Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.X7GISI Arachis hypogaea HOM05D003347 ORTHO05D003821 1.9e-71 273.5 295 100.0
Phvul.009G151400 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 3.5e-20 103.2 156 78.8
Glyma.06G158900 Glycine max HOM05D003347 ORTHO05D003821 4.5e-20 102.8 160 62.5
TPR.G28695 Trifolium pratense HOM05D003347 ORTHO05D003821 4.2e-18 96.3 161 66.5
arahy.Tifrunner.gnm1.ann1.0YHR6E Arachis hypogaea HOM05D003347 ORTHO05D003821 4.7e-17 92.8 308 65.3
arahy.Tifrunner.gnm1.ann1.3X6E38 Arachis hypogaea HOM05D003347 ORTHO05D003821 4.7e-17 92.8 308 65.3
Lj1g0014274 Lotus japonicus HOM05D003347 ORTHO05D003821 6.1e-17 92.4 76 72.4
VMungo1309G3119 Vigna mungo HOM05D003347 ORTHO05D003821 6.1e-17 92.4 159 71.1
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 1.4e-16 91.3 176 54.5
Lalb_Chr11g0068781 Lupinus albus HOM05D003347 ORTHO05D003821 3.0e-16 90.1 154 76.0
arahy.Tifrunner.gnm1.ann1.AG1RTL Arachis hypogaea HOM05D003347 ORTHO05D003821 1.7e-14 84.3 106 63.2
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 4.8e-14 82.8 81 64.2
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 3.1e-13 80.1 158 46.8
Psat5g058160 Pisum sativum HOM05D003347 ORTHO05D003821 4.5e-12 76.3 73 61.6
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 4.5e-12 76.3 77 61.0
Cpa.g.sc37.62 Carica papaya HOM05D003347 ORTHO05D003821 1.7e-11 74.3 74 58.1
HPP92_009365 Vanilla planifolia HOM05D003347 ORTHO05D003821 2.9e-11 73.6 71 63.4
Atru.chr6.636 Acer truncatum HOM05D003347 ORTHO05D003821 5.0e-11 72.8 74 58.1
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 8.5e-11 72.0 76 55.3
TAR628G0882 Trochodendron aralioides HOM05D003347 ORTHO05D003821 1.9e-10 70.9 77 57.1
HanXRQChr03g0071751 Helianthus annuus HOM05D003347 ORTHO05D003821 5.5e-10 69.3 76 51.3
Lsat_1_v5_gn_9_118960 Lactuca sativa HOM05D003347 ORTHO05D003821 7.2e-10 68.9 77 54.5
EL10Ac4g09689 Beta vulgaris HOM05D003347 ORTHO05D003821 9.4e-10 68.6 122 44.3
Nn5g28237 Nelumbo nucifera HOM05D003347 ORTHO05D003821 9.4e-10 68.6 75 56.0
CDE08G0312 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 1.2e-09 68.2 155 52.9
COL.COLO4_12116 Corchorus olitorius HOM05D012218 ORTHO05D003821 1.2e-09 68.2 72 58.3
Sc03g0004210 Simmondsia chinensis HOM05D003347 ORTHO05D003821 1.2e-09 68.2 77 54.5
Sed0017913 Sechium edule HOM05D003347 ORTHO05D003821 2.7e-09 67.0 76 53.9
Cfa002207 Carpinus fangiana HOM05D003347 ORTHO05D003821 3.6e-09 66.6 68 58.8
Psat5g058080 Pisum sativum HOM05D003347 ORTHO05D003821 4.7e-09 66.2 72 54.2
Atru.chr4.1125 Acer truncatum HOM05D003347 ORTHO05D003821 6.1e-09 65.9 70 57.1
Oeu008894.1 Olea europaea HOM05D003347 ORTHO05D003821 6.1e-09 65.9 114 41.2
Oeu008895.1 Olea europaea HOM05D003347 ORTHO05D003821 6.1e-09 65.9 79 50.6
Glyma.04G206600 Glycine max HOM05D003347 ORTHO05D003821 8.0e-09 65.5 156 71.8
HanXRQChr01g0017031 Helianthus annuus HOM05D003347 ORTHO05D003821 8.0e-09 65.5 70 57.1
Oeu033124.1 Olea europaea HOM05D002729 ORTHO05D003163 8.0e-09 65.5 75 52.0
vmacro01761 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 8.0e-09 65.5 74 51.4
Zm00001eb113690 Zea mays HOM05D003347 ORTHO05D003821 8.0e-09 65.5 76 50.0
AUR62014268 Chenopodium quinoa HOM05D003347 ORTHO05D003821 1.4e-08 64.7 77 50.6
Lj9C306T9 Lonicera japonica HOM05D003347 ORTHO05D003821 2.3e-08 63.9 74 52.7
PSO063G2612 Papaver somniferum HOM05D003347 ORTHO05D003821 2.3e-08 63.9 77 53.2
Nitab4.5_0000496g0140 Nicotiana tabacum HOM05D003347 ORTHO05D003821 3.0e-08 63.5 77 57.1
Zm00001eb197610 Zea mays HOM05D003347 ORTHO05D003821 3.0e-08 63.5 76 51.3
AUR62042720 Chenopodium quinoa HOM05D003347 ORTHO05D003821 4.0e-08 63.2 77 49.4
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 6.8e-08 62.4 70 55.7
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 6.8e-08 62.4 70 55.7
CiPaw.03G114900 Carya illinoinensis HOM05D003347 ORTHO05D003821 6.8e-08 62.4 136 66.2
CDE06G2842 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 8.8e-08 62.0 76 48.7
MELO3C014381.2 Cucumis melo HOM05D003347 ORTHO05D003821 8.8e-08 62.0 73 49.3
unitig_60.g25508 Utricularia gibba HOM05D003347 ORTHO05D003821 2.0e-07 60.8 85 49.4
CDE06G2684 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 2.6e-07 60.5 76 47.4
CsaV3_6G037360 Cucumis sativus L. HOM05D003347 ORTHO05D003821 2.6e-07 60.5 73 47.9
TAR381G0729 Trochodendron aralioides HOM05D003347 ORTHO05D003821 2.6e-07 60.5 75 52.0
Ca_17010_v3 Cicer arietinum L. HOM05D003347 ORTHO05D003821 5.7e-07 59.3 152 65.8
MSTRG.23472 Avicennia marina HOM05D003347 ORTHO05D003821 7.5e-07 58.9 77 51.9
PGR102G0439 Punica granatum HOM05D003347 ORTHO05D003821 2.2e-06 57.4 77 51.9
Hund12985 Selenicereus undatus HOM05D003347 ORTHO05D003821 2.8e-06 57.0 70 50.0
TWI59G0889 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 2.8e-06 57.0 74 48.6
Potri.019G001900 Populus trichocarpa HOM05D003347 ORTHO05D003821 3.7e-06 56.6 65 56.9
Aqoxy6G00189 Aquilegia oxysepala HOM05D003347 ORTHO05D003821 6.3e-06 55.8 77 48.1
TWI14G1287 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 6.3e-06 55.8 72 44.4
Hma1.2p1_1197F.1_g266100 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 8.3e-06 55.5 68 51.5


User provided reference genes

Program Settings