Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.XHZZ6B Arachis hypogaea HOM05D004638 ORTHO05D005443 3.1e-160 568.5 319 100.0
arahy.Tifrunner.gnm1.ann1.L9DXTM Arachis hypogaea HOM05D004638 ORTHO05D005443 1.2e-71 274.2 338 62.4
Glyma.19G074500 Glycine max HOM05D004638 ORTHO05D005443 5.7e-53 212.2 316 48.1
VMungo1215G0894 Vigna mungo HOM05D004638 ORTHO05D005443 7.0e-51 205.3 313 49.8
Duzib052G1194 Durio zibethinus HOM05D004638 ORTHO05D005443 5.2e-46 189.1 342 41.8
Glyma.05G075900 Glycine max HOM05D004638 ORTHO05D005443 5.7e-45 185.7 315 49.2
Phvul.003G100800 Phaseolus vulgaris HOM05D004638 ORTHO05D005443 4.9e-44 182.6 333 43.2
ClCG06G018050 Citrullus lanatus HOM05D004638 ORTHO05D005443 2.4e-43 180.3 314 42.0
Lalb_Chr11g0063191 Lupinus albus HOM05D004638 ORTHO05D005443 4.1e-43 179.5 299 47.5
Medtr5g012820 Medicago truncatula HOM05D004638 ORTHO05D005443 4.1e-43 179.5 350 42.9
Thecc.04G268000 Theobroma cacao HOM05D004638 ORTHO05D005443 4.1e-43 179.5 311 44.4
TPR.G7963 Trifolium pratense HOM05D004638 ORTHO05D005443 4.1e-43 179.5 310 45.2
Lalb_Chr08g0244981 Lupinus albus HOM05D004638 ORTHO05D005443 7.0e-43 178.7 313 45.0
Cfa014805 Carpinus fangiana HOM05D004638 ORTHO05D005443 2.7e-42 176.8 342 41.2
CiPaw.01G176300 Carya illinoinensis HOM05D004638 ORTHO05D005443 4.5e-42 176.0 313 43.1
Gohir.A09G230500 Gossypium hirsutum HOM05D004638 ORTHO05D005443 7.7e-42 175.3 309 43.0
Duzib212G0972 Durio zibethinus HOM05D004638 ORTHO05D005443 1.3e-41 174.5 315 43.8
Haze_11486 Corylus avellana HOM05D004638 ORTHO05D005443 2.9e-41 173.3 342 45.3
Gohir.D09G231600 Gossypium hirsutum HOM05D004638 ORTHO05D005443 5.0e-41 172.6 309 43.0
Gorai.006G254300 Gossypium raimondii HOM05D004638 ORTHO05D005443 5.0e-41 172.6 309 43.0
CsaV3_1G000420 Cucumis sativus L. HOM05D004638 ORTHO05D005443 6.6e-41 172.2 312 40.7
COL.COLO4_15993 Corchorus olitorius HOM05D004638 ORTHO05D005443 8.6e-41 171.8 314 43.3
MELO3C026193.2 Cucumis melo HOM05D004638 ORTHO05D005443 8.6e-41 171.8 312 42.0
QL06p021792 Quercus lobata HOM05D004638 ORTHO05D005443 8.6e-41 171.8 311 42.4
FvH4_2g18960 Fragaria vesca HOM05D004638 ORTHO05D005443 2.5e-40 170.2 318 43.1
CANSAT01G0932 Cannabis sativa HOM05D004638 ORTHO05D005443 7.3e-40 168.7 314 46.8
CANSAT01G3035 Cannabis sativa HOM05D004638 ORTHO05D005443 7.3e-40 168.7 314 46.8
FAN24G1523 Fragaria x ananassa HOM05D004638 ORTHO05D005443 1.6e-39 167.5 318 42.8
FAN22G0870 Fragaria x ananassa HOM05D004638 ORTHO05D005443 2.1e-39 167.2 318 42.1
Psat2g177000 Pisum sativum HOM05D004638 ORTHO05D005443 4.7e-39 166.0 353 40.5
Ciclev10025979m.g Citrus clementina HOM05D004638 ORTHO05D005443 6.1e-39 165.6 312 39.4
Haze_15400 Corylus avellana HOM05D004638 ORTHO05D005443 6.1e-39 165.6 342 40.9
Haze_15402 Corylus avellana HOM05D004638 ORTHO05D005443 6.1e-39 165.6 342 40.9
Lj4g0009002 Lotus japonicus HOM05D004638 ORTHO05D005443 1.4e-38 164.5 339 47.8
FAN17G1367 Fragaria x ananassa HOM05D004638 ORTHO05D005443 1.8e-38 164.1 317 42.3
TWI53G1292 Tripterygium wilfordii HOM05D004638 ORTHO05D005443 3.0e-38 163.3 310 39.4
Cpa.g.c29962.1 Carica papaya HOM05D004638 ORTHO05D005443 4.4e-37 159.5 311 45.3
PGR142G1578 Punica granatum HOM05D004638 ORTHO05D005443 9.8e-37 158.3 309 39.2
Atru.chr4.1922 Acer truncatum HOM05D004638 ORTHO05D005443 2.2e-36 157.1 317 41.3
Ca_03509_v3 Cicer arietinum L. HOM05D004638 ORTHO05D005443 2.9e-36 156.8 338 39.6
TPR.G18128 Trifolium pratense HOM05D004638 ORTHO05D005443 2.4e-35 153.7 377 37.7
RcHm_v2.0_Chr4g0395981 Rosa chinensis HOM05D004638 ORTHO05D005443 3.2e-35 153.3 318 40.6
Sed0011634 Sechium edule HOM05D004638 ORTHO05D005443 4.1e-35 152.9 353 37.4
Hma1.2p1_0751F.1_g212710 Hydrangea macrophylla HOM05D004638 ORTHO05D005443 5.4e-35 152.5 317 41.6
FvH4_4g05060 Fragaria vesca HOM05D004638 ORTHO05D005443 7.0e-35 152.1 318 40.6
FAN12G0885 Fragaria x ananassa HOM05D004638 ORTHO05D005443 7.0e-35 152.1 318 40.6
Ah.16g102130 Amaranthus hybridus HOM05D004638 ORTHO05D005443 3.5e-34 149.8 309 38.8
Manes.15G046900 Manihot esculenta HOM05D004638 ORTHO05D005443 3.5e-34 149.8 310 38.1
Atru.chr2.74 Acer truncatum HOM05D004638 ORTHO05D005443 4.6e-34 149.4 318 39.3
ClCG06G007330 Citrullus lanatus HOM05D004638 ORTHO05D005443 7.8e-34 148.7 315 38.1
FAN15G0747 Fragaria x ananassa HOM05D004638 ORTHO05D005443 1.0e-33 148.3 318 39.6
TAR623G0129 Trochodendron aralioides HOM05D004638 ORTHO05D005443 1.0e-33 148.3 300 40.3
Prupe.1G051000 Prunus persica HOM05D004638 ORTHO05D005443 1.3e-33 147.9 313 39.3
CsaV3_2G012340 Cucumis sativus L. HOM05D004638 ORTHO05D005443 1.7e-33 147.5 344 36.0
THA.LOC104800549 Tarenaya hassleriana HOM05D004638 ORTHO05D005443 2.3e-33 147.1 320 38.8
Aa31LG11G6060 Aethionema arabicum HOM05D004638 ORTHO05D005443 3.0e-33 146.7 325 38.5
MELO3C023050.2 Cucumis melo HOM05D004638 ORTHO05D005443 8.6e-33 145.2 349 35.5
DCAR_007662 Daucus carota HOM05D004638 ORTHO05D005443 1.5e-32 144.4 295 41.0
MD16G1229100 Malus domestica HOM05D004638 ORTHO05D005443 2.5e-32 143.7 323 38.1
CiPaw.02G105500 Carya illinoinensis HOM05D004638 ORTHO05D005443 4.3e-32 142.9 313 38.7
Lj2C17T3 Lonicera japonica HOM05D004638 ORTHO05D005443 4.3e-32 142.9 329 38.9
arahy.Tifrunner.gnm1.ann1.EFW0VL Arachis hypogaea HOM05D004638 ORTHO05D005443 5.6e-32 142.5 149 60.4
Eucgr.H01383 Eucalyptus grandis HOM05D004638 ORTHO05D005443 7.3e-32 142.1 342 35.7
Thhalv10013953m.g Eutrema salsugineum HOM05D004638 ORTHO05D005443 7.3e-32 142.1 319 38.2
Sp6g37620 Schrenkiella parvula HOM05D004638 ORTHO05D005443 7.3e-32 142.1 316 39.2
BraA02t04837Z Brassica rapa HOM05D004638 ORTHO05D005443 1.6e-31 141.0 322 37.9
SalBow5G3921 Salvia bowleyana HOM05D004638 ORTHO05D005443 2.1e-31 140.6 294 39.5
C02p02210 Brassica napus HOM05D004638 ORTHO05D005443 2.8e-31 140.2 322 38.2
BcaB01g05944 Brassica carinata HOM05D004638 ORTHO05D005443 4.7e-31 139.4 313 38.7
BcaC03g13151 Brassica carinata HOM05D004638 ORTHO05D005443 4.7e-31 139.4 326 38.3
A03p02250 Brassica napus HOM05D004638 ORTHO05D005443 4.7e-31 139.4 314 38.9
BolC2t06190H Brassica oleracea HOM05D004638 ORTHO05D005443 4.7e-31 139.4 326 38.3
BolC3t12811H Brassica oleracea HOM05D004638 ORTHO05D005443 4.7e-31 139.4 314 39.2
BraA03t09589Z Brassica rapa HOM05D004638 ORTHO05D005443 4.7e-31 139.4 314 38.9
GSVIVG01027946001 Vitis vinifera HOM05D004638 ORTHO05D005443 6.2e-31 139.0 323 37.5
AL6G15050 Arabidopsis lyrata HOM05D004638 ORTHO05D005443 8.0e-31 138.7 346 36.1
Dinv31214 Davidia involucrata HOM05D001005 ORTHO05D000836 1.0e-30 138.3 301 38.9
HPP92_027401 Vanilla planifolia HOM05D004638 ORTHO05D005443 1.0e-30 138.3 326 36.2
Carub.0006s0414 Capsella rubella HOM05D004638 ORTHO05D005443 2.3e-30 137.1 334 36.8
Potri.010G064100 Populus trichocarpa HOM05D004638 ORTHO05D005443 3.1e-30 136.7 311 37.9
C03p02590 Brassica napus HOM05D004638 ORTHO05D005443 5.2e-30 136.0 317 38.2
TWI73G0168 Tripterygium wilfordii HOM05D004638 ORTHO05D005443 8.9e-30 135.2 312 37.5
CARHR208030 Cardamine hirsuta HOM05D004638 ORTHO05D005443 1.5e-29 134.4 322 36.3
BcaB05g21727 Brassica carinata HOM05D004638 ORTHO05D005443 5.8e-29 132.5 312 37.2
CDE07G1349 Ceratophyllum demersum HOM05D002308 ORTHO05D005297 1.7e-28 131.0 260 40.0
EL10Ac2g04652 Beta vulgaris HOM05D004638 ORTHO05D005443 2.9e-28 130.2 314 36.3
ATR0051G063 Amborella trichopoda HOM05D004638 ORTHO05D005443 3.7e-28 129.8 312 36.9
BcaB01g05717 Brassica carinata HOM05D004638 ORTHO05D005443 3.7e-28 129.8 325 35.4
Medtr2g079000 Medicago truncatula HOM05D004638 ORTHO05D005443 3.7e-28 129.8 205 49.8
SGA_v2.0_scaffold21G09643 Striga asiatica HOM05D004638 ORTHO05D005443 1.1e-27 128.3 313 36.7
Rhsim09G0102800 Rhododendron simsii HOM05D003876 ORTHO05D005443 1.9e-27 127.5 325 36.6
Sabra10G0042900 Salix brachista HOM05D004638 ORTHO05D005443 2.4e-27 127.1 310 40.3
Lj3g0004611 Lotus japonicus HOM05D004638 ORTHO05D005443 4.1e-27 126.3 230 51.7
Sc06g0001700 Simmondsia chinensis HOM05D004638 ORTHO05D005443 5.4e-27 125.9 324 38.3
Potri.008G173300 Populus trichocarpa HOM05D004638 ORTHO05D005443 7.0e-27 125.6 310 40.6
AT5G05210 Arabidopsis thaliana HOM05D004638 ORTHO05D005443 1.6e-26 124.4 374 33.7
Peaxi162Scf00048g00171 Petunia axillaris HOM05D004638 ORTHO05D005443 7.8e-26 122.1 314 37.6
CDE06G2325 Ceratophyllum demersum HOM05D004638 ORTHO05D005443 1.0e-25 121.7 302 37.1
SGA_v2.0_scaffold41G15829 Striga asiatica HOM05D004638 ORTHO05D005443 1.0e-25 121.7 310 37.1
PGSC0003DMG400013656 Solanum tuberosum HOM05D004638 ORTHO05D005443 1.7e-25 120.9 312 36.5
Aqoxy5G00949 Aquilegia oxysepala HOM05D004638 ORTHO05D005443 1.1e-24 118.2 315 37.5
MSTRG.13923 Avicennia marina HOM05D004638 ORTHO05D005443 1.5e-24 117.9 311 38.9
MSTRG.26536 Avicennia marina HOM05D004638 ORTHO05D005443 1.5e-24 117.9 311 38.9
MD13G1224300 Malus domestica HOM05D004638 ORTHO05D005443 4.3e-24 116.3 274 37.6
Migut.L01893 Erythranthe guttata HOM05D004638 ORTHO05D005443 7.3e-24 115.5 317 35.0
Carub.0004s0850 Capsella rubella HOM05D004638 ORTHO05D005443 3.6e-23 113.2 267 40.1
AUR62014564 Chenopodium quinoa HOM05D004638 ORTHO05D005443 4.7e-23 112.8 240 45.4
Nitab4.5_0001815g0110 Nicotiana tabacum HOM05D004638 ORTHO05D005443 6.2e-23 112.5 321 37.4
Oeu017919.1 Olea europaea HOM05D004638 ORTHO05D005443 8.1e-23 112.1 331 34.1
CSS0022021 Camellia sinensis var. sinensis HOM05D004638 ORTHO05D005443 3.1e-22 110.2 257 39.7
ECA246G4403 Erigeron canadensis HOM05D004638 ORTHO05D005443 8.9e-22 108.6 320 32.8
Sopen02g026790 Solanum pennellii HOM05D004638 ORTHO05D005443 1.5e-21 107.8 312 34.3
Lsat_1_v5_gn_9_30280 Lactuca sativa HOM05D004638 ORTHO05D005443 2.0e-21 107.5 319 32.0
Solyc02g082130.2 Solanum lycopersicum HOM05D004638 ORTHO05D005443 2.6e-21 107.1 313 34.2
Nitab4.5_0000614g0010 Nicotiana tabacum HOM05D004638 ORTHO05D005443 7.5e-21 105.5 321 34.6
HanXRQChr11g0320631 Helianthus annuus HOM05D004638 ORTHO05D005443 4.1e-19 99.8 321 32.1
Zm00001eb248040 Zea mays HOM05D004638 ORTHO05D005443 7.1e-19 99.0 341 32.6
Actinidia22435 Actinidia chinensis HOM05D004638 ORTHO05D005443 9.2e-19 98.6 125 50.4
AT2G27750 Arabidopsis thaliana HOM05D004638 ORTHO05D005443 1.0e-17 95.1 126 47.6
AL4G22550 Arabidopsis lyrata HOM05D004638 ORTHO05D005443 2.3e-17 94.0 229 34.5
HanXRQChr14g0438771 Helianthus annuus HOM05D004638 ORTHO05D005443 3.9e-17 93.2 322 31.7
Cc04_g09510 Coffea canephora HOM05D004638 ORTHO05D005443 9.5e-16 88.6 331 37.5
Oeu016931.1 Olea europaea HOM05D004638 ORTHO05D005443 1.6e-15 87.8 237 43.5
Atru.chr4.1888 Acer truncatum HOM05D004638 ORTHO05D005443 6.2e-15 85.9 199 38.2
SEGI_31736 Sequoiadendron giganteum HOM05D004638 ORTHO05D005443 2.0e-13 80.9 320 34.7
Lj3g0021975 Lotus japonicus HOM05D004638 ORTHO05D005443 2.6e-13 80.5 145 48.3
COL.COLO4_32263 Corchorus olitorius HOM05D004638 ORTHO05D005443 3.4e-13 80.1 312 32.7
Mapoly0122s0042 Marchantia polymorpha HOM05D004638 ORTHO05D005443 5.8e-13 79.3 327 28.7
Os05g0372200 Oryza sativa ssp. japonica HOM05D004638 ORTHO05D005443 7.1e-11 72.4 349 31.5
AUR62039396 Chenopodium quinoa HOM05D004638 ORTHO05D005443 2.1e-10 70.9 103 47.6
SMO119G0466 Selaginella moellendorffii HOM05D004638 ORTHO05D005443 7.8e-10 68.9 317 31.9
CAN.G809.17 Capsicum annuum HOM05D004638 ORTHO05D005443 3.0e-09 67.0 317 29.3
unitig_22.g5967 Utricularia gibba HOM05D004638 ORTHO05D005443 3.9e-09 66.6 101 41.6
Pp3c8_4010 Physcomitrium patens HOM05D004638 ORTHO05D005443 8.6e-09 65.5 316 31.6
arahy.Tifrunner.gnm1.ann1.KU7VJQ Arachis hypogaea HOM05D000932 ORTHO05D000729 2.5e-08 63.9 30 90.0
Nn4g24624 Nelumbo nucifera HOM05D004638 ORTHO05D005443 3.3e-08 63.5 203 33.5
arahy.Tifrunner.gnm1.ann1.AE0X9Y Arachis hypogaea HOM05D000932 ORTHO05D000729 1.2e-07 61.6 30 90.0
Actinidia06751 Actinidia chinensis HOM05D004638 ORTHO05D005443 1.1e-06 58.5 233 32.6
CBR_g30748 Chara braunii HOM05D003542 ORTHO05D004799 3.1e-06 57.0 138 45.7
Medtr2g079040 Medicago truncatula HOM05D004638 ORTHO05D005443 3.1e-06 57.0 48 68.8


User provided reference genes

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