Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.XG3Z2D Arachis hypogaea HOM05D000094 ORTHO05D082282 4.2e-122 441.4 232 100.0
Glyma.04G218300 Glycine max HOM05D000094 ORTHO05D001414 1.1e-10 71.2 60 56.7
Glyma.06G147600 Glycine max HOM05D000094 ORTHO05D001414 1.7e-09 67.4 59 54.2
Manes.13G086700 Manihot esculenta HOM05D000094 ORTHO05D001414 2.8e-09 66.6 60 55.0
Actinidia12219 Actinidia chinensis HOM05D000094 ORTHO05D001414 4.8e-09 65.9 83 43.4
EL10Ac2g04792 Beta vulgaris HOM05D000094 ORTHO05D001414 6.3e-09 65.5 59 54.2
Manes.12G144800 Manihot esculenta HOM05D000094 ORTHO05D001414 1.1e-08 64.7 60 53.3
MSTRG.2522 Avicennia marina HOM05D000094 ORTHO05D001414 2.4e-08 63.5 109 35.8
CiPaw.03G132300 Carya illinoinensis HOM05D000094 ORTHO05D001414 3.1e-08 63.2 59 50.8
Dinv04770 Davidia involucrata HOM05D000094 ORTHO05D001414 4.1e-08 62.8 57 50.9
Dinv19462 Davidia involucrata HOM05D000094 ORTHO05D001414 5.3e-08 62.4 59 49.2
Gohir.D03G047100 Gossypium hirsutum HOM05D000094 ORTHO05D001414 5.3e-08 62.4 59 54.2
Gohir.A02G136300 Gossypium hirsutum HOM05D000094 ORTHO05D001414 1.2e-07 61.2 59 52.5
Gorai.003G048200 Gossypium raimondii HOM05D000094 ORTHO05D001414 1.2e-07 61.2 59 52.5
QL06p031490 Quercus lobata HOM05D000094 ORTHO05D001414 1.5e-07 60.8 56 50.0
Lalb_Chr13g0296281 Lupinus albus HOM05D000094 ORTHO05D001414 3.4e-07 59.7 90 43.3
MD01G1014200 Malus domestica HOM05D000094 ORTHO05D001414 3.4e-07 59.7 62 46.8
Ah.02g123710 Amaranthus hybridus HOM05D000094 ORTHO05D001414 4.5e-07 59.3 57 50.9
Potri.005G086500 Populus trichocarpa HOM05D000094 ORTHO05D001414 4.5e-07 59.3 60 50.0
EL10Ac6g15221 Beta vulgaris HOM05D000094 ORTHO05D001414 7.7e-07 58.5 56 51.8
CAN.G860.7 Capsicum annuum HOM05D000094 ORTHO05D001414 1.0e-06 58.2 59 52.5
Gohir.A11G224700 Gossypium hirsutum HOM05D000094 ORTHO05D001414 1.0e-06 58.2 60 51.7
Nitab4.5_0005374g0010 Nicotiana tabacum HOM05D000094 ORTHO05D001414 1.0e-06 58.2 58 53.4
Nitab4.5_0000184g0090 Nicotiana tabacum HOM05D000094 ORTHO05D001414 2.2e-06 57.0 58 51.7
Solyc04g051510.1 Solanum lycopersicum HOM05D000094 ORTHO05D001414 2.9e-06 56.6 59 50.8
Sopen04g022890 Solanum pennellii HOM05D000094 ORTHO05D001414 2.9e-06 56.6 59 50.8
Rhsim08G0005000 Rhododendron simsii HOM05D000094 ORTHO05D001414 6.5e-06 55.5 50 50.0
TPR.G22675 Trifolium pratense HOM05D000094 ORTHO05D001414 6.5e-06 55.5 63 46.0
Gohir.A11G054100 Gossypium hirsutum HOM05D000094 ORTHO05D001414 8.5e-06 55.1 59 52.5


User provided reference genes

Program Settings