Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.XF8PT2 Arachis hypogaea HOM05D000056 ORTHO05D010126 1.4e-90 336.3 165 100.0
arahy.Tifrunner.gnm1.ann1.UDT38R Arachis hypogaea HOM05D000056 ORTHO05D010126 4.4e-89 331.3 164 97.6
arahy.Tifrunner.gnm1.ann1.Y78IXY Arachis hypogaea HOM05D000056 ORTHO05D010126 1.1e-87 326.6 164 97.6
arahy.Tifrunner.gnm1.ann1.A9SYPB Arachis hypogaea HOM05D000056 ORTHO05D010126 8.9e-50 200.7 162 63.6
arahy.Tifrunner.gnm1.ann1.SBB7A0 Arachis hypogaea HOM05D000056 ORTHO05D010126 1.9e-47 193.0 162 64.2
Medtr7g067970 Medicago truncatula HOM05D000056 ORTHO05D010126 8.4e-24 114.4 124 48.4
TPR.G8136 Trifolium pratense HOM05D000056 ORTHO05D010126 4.2e-23 112.1 169 39.6
Phvul.010G002700 Phaseolus vulgaris HOM05D000056 ORTHO05D010126 5.4e-23 111.7 172 40.1
TPR.G8142 Trifolium pratense HOM05D000056 ORTHO05D010126 7.1e-23 111.3 178 38.8
Medtr7g067940 Medicago truncatula HOM05D000056 ORTHO05D010126 9.3e-23 110.9 179 40.8
Glyma.01G115600 Glycine max HOM05D000056 ORTHO05D010126 6.0e-22 108.2 157 40.8
Medtr7g068070 Medicago truncatula HOM05D000056 ORTHO05D010126 6.0e-22 108.2 211 34.6
arahy.Tifrunner.gnm1.ann1.DM2C02 Arachis hypogaea HOM05D000056 ORTHO05D010126 3.0e-21 105.9 199 38.7
Medtr7g068160 Medicago truncatula HOM05D000056 ORTHO05D010126 5.1e-21 105.1 169 40.2
VMungo0331G1171 Vigna mungo HOM05D000056 ORTHO05D010126 8.7e-21 104.4 170 38.2
Medtr7g067880 Medicago truncatula HOM05D000056 ORTHO05D010126 1.9e-20 103.2 170 37.6
Psat3g129960 Pisum sativum HOM05D000056 ORTHO05D010126 5.6e-20 101.7 166 38.0
arahy.Tifrunner.gnm1.ann1.5BS7U5 Arachis hypogaea HOM05D000056 ORTHO05D010126 1.6e-19 100.1 117 47.0
Medtr3g466740 Medicago truncatula HOM05D000056 ORTHO05D010126 2.8e-19 99.4 145 39.3
TPR.G40199 Trifolium pratense HOM05D000056 ORTHO05D010126 3.8e-16 89.0 145 37.9
Medtr7g067750 Medicago truncatula HOM05D000056 ORTHO05D010126 6.4e-16 88.2 171 32.7
Glyma.03G061200 Glycine max HOM05D000056 ORTHO05D010126 1.4e-15 87.0 168 33.3
TPR.G40114 Trifolium pratense HOM05D000056 ORTHO05D010126 2.4e-15 86.3 148 36.5
Medtr0067s0010 Medicago truncatula HOM05D000056 ORTHO05D010126 3.2e-15 85.9 145 36.6
Lalb_Chr03g0043121 Lupinus albus HOM05D000056 ORTHO05D010126 7.1e-15 84.7 177 35.0
VMungo1383G0202 Vigna mungo HOM05D000056 ORTHO05D010126 9.3e-15 84.3 175 36.0
Glyma.07G147200 Glycine max HOM05D000056 ORTHO05D010126 3.5e-14 82.4 181 37.0
Glyma.01G115700 Glycine max HOM05D000056 ORTHO05D010126 7.9e-14 81.3 141 41.8
Phvul.008G106100 Phaseolus vulgaris HOM05D000056 ORTHO05D010126 7.9e-14 81.3 175 36.0
Psat5g149520 Pisum sativum HOM05D000056 ORTHO05D010126 5.1e-13 78.6 145 33.8
Medtr7g067660 Medicago truncatula HOM05D000056 ORTHO05D010126 6.7e-13 78.2 114 40.4
Lj1g0001110 Lotus japonicus HOM05D006694 ORTHO05D010126 8.7e-13 77.8 157 32.5
Glyma.17G238300 Glycine max HOM05D000056 ORTHO05D010126 5.6e-12 75.1 118 42.4
Glyma.01G114600 Glycine max HOM05D000056 ORTHO05D010126 1.3e-11 73.9 144 34.0
TPR.G1958 Trifolium pratense HOM05D000056 ORTHO05D010126 1.3e-11 73.9 101 39.6
Phvul.003G113700 Phaseolus vulgaris HOM05D000056 ORTHO05D000019 1.4e-10 70.5 133 35.3
Prupe.6G273800 Prunus persica HOM05D000056 ORTHO05D000019 1.4e-10 70.5 150 31.3
VMungo1215G2725 Vigna mungo HOM05D000056 ORTHO05D000019 1.4e-10 70.5 163 31.9
GSVIVG01033984001 Vitis vinifera HOM05D000056 ORTHO05D000019 6.9e-10 68.2 153 32.0
Dinv04444 Davidia involucrata HOM05D000056 ORTHO05D000019 2.0e-09 66.6 156 31.4
Medtr7g067990 Medicago truncatula HOM05D000056 ORTHO05D010126 2.0e-09 66.6 82 46.3
DCAR_015443 Daucus carota HOM05D000056 ORTHO05D000019 3.4e-09 65.9 105 36.2
Medtr7g067600 Medicago truncatula HOM05D000056 ORTHO05D010126 3.4e-09 65.9 187 28.9
FAN07G0111 Fragaria x ananassa HOM05D000056 ORTHO05D000019 5.8e-09 65.1 161 28.0
Nn8g41212 Nelumbo nucifera HOM05D000056 ORTHO05D000019 5.8e-09 65.1 117 35.0
QL05p011042 Quercus lobata HOM05D000056 ORTHO05D000019 5.8e-09 65.1 151 28.5
QL02p100699 Quercus lobata HOM05D000056 ORTHO05D000019 7.6e-09 64.7 158 29.1
Aa31LG4G16090 Aethionema arabicum HOM05D000056 ORTHO05D000019 1.0e-08 64.3 170 30.6
Lj8P670T5 Lonicera japonica HOM05D000056 ORTHO05D000019 1.0e-08 64.3 153 30.1
Potri.013G146300 Populus trichocarpa HOM05D000056 ORTHO05D000019 1.0e-08 64.3 113 37.2
VMungo0331G0587 Vigna mungo HOM05D000056 ORTHO05D010126 1.3e-08 63.9 153 34.6
Duzib213G0238 Durio zibethinus HOM05D000056 ORTHO05D019100 1.7e-08 63.5 143 32.9
QL05p011105 Quercus lobata HOM05D000056 ORTHO05D000019 1.7e-08 63.5 158 27.8
vmacro08055 Vaccinium macrocarpon HOM05D000056 ORTHO05D000019 1.7e-08 63.5 136 32.4
Aqoxy3G01919 Aquilegia oxysepala HOM05D000056 ORTHO05D000019 2.9e-08 62.8 161 29.2
Prupe.6G273400 Prunus persica HOM05D000056 ORTHO05D000019 3.8e-08 62.4 147 31.3
Prupe.6G274300 Prunus persica HOM05D000056 ORTHO05D000019 3.8e-08 62.4 145 30.3
Dinv05104 Davidia involucrata HOM05D000056 ORTHO05D000019 4.9e-08 62.0 159 27.7
Duzib052G0708 Durio zibethinus HOM05D000056 ORTHO05D000019 4.9e-08 62.0 170 34.7
Dinv01690 Davidia involucrata HOM05D000056 ORTHO05D000019 6.5e-08 61.6 175 26.9
Phvul.010G002600 Phaseolus vulgaris HOM05D000056 ORTHO05D010126 6.5e-08 61.6 149 34.2
arahy.Tifrunner.gnm1.ann1.GDD7VZ Arachis hypogaea HOM05D000056 ORTHO05D010126 8.4e-08 61.2 119 37.0
Eucgr.A00374 Eucalyptus grandis HOM05D000056 ORTHO05D000019 8.4e-08 61.2 121 37.2
Prupe.6G274100 Prunus persica HOM05D000056 ORTHO05D000019 8.4e-08 61.2 103 36.9
QL10p050450 Quercus lobata HOM05D000056 ORTHO05D000019 8.4e-08 61.2 166 28.3
CiPaw.02G075300 Carya illinoinensis HOM05D000056 ORTHO05D000019 1.1e-07 60.8 120 33.3
FvH4_4g19590 Fragaria vesca HOM05D000056 ORTHO05D000019 1.1e-07 60.8 157 27.4
FAN12G4164 Fragaria x ananassa HOM05D000056 ORTHO05D000019 1.1e-07 60.8 157 27.4
Aa31LG4G16100 Aethionema arabicum HOM05D000056 ORTHO05D000019 1.4e-07 60.5 151 28.5
Ah.11g047730 Amaranthus hybridus HOM05D000056 ORTHO05D000019 1.4e-07 60.5 144 28.5
Eucgr.E04287 Eucalyptus grandis HOM05D000056 ORTHO05D000019 1.4e-07 60.5 126 31.7
QL02p103503 Quercus lobata HOM05D000056 ORTHO05D000019 1.4e-07 60.5 148 26.4
TAR371G0928 Trochodendron aralioides HOM05D000056 ORTHO05D000019 1.4e-07 60.5 111 33.3
Potri.010G144200 Populus trichocarpa HOM05D000056 ORTHO05D000019 1.9e-07 60.1 166 30.1
PGR031G2742 Punica granatum HOM05D000056 ORTHO05D000019 1.9e-07 60.1 159 29.6
Carub.0006s2030 Capsella rubella HOM05D000056 ORTHO05D000019 2.5e-07 59.7 155 29.7
Glyma.17G033000 Glycine max HOM05D000056 ORTHO05D000019 2.5e-07 59.7 123 32.5
Nn2g12685 Nelumbo nucifera HOM05D000056 ORTHO05D000019 2.5e-07 59.7 167 26.3
QL02p103531 Quercus lobata HOM05D000056 ORTHO05D000019 2.5e-07 59.7 148 27.0
Thecc.04G299500 Theobroma cacao HOM05D000056 ORTHO05D000019 2.5e-07 59.7 170 34.1
arahy.Tifrunner.gnm1.ann1.J2F2FY Arachis hypogaea HOM05D000056 ORTHO05D000019 3.2e-07 59.3 121 34.7
COL.COLO4_34627 Corchorus olitorius HOM05D000056 ORTHO05D000019 3.2e-07 59.3 156 33.3
MELO3C011244.2 Cucumis melo HOM05D000056 ORTHO05D000019 3.2e-07 59.3 143 27.3
Eucgr.E04294 Eucalyptus grandis HOM05D000056 ORTHO05D000019 3.2e-07 59.3 137 31.4
Glyma.07G240400 Glycine max HOM05D000056 ORTHO05D000019 3.2e-07 59.3 124 32.3
Nn8g40925 Nelumbo nucifera HOM05D000056 ORTHO05D000019 3.2e-07 59.3 130 32.3
PGR083G0619 Punica granatum HOM05D000056 ORTHO05D000019 3.2e-07 59.3 98 34.7
PGR128G0002 Punica granatum HOM05D000056 ORTHO05D000019 3.2e-07 59.3 98 34.7
arahy.Tifrunner.gnm1.ann1.5WJ68K Arachis hypogaea HOM05D000056 ORTHO05D000019 4.2e-07 58.9 121 34.7
CARHR190990 Cardamine hirsuta HOM05D000056 ORTHO05D000019 4.2e-07 58.9 148 30.4
FvH4_6g11790 Fragaria vesca HOM05D000056 ORTHO05D000019 4.2e-07 58.9 150 28.7
QL10p050344 Quercus lobata HOM05D000056 ORTHO05D000019 4.2e-07 58.9 126 30.2
RcHm_v2.0_Chr5g0017731 Rosa chinensis HOM05D000056 ORTHO05D000019 4.2e-07 58.9 147 29.3
Ca_20307_v3 Cicer arietinum L. HOM05D000056 ORTHO05D010126 5.5e-07 58.5 122 33.6
Eucgr.B03889 Eucalyptus grandis HOM05D000056 ORTHO05D000019 5.5e-07 58.5 157 30.6
Medtr7g068040 Medicago truncatula HOM05D000056 ORTHO05D010126 5.5e-07 58.5 116 33.6
Prupe.7G150000 Prunus persica HOM05D000056 ORTHO05D000019 5.5e-07 58.5 167 29.3
ECA232G2208 Erigeron canadensis HOM05D000056 ORTHO05D000019 7.1e-07 58.2 144 31.9
arahy.Tifrunner.gnm1.ann1.4PY23S Arachis hypogaea HOM05D000056 ORTHO05D010126 9.3e-07 57.8 129 34.1
ECA234G1568 Erigeron canadensis HOM05D000056 ORTHO05D000019 9.3e-07 57.8 137 30.7
MBI01_g18398_MAGBIO Magnolia biondii HOM05D000056 ORTHO05D000019 9.3e-07 57.8 121 28.9
RcHm_v2.0_Chr4g0424851 Rosa chinensis HOM05D000056 ORTHO05D000019 9.3e-07 57.8 131 27.5
TAR371G0852 Trochodendron aralioides HOM05D000056 ORTHO05D000019 9.3e-07 57.8 112 34.8
TAR371G1273 Trochodendron aralioides HOM05D000056 ORTHO05D000019 9.3e-07 57.8 113 31.0
Atru.chr5.2457 Acer truncatum HOM05D000056 ORTHO05D000019 1.2e-06 57.4 131 33.6
Eucgr.E04259 Eucalyptus grandis HOM05D000056 ORTHO05D000019 1.2e-06 57.4 126 31.0
Eucgr.L01703 Eucalyptus grandis HOM05D000056 ORTHO05D000019 1.2e-06 57.4 137 30.7
Manes.15G004900 Manihot esculenta HOM05D000056 ORTHO05D000019 1.2e-06 57.4 131 32.8
QL10p050368 Quercus lobata HOM05D000056 ORTHO05D000019 1.2e-06 57.4 166 26.5
RcHm_v2.0_Chr3g0462721 Rosa chinensis HOM05D000056 ORTHO05D000019 1.2e-06 57.4 113 31.9
MSTRG.23720 Avicennia marina HOM05D000056 ORTHO05D000019 1.6e-06 57.0 105 35.2
Cc03_g06710 Coffea canephora HOM05D000056 ORTHO05D000019 1.6e-06 57.0 135 33.3
Thhalv10027328m.g Eutrema salsugineum HOM05D000056 ORTHO05D000019 1.6e-06 57.0 136 29.4
Oeu012685.1 Olea europaea HOM05D000056 ORTHO05D000019 1.6e-06 57.0 101 27.7
Phvul.010G003300 Phaseolus vulgaris HOM05D000056 ORTHO05D010126 1.6e-06 57.0 102 33.3
VMungo0331G2021 Vigna mungo HOM05D000056 ORTHO05D010126 1.6e-06 57.0 102 33.3
Aqoxy4G00439 Aquilegia oxysepala HOM05D000056 ORTHO05D000019 2.1e-06 56.6 156 28.2
MELO3C011248.2 Cucumis melo HOM05D000056 ORTHO05D000019 2.1e-06 56.6 98 34.7
DCAR_015428 Daucus carota HOM05D000056 ORTHO05D000019 2.1e-06 56.6 98 36.7
Glyma.01G114400 Glycine max HOM05D000056 ORTHO05D010126 2.1e-06 56.6 104 33.7
Lj8C686T4 Lonicera japonica HOM05D000056 ORTHO05D000019 2.1e-06 56.6 121 29.8
Psat7g246280 Pisum sativum HOM05D000056 ORTHO05D010126 2.1e-06 56.6 156 29.5
QL06p011911 Quercus lobata HOM05D000056 ORTHO05D000019 2.1e-06 56.6 124 31.5
QL10p050388 Quercus lobata HOM05D000056 ORTHO05D000019 2.1e-06 56.6 166 28.3
QL10p050406 Quercus lobata HOM05D000056 ORTHO05D000019 2.1e-06 56.6 166 28.3
RcHm_v2.0_Chr6g0298271 Rosa chinensis HOM05D000056 ORTHO05D000019 2.1e-06 56.6 119 31.9
FAN12G3062 Fragaria x ananassa HOM05D000056 ORTHO05D000019 2.7e-06 56.2 163 30.1
Prupe.6G273200 Prunus persica HOM05D000056 ORTHO05D000019 2.7e-06 56.2 119 32.8
QL02p103496 Quercus lobata HOM05D000056 ORTHO05D000019 2.7e-06 56.2 159 26.4
QL10p050475 Quercus lobata HOM05D000056 ORTHO05D000019 2.7e-06 56.2 163 27.6
TWI56G0256 Tripterygium wilfordii HOM05D000056 ORTHO05D000019 2.7e-06 56.2 102 31.4
BcaC04g19586 Brassica carinata HOM05D000056 ORTHO05D000019 3.5e-06 55.8 120 31.7
AUR62039289 Chenopodium quinoa HOM05D000056 ORTHO05D000019 3.5e-06 55.8 129 29.5
Haze_10623 Corylus avellana HOM05D000056 ORTHO05D000019 3.5e-06 55.8 151 27.8
QL10p050314 Quercus lobata HOM05D000056 ORTHO05D000019 3.5e-06 55.8 163 27.6
SEGI_36753 Sequoiadendron giganteum HOM05D000991 ORTHO05D000848 3.5e-06 55.8 158 27.2
BcaC01g06577 Brassica carinata HOM05D000056 ORTHO05D000019 4.6e-06 55.5 147 30.6
C03p12400 Brassica napus HOM05D000056 ORTHO05D000019 4.6e-06 55.5 147 30.6
BolC3t13713H Brassica oleracea HOM05D000056 ORTHO05D000019 4.6e-06 55.5 147 30.6
AUR62018888 Chenopodium quinoa HOM05D000056 ORTHO05D000019 4.6e-06 55.5 139 29.5
AUR62028135 Chenopodium quinoa HOM05D000056 ORTHO05D000019 4.6e-06 55.5 139 29.5
MELO3C017852.2 Cucumis melo HOM05D000991 ORTHO05D000848 4.6e-06 55.5 141 34.8
Dinv14504 Davidia involucrata HOM05D000056 ORTHO05D000019 4.6e-06 55.5 100 29.0
ECA232G2060 Erigeron canadensis HOM05D000056 ORTHO05D000019 4.6e-06 55.5 101 34.7
Glyma.03G063400 Glycine max HOM05D000056 ORTHO05D010126 4.6e-06 55.5 106 34.9
Lsat_1_v5_gn_8_106060 Lactuca sativa HOM05D000056 ORTHO05D000019 4.6e-06 55.5 127 27.6
Lj8C681T2 Lonicera japonica HOM05D000056 ORTHO05D000019 4.6e-06 55.5 121 28.9
Lj8C688T2 Lonicera japonica HOM05D000056 ORTHO05D000019 4.6e-06 55.5 121 28.9
Atru.chr1.687 Acer truncatum HOM05D000056 ORTHO05D000019 6.0e-06 55.1 145 30.3
Ciclev10004991m.g Citrus clementina HOM05D000056 ORTHO05D000019 6.0e-06 55.1 122 30.3
CsaV3_7G007350 Cucumis sativus L. HOM05D000056 ORTHO05D000019 6.0e-06 55.1 125 26.4
Dinv02370 Davidia involucrata HOM05D000056 ORTHO05D000019 6.0e-06 55.1 137 30.7
Eucgr.E04277 Eucalyptus grandis HOM05D000056 ORTHO05D000019 6.0e-06 55.1 126 30.2
FAN14G4597 Fragaria x ananassa HOM05D000056 ORTHO05D000019 6.0e-06 55.1 155 28.4
Medtr7g067300 Medicago truncatula HOM05D000056 ORTHO05D010126 6.0e-06 55.1 89 39.3
BraA10t43909Z Brassica rapa HOM05D000056 ORTHO05D000019 7.9e-06 54.7 120 30.8
CANSAT78G0493 Cannabis sativa HOM05D000056 ORTHO05D000019 7.9e-06 54.7 141 27.7
ECA236G3935 Erigeron canadensis HOM05D000056 ORTHO05D000019 7.9e-06 54.7 137 27.7
Lsat_1_v5_gn_7_28761 Lactuca sativa HOM05D000056 ORTHO05D000019 7.9e-06 54.7 161 27.3
Lj8C677T3 Lonicera japonica HOM05D000056 ORTHO05D000019 7.9e-06 54.7 142 26.1
Lj8P682T13 Lonicera japonica HOM05D000056 ORTHO05D000019 7.9e-06 54.7 120 29.2
Medtr1g040690 Medicago truncatula HOM05D000056 ORTHO05D010126 7.9e-06 54.7 105 32.4
TAR731G0003 Trochodendron aralioides HOM05D000056 ORTHO05D000019 7.9e-06 54.7 149 22.1


User provided reference genes

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