Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.X7XTN1 Arachis hypogaea HOM05D000729 ORTHO05D023744 4.4e-50 201.1 106 100.0
arahy.Tifrunner.gnm1.ann1.VX11DM Arachis hypogaea HOM05D000729 ORTHO05D001063 7.5e-26 120.6 95 73.7
arahy.Tifrunner.gnm1.ann1.KE24QQ Arachis hypogaea HOM05D000729 ORTHO05D001063 1.1e-24 116.7 95 70.5
EL10As12g24040 Beta vulgaris HOM05D000729 ORTHO05D001063 1.3e-22 109.8 91 69.2
arahy.Tifrunner.gnm1.ann1.55GAEG Arachis hypogaea HOM05D000729 ORTHO05D023744 9.5e-21 103.6 86 69.8
SGA_v2.0_scaffold95G28824 Striga asiatica HOM05D000729 ORTHO05D001063 4.0e-19 98.2 91 68.1
arahy.Tifrunner.gnm1.ann1.D45B89 Arachis hypogaea HOM05D000729 ORTHO05D001063 1.5e-18 96.3 95 62.1
Gohir.A09G101260 Gossypium hirsutum HOM05D000729 ORTHO05D023744 5.6e-13 77.8 61 72.1
EL10As15g24105 Beta vulgaris HOM05D000729 ORTHO05D002596 2.9e-09 65.5 92 47.8
Solyc10g061887.1 Solanum lycopersicum HOM05D000729 ORTHO05D001063 3.8e-09 65.1 54 74.1
Nitab4.5_0006114g0050 Nicotiana tabacum HOM05D000729 ORTHO05D023744 1.1e-08 63.5 55 72.7
Sc03g0010040 Simmondsia chinensis HOM05D000729 ORTHO05D001063 1.4e-08 63.2 93 53.8
BolSC29t60494H Brassica oleracea HOM05D000729 ORTHO05D001063 3.0e-06 55.5 42 73.8
BolSC46t60971H Brassica oleracea HOM05D000729 ORTHO05D001063 3.0e-06 55.5 42 73.8
BolSC47t61070H Brassica oleracea HOM05D000729 ORTHO05D001063 3.0e-06 55.5 42 73.8
BraSC103t45436Z Brassica rapa HOM05D000729 ORTHO05D001063 3.0e-06 55.5 42 73.8
BraSC25t45897Z Brassica rapa HOM05D000729 ORTHO05D001063 3.0e-06 55.5 42 73.8
BraSC59t46538Z Brassica rapa HOM05D000729 ORTHO05D001063 3.0e-06 55.5 42 73.8
HanXRQChr00c0585g0576201 Helianthus annuus HOM05D000729 ORTHO05D001063 5.1e-06 54.7 53 69.8
BolSC29t60627H Brassica oleracea HOM05D000729 ORTHO05D001063 6.6e-06 54.3 60 61.7
HanXRQChr00c0634g0576581 Helianthus annuus HOM05D000729 ORTHO05D001063 8.6e-06 53.9 55 65.5
HanXRQChr07g0194901 Helianthus annuus HOM05D000729 ORTHO05D001063 8.6e-06 53.9 55 65.5


User provided reference genes

Program Settings