOM05D000391 ORTHO05D000293 9.7e-07 57.0 95 35.8
AUR62026840 Chenopodium quinoa HOM05D000391 ORTHO05D000293 9.7e-07 57.0 97 34.0
Ca_12411_v3 Cicer arietinum L. HOM05D000391 ORTHO05D000293 9.7e-07 57.0 95 36.8
Oeu002175.1 Olea europaea HOM05D000391 ORTHO05D000293 9.7e-07 57.0 97 38.1
ATR0753G072 Amborella trichopoda HOM05D000391 ORTHO05D000293 1.3e-06 56.6 97 33.0
Rhsim07G0064900 Rhododendron simsii HOM05D000391 ORTHO05D000293 1.3e-06 56.6 97 37.1
Eucgr.F02423 Eucalyptus grandis HOM05D000391 ORTHO05D000293 1.7e-06 56.2 97 35.1
Prupe.1G515200 Prunus persica HOM05D000391 ORTHO05D000293 1.7e-06 56.2 90 33.3
QL06p049559 Quercus lobata HOM05D000391 ORTHO05D000293 1.7e-06 56.2 92 33.7
A03p21580 Brassica napus HOM05D000391 ORTHO05D000293 2.2e-06 55.8 92 32.6
Dinv13186 Davidia involucrata HOM05D000391 ORTHO05D000293 2.2e-06 55.8 97 37.1
Nitab4.5_0001449g0010 Nicotiana tabacum HOM05D000391 ORTHO05D000293 2.2e-06 55.8 48 50.0
PSO447G0082 Papaver somniferum HOM05D000391 ORTHO05D000293 2.2e-06 55.8 93 36.6
SalBow5G1354 Salvia bowleyana HOM05D000391 ORTHO05D000293 2.2e-06 55.8 97 39.2
THA.LOC104824185 Tarenaya hassleriana HOM05D000391 ORTHO05D000293 2.2e-06 55.8 92 32.6
Aa31LG5G20920 Aethionema arabicum HOM05D000391 ORTHO05D000293 2.8e-06 55.5 96 34.4
C03p25580 Brassica napus HOM05D005646 ORTHO05D006828 2.8e-06 55.5 92 32.6
BolC3t14945H Brassica oleracea HOM05D000391 ORTHO05D000293 2.8e-06 55.5 92 32.6
BraA03t11394Z Brassica rapa HOM05D000391 ORTHO05D000293 2.8e-06 55.5 92 32.6
Carub.0006s1088 Capsella rubella HOM05D000391 ORTHO05D000293 2.8e-06 55.5 95 35.8
Sed0021163 Sechium edule HOM05D000391 ORTHO05D000293 2.8e-06 55.5 58 43.1
A10p25440 Brassica napus HOM05D000391 ORTHO05D000293 3.7e-06 55.1 91 35.2
BraA10t44784Z Brassica rapa HOM05D000391 ORTHO05D000293 3.7e-06 55.1 97 37.1
Duzib106G1485 Durio zibethinus HOM05D000391 ORTHO05D000293 3.7e-06 55.1 58 46.6
Thhalv10014146m.g Eutrema salsugineum HOM05D000391 ORTHO05D000293 3.7e-06 55.1 58 43.1
Lj4g0022424 Lotus japonicus HOM05D000391 ORTHO05D000293 3.7e-06 55.1 97 37.1
Peaxi162Scf00295g01019 Petunia axillaris HOM05D000391 ORTHO05D000293 3.7e-06 55.1 91 37.4
Solyc10g047240.2 Solanum lycopersicum HOM05D000391 ORTHO05D000293 3.7e-06 55.1 48 47.9
Sopen10g017470 Solanum pennellii HOM05D000391 ORTHO05D000293 3.7e-06 55.1 48 47.9
TPR.G9104 Trifolium pratense HOM05D000391 ORTHO05D000293 3.7e-06 55.1 95 32.6
Aqoxy2G00333 Aquilegia oxysepala HOM05D000391 ORTHO05D000293 4.8e-06 54.7 95 32.6
arahy.Tifrunner.gnm1.ann1.FUP8YM Arachis hypogaea HOM05D000391 ORTHO05D000293 4.8e-06 54.7 97 34.0
Carub.0004s2076 Capsella rubella HOM05D000391 ORTHO05D000293 4.8e-06 54.7 49 44.9
Glyma.13G088700 Glycine max HOM05D000391 ORTHO05D000293 4.8e-06 54.7 95 36.8
Peaxi162Scf00108g00119 Petunia axillaris HOM05D000391 ORTHO05D000293 4.8e-06 54.7 58 43.1
SalBow5G2147 Salvia bowleyana HOM05D000391 ORTHO05D000293 4.8e-06 54.7 92 29.3
PGSC0003DMG400016665 Solanum tuberosum HOM05D000391 ORTHO05D000293 4.8e-06 54.7 48 47.9
GSVIVG01000307001 Vitis vinifera HOM05D000391 ORTHO05D000293 4.8e-06 54.7 45 62.2
Aa31LG3G14850 Aethionema arabicum HOM05D000391 ORTHO05D000293 6.3e-06 54.3 58 44.8
Cc07_g15280 Coffea canephora HOM05D000391 ORTHO05D000293 6.3e-06 54.3 97 34.0
MELO3C015135.2 Cucumis melo HOM05D000391 ORTHO05D000293 6.3e-06 54.3 58 41.4
Lsat_1_v5_gn_5_43401 Lactuca sativa HOM05D000391 ORTHO05D000293 6.3e-06 54.3 97 38.1
Nitab4.5_0000080g0270 Nicotiana tabacum HOM05D000391 ORTHO05D000293 6.3e-06 54.3 48 47.9
PSO210G5470 Papaver somniferum HOM05D000391 ORTHO05D000293 6.3e-06 54.3 93 36.6
Thecc.08G108100 Theobroma cacao HOM05D000391 ORTHO05D000293 6.3e-06 54.3 97 35.1
Ah.06g194470 Amaranthus hybridus HOM05D000391 ORTHO05D000293 8.2e-06 53.9 96 35.4
A10p27330 Brassica napus HOM05D000391 ORTHO05D000293 8.2e-06 53.9 97 36.1
AUR62039830 Chenopodium quinoa HOM05D000391 ORTHO05D000293 8.2e-06 53.9 62 38.7
Haze_03063 Corylus avellana HOM05D000391 ORTHO05D000293 8.2e-06 53.9 79 39.2
MELO3C018648.2 Cucumis melo HOM05D000391 ORTHO05D000293 8.2e-06 53.9 97 35.1
CsaV3_1G043240 Cucumis sativus L. HOM05D000391 ORTHO05D000293 8.2e-06 53.9 58 41.4
MBI19_g19194_MAGBIO Magnolia biondii HOM05D000391 ORTHO05D000293 8.2e-06 53.9 95 35.8
Manes.18G068000 Manihot esculenta HOM05D000391 ORTHO05D000293 8.2e-06 53.9 97 35.1
Peaxi162Scf00471g01111 Petunia axillaris HOM05D000391 ORTHO05D000293 8.2e-06 53.9 48 52.1
SalBow5G2162 Salvia bowleyana HOM05D000391 ORTHO05D000293 8.2e-06 53.9 90 37.8


User provided reference genes

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