Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 5.3e-65 250.8 117 100.0
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 1.2e-27 126.7 111 61.3
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 2.0e-27 125.9 123 59.3
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 9.8e-27 123.6 124 57.3
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 6.4e-26 120.9 116 61.2
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 3.2e-25 118.6 126 59.5
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 3.0e-23 112.1 122 56.6
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 5.2e-20 101.3 73 65.8
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 2.6e-19 99.0 82 61.0
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 5.4e-17 91.3 62 67.7
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 3.5e-16 88.6 113 46.0
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 5.1e-15 84.7 45 77.8
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 5.1e-15 84.7 45 77.8
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 5.1e-15 84.7 45 77.8
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 2.5e-14 82.4 45 75.6
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 1.2e-13 80.1 38 84.2
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 1.2e-13 80.1 80 48.8
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 1.2e-13 80.1 38 84.2
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 1.6e-13 79.7 39 84.6
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 1.6e-13 79.7 50 72.0
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 1.6e-13 79.7 50 72.0
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 2.1e-13 79.3 101 42.6
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 2.1e-13 79.3 105 41.0
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 2.8e-13 79.0 44 75.0
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 4.7e-13 78.2 89 46.1
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 1.1e-12 77.0 38 81.6
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 1.1e-12 77.0 38 81.6
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 1.1e-12 77.0 38 81.6
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 1.1e-12 77.0 97 47.4
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 1.8e-12 76.3 37 81.1
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 1.8e-12 76.3 62 59.7
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 1.8e-12 76.3 36 83.3
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 1.8e-12 76.3 44 70.5
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 1.8e-12 76.3 49 69.4
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 2.3e-12 75.9 36 80.6
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 2.3e-12 75.9 36 86.1
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 2.3e-12 75.9 47 72.3
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 2.3e-12 75.9 47 72.3
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 2.3e-12 75.9 46 76.1
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 3.1e-12 75.5 36 83.3
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 3.1e-12 75.5 49 71.4
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 3.1e-12 75.5 94 47.9
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 4.0e-12 75.1 77 51.9
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 4.0e-12 75.1 33 87.9
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 4.0e-12 75.1 35 82.9
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 5.2e-12 74.7 76 52.6
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 5.2e-12 74.7 36 80.6
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 5.2e-12 74.7 36 80.6
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 6.8e-12 74.3 34 85.3
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 6.8e-12 74.3 43 72.1
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 1.2e-11 73.6 38 78.9
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 1.2e-11 73.6 94 43.6
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 1.5e-11 73.2 98 44.9
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 1.5e-11 73.2 42 69.0
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 2.0e-11 72.8 35 80.0
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 2.6e-11 72.4 113 44.2
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 4.4e-11 71.6 39 71.8
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 4.4e-11 71.6 33 84.8
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 4.4e-11 71.6 41 70.7
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 5.8e-11 71.2 97 44.3
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 5.8e-11 71.2 110 40.0
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 7.5e-11 70.9 38 73.7
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 9.9e-11 70.5 99 43.4
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 1.3e-10 70.1 78 48.7
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 1.3e-10 70.1 40 70.0
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 1.3e-10 70.1 69 50.7
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 1.7e-10 69.7 94 45.7
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 1.7e-10 69.7 35 77.1
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 2.2e-10 69.3 39 71.8
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 2.2e-10 69.3 36 77.8
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 2.9e-10 68.9 29 93.1
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 2.9e-10 68.9 97 43.3
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 2.9e-10 68.9 39 66.7
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 2.9e-10 68.9 55 58.2
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 3.7e-10 68.6 31 87.1
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 3.7e-10 68.6 31 87.1
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 4.9e-10 68.2 69 53.6
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 8.3e-10 67.4 55 56.4
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 8.3e-10 67.4 55 56.4
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 1.4e-09 66.6 77 50.6
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 1.4e-09 66.6 64 56.2
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 1.9e-09 66.2 37 67.6
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 1.9e-09 66.2 35 77.1
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 2.4e-09 65.9 39 69.2
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 2.4e-09 65.9 36 69.4
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 5.4e-09 64.7 79 50.6
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 7.1e-09 64.3 34 73.5
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 7.1e-09 64.3 93 41.9
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 1.2e-08 63.5 92 42.4
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 1.6e-08 63.2 89 44.9
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 1.6e-08 63.2 97 42.3
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 1.6e-08 63.2 58 50.0
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 2.1e-08 62.8 29 82.8
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 2.1e-08 62.8 31 74.2
Pp3c10_3490 Physcomitrium patens HOM05D007510 ORTHO05D009587 6.0e-08 61.2 35 68.6
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 1.3e-07 60.1 32 68.8
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 1.1e-06 57.0 53 50.9
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 2.5e-06 55.8 97 38.1
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 3.3e-06 55.5 36 58.3
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 3.3e-06 55.5 36 58.3


User provided reference genes

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