Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 1.4e-113 413.7 338 100.0
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 1.3e-50 204.5 282 83.7
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 1.3e-50 204.5 282 83.7
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 3.8e-47 193.0 282 71.3
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 2.0e-43 180.6 275 76.4
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 2.1e-37 160.6 216 78.7
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 1.4e-36 157.9 275 64.0
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 1.2e-27 128.3 301 56.1
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 7.5e-27 125.6 287 57.1
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 1.6e-24 117.9 285 56.1
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 2.9e-23 113.6 287 55.1
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 1.5e-22 111.3 297 55.6
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 2.3e-20 104.0 287 54.7
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 8.8e-20 102.1 233 61.8
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 3.4e-19 100.1 237 59.9
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 5.7e-19 99.4 233 60.9
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 9.8e-19 98.6 299 51.8
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 1.3e-18 98.2 233 60.1
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 6.3e-18 95.9 285 52.6
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 1.0e-15 88.6 223 59.6
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 1.5e-14 84.7 114 45.6
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 1.9e-14 84.3 229 58.5
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 2.5e-14 84.0 233 58.4
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 2.5e-14 84.0 111 45.9
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 5.5e-14 82.8 214 60.7
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 5.5e-14 82.8 217 60.8
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 9.5e-14 82.0 222 58.6
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 1.2e-13 81.6 111 45.0
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 1.6e-13 81.3 105 45.7
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 1.6e-13 81.3 111 45.0
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 2.1e-13 80.9 229 59.0
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 2.1e-13 80.9 217 59.4
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 8.0e-13 79.0 101 46.5
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 8.0e-13 79.0 162 72.8
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 1.0e-12 78.6 214 59.3
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 1.0e-12 78.6 231 56.3
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.4e-12 78.2 229 56.8
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 1.8e-12 77.8 228 57.9
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 2.3e-12 77.4 205 59.5
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 2.3e-12 77.4 232 57.8
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 3.0e-12 77.0 203 60.6
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 3.0e-12 77.0 100 48.0
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 3.0e-12 77.0 218 58.7
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 4.0e-12 76.6 220 58.6
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 4.0e-12 76.6 228 55.7
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 4.0e-12 76.6 228 55.7
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 4.0e-12 76.6 237 56.1
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 5.2e-12 76.3 212 59.4
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 6.8e-12 75.9 214 60.3
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 8.9e-12 75.5 112 43.8
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 1.2e-11 75.1 224 56.7
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 1.2e-11 75.1 224 56.7
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 1.2e-11 75.1 253 53.0
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 1.2e-11 75.1 211 59.2
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 1.2e-11 75.1 225 56.9
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 1.5e-11 74.7 211 59.7
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 1.5e-11 74.7 215 60.0
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 2.0e-11 74.3 243 55.6
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 2.0e-11 74.3 107 43.0
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 2.6e-11 73.9 102 42.2
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 3.4e-11 73.6 229 54.6
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 4.4e-11 73.2 102 44.1
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 7.5e-11 72.4 110 43.6
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 7.5e-11 72.4 112 41.1
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 9.8e-11 72.0 217 58.1
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 9.8e-11 72.0 227 56.4
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 1.3e-10 71.6 99 44.4
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 1.7e-10 71.2 226 57.5
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 2.2e-10 70.9 210 59.0
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 2.2e-10 70.9 99 44.4
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 2.8e-10 70.5 217 59.4
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 2.8e-10 70.5 213 58.2
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 3.7e-10 70.1 211 60.2
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 4.9e-10 69.7 223 57.8
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 4.9e-10 69.7 211 60.2
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 6.3e-10 69.3 223 57.8
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 6.3e-10 69.3 226 57.1
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 8.3e-10 68.9 222 56.3
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 8.3e-10 68.9 225 55.1
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 1.1e-09 68.6 225 56.4
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 1.4e-09 68.2 208 60.1
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 1.4e-09 68.2 223 54.7
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 1.8e-09 67.8 204 59.3
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 1.8e-09 67.8 301 48.5
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 5.4e-09 66.2 224 56.7
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 9.2e-09 65.5 113 39.8
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 9.2e-09 65.5 207 59.4
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 2.7e-08 63.9 100 40.0
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 4.5e-08 63.2 99 41.4
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 4.5e-08 63.2 221 55.7
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 5.9e-08 62.8 215 56.7
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 7.8e-08 62.4 214 56.1
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 7.8e-08 62.4 98 40.8
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 1.0e-07 62.0 211 56.9
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 1.3e-07 61.6 237 40.1
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 1.3e-07 61.6 97 41.2
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.7e-07 61.2 221 55.7
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 2.3e-07 60.8 34 82.4
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 6.6e-07 59.3 99 36.4
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 1.9e-06 57.8 101 39.6
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 2.5e-06 57.4 154 72.7
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 4.3e-06 56.6 214 56.5
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 9.5e-06 55.5 153 30.7


User provided reference genes

Program Settings