Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.V4TZMI Arachis hypogaea HOM05D003418 ORTHO05D004105 7.7e-63 243.8 138 100.0
arahy.Tifrunner.gnm1.ann1.XFVS70 Arachis hypogaea HOM05D003418 ORTHO05D004105 7.7e-63 243.8 138 100.0
Glyma.19G093400 Glycine max HOM05D003418 ORTHO05D004105 3.7e-25 118.6 139 54.0
TPR.G29062 Trifolium pratense HOM05D003418 ORTHO05D004105 2.9e-22 109.0 130 57.7
Medtr7g028805 Medicago truncatula HOM05D003418 ORTHO05D004105 8.9e-19 97.4 127 55.9
Lj1g0017862 Lotus japonicus HOM05D003418 ORTHO05D004105 2.6e-18 95.9 136 54.4
TWI18G0155 Tripterygium wilfordii HOM05D003418 ORTHO05D004105 1.0e-14 84.0 129 44.2
Nn4g22281 Nelumbo nucifera HOM05D003418 ORTHO05D004105 1.3e-14 83.6 123 45.5
Eucgr.I01636 Eucalyptus grandis HOM05D003418 ORTHO05D004105 5.0e-14 81.6 117 47.9
TAR629G2062 Trochodendron aralioides HOM05D003418 ORTHO05D004105 1.1e-13 80.5 119 43.7
MBI11_g22683_MAGBIO Magnolia biondii HOM05D003418 ORTHO05D004105 1.5e-13 80.1 128 43.0
Cfa007215 Carpinus fangiana HOM05D003418 ORTHO05D004105 2.5e-13 79.3 110 47.3
Haze_14888 Corylus avellana HOM05D003418 ORTHO05D004105 3.3e-13 79.0 110 46.4
Rhsim08G0042100 Rhododendron simsii HOM05D003418 ORTHO05D004105 3.3e-13 79.0 120 43.3
CANSAT01G2188 Cannabis sativa HOM05D003418 ORTHO05D004105 5.6e-13 78.2 116 47.4
Haze_12439 Corylus avellana HOM05D003418 ORTHO05D004105 9.5e-13 77.4 129 43.4
TAR374G1678 Trochodendron aralioides HOM05D003418 ORTHO05D004105 9.5e-13 77.4 118 46.6
AUR62017773 Chenopodium quinoa HOM05D003418 ORTHO05D004105 1.6e-12 76.6 109 45.0
Aa31LG7G9910 Aethionema arabicum HOM05D003418 ORTHO05D004105 4.7e-12 75.1 125 39.2
CiPaw.03G057000 Carya illinoinensis HOM05D003418 ORTHO05D004105 4.7e-12 75.1 127 41.7
Nn3g16424 Nelumbo nucifera HOM05D003418 ORTHO05D004105 6.2e-12 74.7 111 43.2
CsaV3_6G008230 Cucumis sativus L. HOM05D003418 ORTHO05D004105 1.1e-11 73.9 117 41.9
CiPaw.06G104400 Carya illinoinensis HOM05D003418 ORTHO05D004105 1.8e-11 73.2 119 42.0
THA.LOC104825492 Tarenaya hassleriana HOM05D003418 ORTHO05D004105 1.8e-11 73.2 127 40.9
FAN17G2596 Fragaria x ananassa HOM05D003418 ORTHO05D004105 4.0e-11 72.0 122 42.6
Lsat_1_v5_gn_3_30720 Lactuca sativa HOM05D000660 ORTHO05D000766 4.0e-11 72.0 111 41.4
Hma1.2p1_0065F.1_g035230 Hydrangea macrophylla HOM05D003418 ORTHO05D004105 5.2e-11 71.6 110 42.7
MBI07_g11273_MAGBIO Magnolia biondii HOM05D003418 ORTHO05D004105 5.2e-11 71.6 122 43.4
Aqoxy3G01580 Aquilegia oxysepala HOM05D003418 ORTHO05D004105 6.8e-11 71.2 124 50.8
Lsat_1_v5_gn_4_781 Lactuca sativa HOM05D003418 ORTHO05D004105 6.8e-11 71.2 113 40.7
MD16G1121700 Malus domestica HOM05D003418 ORTHO05D004105 6.8e-11 71.2 115 44.3
Prupe.1G223700 Prunus persica HOM05D003418 ORTHO05D004105 6.8e-11 71.2 124 41.9
Thecc.02G204700 Theobroma cacao HOM05D003418 ORTHO05D004105 6.8e-11 71.2 126 41.3
CiPaw.05G107800 Carya illinoinensis HOM05D003418 ORTHO05D004105 8.9e-11 70.9 129 45.0
Ciclev10032970m.g Citrus clementina HOM05D003418 ORTHO05D004105 8.9e-11 70.9 119 40.3
MELO3C022314.2 Cucumis melo HOM05D003418 ORTHO05D004105 8.9e-11 70.9 117 40.2
Duzib251G0418 Durio zibethinus HOM05D003418 ORTHO05D004105 8.9e-11 70.9 126 40.5
QL03p052131 Quercus lobata HOM05D003418 ORTHO05D004105 8.9e-11 70.9 124 46.0
EL10Ac6g15425 Beta vulgaris HOM05D000704 ORTHO05D000526 1.2e-10 70.5 121 43.8
Duzib268G0386 Durio zibethinus HOM05D003418 ORTHO05D004105 1.2e-10 70.5 126 38.9
Cc07_g00970 Coffea canephora HOM05D003418 ORTHO05D004105 2.0e-10 69.7 122 45.1
FvH4_4g23540 Fragaria vesca HOM05D003418 ORTHO05D004105 2.0e-10 69.7 114 43.0
RcHm_v2.0_Chr4g0429941 Rosa chinensis HOM05D003418 ORTHO05D004105 2.0e-10 69.7 117 47.0
Ciclev10017602m.g Citrus clementina HOM05D003418 ORTHO05D004105 2.6e-10 69.3 128 41.4
CANSAT64G1003 Cannabis sativa HOM05D003418 ORTHO05D004105 3.4e-10 68.9 142 41.5
Carub.0001s2582 Capsella rubella HOM05D003418 ORTHO05D004105 3.4e-10 68.9 124 37.1
Ca_16446_v3 Cicer arietinum L. HOM05D003418 ORTHO05D004105 4.4e-10 68.6 111 40.5
HanXRQChr06g0174711 Helianthus annuus HOM05D003418 ORTHO05D004105 4.4e-10 68.6 119 42.0
Dinv17578 Davidia involucrata HOM05D003418 ORTHO05D004105 5.8e-10 68.2 120 39.2
FAN07G2322 Fragaria x ananassa HOM05D003418 ORTHO05D004105 5.8e-10 68.2 112 42.0
AT1G27290 Arabidopsis thaliana HOM05D003418 ORTHO05D004105 7.5e-10 67.8 117 38.5
CSS0043963 Camellia sinensis var. sinensis HOM05D003418 ORTHO05D004105 7.5e-10 67.8 127 42.5
Dinv11681 Davidia involucrata HOM05D003418 ORTHO05D004105 7.5e-10 67.8 120 40.8
Sopen05g011160 Solanum pennellii HOM05D003418 ORTHO05D004105 7.5e-10 67.8 114 36.0
HanXRQChr05g0128721 Helianthus annuus HOM05D003418 ORTHO05D004105 9.8e-10 67.4 110 40.0
MD13G1121400 Malus domestica HOM05D003418 ORTHO05D004105 9.8e-10 67.4 120 44.2
Solyc05g015710.3 Solanum lycopersicum HOM05D003418 ORTHO05D004105 9.8e-10 67.4 114 36.0
PGSC0003DMG401021901 Solanum tuberosum HOM05D003418 ORTHO05D004105 9.8e-10 67.4 114 36.0
AL1G40690 Arabidopsis lyrata HOM05D003418 ORTHO05D004105 1.3e-09 67.0 116 37.9
EL10Ac6g13525 Beta vulgaris HOM05D003418 ORTHO05D004105 1.3e-09 67.0 108 45.4
Cc11_g17090 Coffea canephora HOM05D003418 ORTHO05D004105 1.3e-09 67.0 119 41.2
Glyma.11G252200 Glycine max HOM05D003418 ORTHO05D004105 1.7e-09 66.6 109 42.2
Actinidia04435 Actinidia chinensis HOM05D003418 ORTHO05D004105 2.2e-09 66.2 110 41.8
FAN12G4113 Fragaria x ananassa HOM05D003418 ORTHO05D004105 2.2e-09 66.2 111 43.2
Lj6g0011251 Lotus japonicus HOM05D003418 ORTHO05D004105 2.2e-09 66.2 108 42.6
Nitab4.5_0000340g0030 Nicotiana tabacum HOM05D003418 ORTHO05D004105 2.2e-09 66.2 115 38.3
THA.LOC104807144 Tarenaya hassleriana HOM05D003418 ORTHO05D004105 2.2e-09 66.2 118 39.8
THA.LOC104809188 Tarenaya hassleriana HOM05D003418 ORTHO05D004105 2.2e-09 66.2 118 39.8
THA.LOC104822793 Tarenaya hassleriana HOM05D003418 ORTHO05D004105 2.2e-09 66.2 118 39.8
CARHR026860 Cardamine hirsuta HOM05D003418 ORTHO05D004105 2.9e-09 65.9 116 37.1
CsaV3_4G002780 Cucumis sativus L. HOM05D003418 ORTHO05D004105 2.9e-09 65.9 128 39.1
TWI36G1005 Tripterygium wilfordii HOM05D003418 ORTHO05D004105 2.9e-09 65.9 126 41.3
Manes.13G009900 Manihot esculenta HOM05D003418 ORTHO05D004105 3.7e-09 65.5 120 38.3
PSO017G5034 Papaver somniferum HOM05D003418 ORTHO05D004105 3.7e-09 65.5 121 45.5
PSO017G5305 Papaver somniferum HOM05D003418 ORTHO05D004105 3.7e-09 65.5 111 41.4
Psat5g098080 Pisum sativum HOM05D003418 ORTHO05D004105 3.7e-09 65.5 108 40.7
SGA_v2.0_scaffold253G45188 Striga asiatica HOM05D003418 ORTHO05D004105 4.9e-09 65.1 112 42.0
Duzib248G1492 Durio zibethinus HOM05D003418 ORTHO05D004105 6.4e-09 64.7 126 38.9
Psat7g077520 Pisum sativum HOM05D003418 ORTHO05D004105 6.4e-09 64.7 125 35.2
MELO3C017764.2 Cucumis melo HOM05D003418 ORTHO05D004105 8.3e-09 64.3 124 38.7
Lalb_Chr23g0278191 Lupinus albus HOM05D003418 ORTHO05D004105 8.3e-09 64.3 137 35.8
PSO478G5262 Papaver somniferum HOM05D003418 ORTHO05D004105 8.3e-09 64.3 111 40.5
SGA_v2.0_scaffold87G27173 Striga asiatica HOM05D003418 ORTHO05D004105 8.3e-09 64.3 118 37.3
unitig_22.g6403 Utricularia gibba HOM05D003418 ORTHO05D003127 8.3e-09 64.3 122 36.1
BraA08t34595Z Brassica rapa HOM05D003418 ORTHO05D004105 1.1e-08 63.9 112 36.6
Hma1.2p1_0275F.1_g110610 Hydrangea macrophylla HOM05D003418 ORTHO05D004105 1.1e-08 63.9 124 41.1
Nitab4.5_0000067g0190 Nicotiana tabacum HOM05D003418 ORTHO05D004105 1.1e-08 63.9 115 40.0
A08p26430 Brassica napus HOM05D003418 ORTHO05D004105 1.4e-08 63.5 112 36.6
C03p73650 Brassica napus HOM05D003418 ORTHO05D004105 1.4e-08 63.5 112 35.7
BolC3t19656H Brassica oleracea HOM05D003418 ORTHO05D004105 1.4e-08 63.5 112 36.6
ClCG07G015190 Citrullus lanatus HOM05D003418 ORTHO05D004105 1.4e-08 63.5 129 39.5
Gohir.A12G149400 Gossypium hirsutum HOM05D003418 ORTHO05D004105 1.4e-08 63.5 126 38.1
Gohir.D12G153300 Gossypium hirsutum HOM05D003418 ORTHO05D004105 1.4e-08 63.5 126 36.5
Gorai.008G165800 Gossypium raimondii HOM05D003418 ORTHO05D004105 1.4e-08 63.5 126 38.1
Thecc.04G039200 Theobroma cacao HOM05D003418 ORTHO05D004105 1.4e-08 63.5 127 46.5
Cpa.g.sc43.80 Carica papaya HOM05D003418 ORTHO05D004105 1.9e-08 63.2 115 38.3
Glyma.18G004900 Glycine max HOM05D003418 ORTHO05D004105 1.9e-08 63.2 108 40.7
Hma1.2p1_1057F.1_g252730 Hydrangea macrophylla HOM05D003418 ORTHO05D004105 1.9e-08 63.2 57 56.1
Medtr3g084990 Medicago truncatula HOM05D003418 ORTHO05D004105 1.9e-08 63.2 110 37.3
PSO478G1430 Papaver somniferum HOM05D003418 ORTHO05D004105 1.9e-08 63.2 121 45.5
Atru.chr11.2346 Acer truncatum HOM05D003418 ORTHO05D004105 2.4e-08 62.8 120 45.8
DCAR_024672 Daucus carota HOM05D003418 ORTHO05D004105 2.4e-08 62.8 116 38.8
TPR.G17100 Trifolium pratense HOM05D003418 ORTHO05D004105 2.4e-08 62.8 126 38.9
Lj4g0014081 Lotus japonicus HOM05D003418 ORTHO05D004105 3.2e-08 62.4 132 35.6
THA.LOC104807496 Tarenaya hassleriana HOM05D003418 ORTHO05D004105 3.2e-08 62.4 130 39.2
Oeu056671.1 Olea europaea HOM05D003418 ORTHO05D004105 4.1e-08 62.0 124 36.3
Phvul.001G263300 Phaseolus vulgaris HOM05D003418 ORTHO05D004105 4.1e-08 62.0 108 37.0
Potri.003G170300 Populus trichocarpa HOM05D003418 ORTHO05D004105 4.1e-08 62.0 136 36.8
PGR119G0689 Punica granatum HOM05D003418 ORTHO05D004105 4.1e-08 62.0 126 40.5
BcaC05g26544 Brassica carinata HOM05D003418 ORTHO05D004105 5.4e-08 61.6 112 34.8
Thhalv10009048m.g Eutrema salsugineum HOM05D003418 ORTHO05D004105 5.4e-08 61.6 117 35.9
Glyma.05G148600 Glycine max HOM05D003418 ORTHO05D004105 5.4e-08 61.6 120 39.2
Nitab4.5_0005872g0010 Nicotiana tabacum HOM05D003418 ORTHO05D004105 5.4e-08 61.6 115 36.5
PGSC0003DMG400013209 Solanum tuberosum HOM05D003418 ORTHO05D004105 5.4e-08 61.6 133 36.1
arahy.Tifrunner.gnm1.ann1.V484X6 Arachis hypogaea HOM05D003418 ORTHO05D004105 7.1e-08 61.2 116 42.2
BcaB03g14004 Brassica carinata HOM05D003418 ORTHO05D004105 7.1e-08 61.2 126 37.3
Oeu004464.1 Olea europaea HOM05D003418 ORTHO05D004105 7.1e-08 61.2 133 36.8
Oeu049146.3 Olea europaea HOM05D003418 ORTHO05D004105 7.1e-08 61.2 122 35.2
SalBow7G0626 Salvia bowleyana HOM05D003418 ORTHO05D004105 7.1e-08 61.2 123 36.6
Manes.12G009300 Manihot esculenta HOM05D003418 ORTHO05D004105 9.2e-08 60.8 118 36.4
Sed0008687 Sechium edule HOM05D003418 ORTHO05D004105 9.2e-08 60.8 117 38.5
Sc11g0000380 Simmondsia chinensis HOM05D003418 ORTHO05D004105 9.2e-08 60.8 130 36.2
TPR.G17778 Trifolium pratense HOM05D003418 ORTHO05D004105 1.2e-07 60.5 120 37.5
unitig_8.g3133 Utricularia gibba HOM05D003418 ORTHO05D004105 1.2e-07 60.5 125 34.4
VMungo0251G0083 Vigna mungo HOM05D003418 ORTHO05D004105 1.2e-07 60.5 120 37.5
Actinidia08059 Actinidia chinensis HOM05D003418 ORTHO05D004105 1.6e-07 60.1 118 46.6
SalBow4G1936 Salvia bowleyana HOM05D003418 ORTHO05D004105 1.6e-07 60.1 110 38.2
Sed0009671 Sechium edule HOM05D003418 ORTHO05D004105 1.6e-07 60.1 131 34.4
MSTRG.8015 Avicennia marina HOM05D003418 ORTHO05D004105 2.1e-07 59.7 126 37.3
BcaB03g12071 Brassica carinata HOM05D003418 ORTHO05D004105 2.1e-07 59.7 118 38.1
Nitab4.5_0012747g0020 Nicotiana tabacum HOM05D003418 ORTHO05D004105 2.1e-07 59.7 101 40.6
Potri.001G058100 Populus trichocarpa HOM05D003418 ORTHO05D004105 2.1e-07 59.7 129 37.2
SalBow2G0507 Salvia bowleyana HOM05D003418 ORTHO05D004105 2.1e-07 59.7 119 34.5
CAN.G7.14 Capsicum annuum HOM05D003418 ORTHO05D004105 2.7e-07 59.3 114 37.7
Ca_18018_v3 Cicer arietinum L. HOM05D003418 ORTHO05D004105 2.7e-07 59.3 120 35.0
Phvul.L003346 Phaseolus vulgaris HOM05D003418 ORTHO05D004105 2.7e-07 59.3 114 38.6
Gorai.005G165100 Gossypium raimondii HOM05D003418 ORTHO05D004105 3.5e-07 58.9 126 39.7
arahy.Tifrunner.gnm1.ann1.R9UC9A Arachis hypogaea HOM05D003418 ORTHO05D004105 4.6e-07 58.5 116 40.5
BolC7t42298H Brassica oleracea HOM05D003418 ORTHO05D004105 4.6e-07 58.5 119 35.3
BraA07t28984Z Brassica rapa HOM05D003418 ORTHO05D004105 4.6e-07 58.5 119 36.1
Eucgr.H04620 Eucalyptus grandis HOM05D003418 ORTHO05D004105 4.6e-07 58.5 126 46.8
Gohir.A03G125000 Gossypium hirsutum HOM05D003418 ORTHO05D004105 4.6e-07 58.5 126 38.1
CDE02G2290 Ceratophyllum demersum HOM05D003418 ORTHO05D004105 6.0e-07 58.2 126 34.1
Sed0026789 Sechium edule HOM05D003418 ORTHO05D004105 6.0e-07 58.2 109 36.7
Gohir.A01G154140 Gossypium hirsutum HOM05D003418 ORTHO05D004105 7.8e-07 57.8 125 32.0
Gorai.002G181900 Gossypium raimondii HOM05D003418 ORTHO05D004105 7.8e-07 57.8 125 32.0
Lsat_1_v5_gn_2_93281 Lactuca sativa HOM05D003418 ORTHO05D004105 7.8e-07 57.8 123 40.7
PGR102G1973 Punica granatum HOM05D003418 ORTHO05D004105 7.8e-07 57.8 123 39.0
Rhsim12G0093300 Rhododendron simsii HOM05D003418 ORTHO05D004105 7.8e-07 57.8 130 37.7
Gohir.D01G146200 Gossypium hirsutum HOM05D003418 ORTHO05D004105 1.0e-06 57.4 125 32.0
Lalb_Chr07g0187041 Lupinus albus HOM05D003418 ORTHO05D004105 1.0e-06 57.4 113 34.5
SalBow4G0150 Salvia bowleyana HOM05D003418 ORTHO05D004105 1.0e-06 57.4 110 37.3
Sopen04g016940 Solanum pennellii HOM05D003418 ORTHO05D004105 1.0e-06 57.4 60 53.3
unitig_749.g13308 Utricularia gibba HOM05D003418 ORTHO05D004105 1.0e-06 57.4 120 34.2
HPP92_025259 Vanilla planifolia HOM05D003418 ORTHO05D004105 1.0e-06 57.4 127 33.1
Actinidia09637 Actinidia chinensis HOM05D003418 ORTHO05D004105 1.3e-06 57.0 63 55.6
C05p25990 Brassica napus HOM05D003418 ORTHO05D004105 1.3e-06 57.0 112 34.8
CDE06G2031 Ceratophyllum demersum HOM05D003325 ORTHO05D003852 1.3e-06 57.0 138 32.6
SGA_v2.0_scaffold391G50621 Striga asiatica HOM05D003418 ORTHO05D004105 1.3e-06 57.0 125 36.0
ATR0561G224 Amborella trichopoda HOM05D003418 ORTHO05D004105 1.7e-06 56.6 123 35.8
A07p11990 Brassica napus HOM05D003418 ORTHO05D004105 1.7e-06 56.6 119 35.3
Gohir.D02G147400 Gossypium hirsutum HOM05D003418 ORTHO05D004105 1.7e-06 56.6 120 37.5
C07p17920 Brassica napus HOM05D003418 ORTHO05D004105 2.3e-06 56.2 119 34.5
Migut.K00956 Erythranthe guttata HOM05D003418 ORTHO05D004105 2.3e-06 56.2 122 34.4
SalBow8G1362 Salvia bowleyana HOM05D003418 ORTHO05D004105 2.3e-06 56.2 116 33.6
HanXRQChr07g0198161 Helianthus annuus HOM05D003418 ORTHO05D004105 3.0e-06 55.8 120 45.0
Sabra01G0041900 Salix brachista HOM05D003418 ORTHO05D004105 3.0e-06 55.8 62 50.0
Ah.03g136010 Amaranthus hybridus HOM05D003418 ORTHO05D004105 5.1e-06 55.1 96 41.7
Aqoxy5G03322 Aquilegia oxysepala HOM05D003418 ORTHO05D004105 5.1e-06 55.1 86 46.5
Medtr8g097040 Medicago truncatula HOM05D003418 ORTHO05D004105 6.6e-06 54.7 64 53.1
Peaxi162Scf00518g00025 Petunia axillaris HOM05D003418 ORTHO05D004105 6.6e-06 54.7 128 42.2
Hund25475 Selenicereus undatus HOM05D003418 ORTHO05D004105 6.6e-06 54.7 106 40.6
Cpa.g.sc171.2 Carica papaya HOM05D003418 ORTHO05D004105 8.6e-06 54.3 122 37.7


User provided reference genes

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