Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 6.8e-119 430.6 212 100.0
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 1.0e-61 240.7 173 70.5
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 3.8e-61 238.8 176 69.9
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 3.5e-59 232.3 171 69.6
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 4.6e-59 231.9 171 67.8
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 1.8e-58 229.9 176 67.6
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 5.1e-58 228.4 170 68.8
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 2.0e-54 216.5 173 63.6
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 3.4e-54 215.7 109 96.3
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 3.4e-54 215.7 168 66.7
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 7.7e-54 214.5 187 58.8
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 1.6e-51 206.8 154 64.3
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 2.7e-51 206.1 172 59.9
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 3.6e-51 205.7 171 62.6
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 6.1e-51 204.9 172 61.6
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.4e-50 203.8 165 60.0
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 1.4e-50 203.8 173 58.4
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 1.8e-50 203.4 172 61.6
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 2.3e-50 203.0 138 69.6
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 3.0e-50 202.6 130 72.3
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 3.9e-50 202.2 152 65.1
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 5.1e-50 201.8 177 58.2
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 6.7e-50 201.4 142 67.6
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 1.1e-49 200.7 141 68.1
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 1.1e-49 200.7 157 65.0
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 2.0e-49 199.9 154 62.3
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 2.5e-49 199.5 154 62.3
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 3.3e-49 199.1 154 63.0
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 3.3e-49 199.1 154 61.7
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 3.3e-49 199.1 154 65.6
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 5.7e-49 198.4 177 57.1
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 9.7e-49 197.6 150 65.3
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 1.7e-48 196.8 137 70.1
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 1.7e-48 196.8 150 66.0
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 1.7e-48 196.8 154 62.3
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 2.2e-48 196.4 129 72.9
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 2.8e-48 196.1 154 61.7
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 2.8e-48 196.1 173 59.0
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 2.8e-48 196.1 173 59.0
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 3.7e-48 195.7 148 67.6
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 4.8e-48 195.3 140 67.9
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 6.3e-48 194.9 150 66.0
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 6.3e-48 194.9 139 69.1
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 6.3e-48 194.9 139 69.1
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 8.2e-48 194.5 111 81.1
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 1.1e-47 194.1 152 63.2
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 1.4e-47 193.7 154 61.0
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 3.1e-47 192.6 170 58.2
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 3.1e-47 192.6 154 60.4
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 3.1e-47 192.6 154 59.7
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 3.1e-47 192.6 134 68.7
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 3.1e-47 192.6 169 59.8
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 4.1e-47 192.2 170 58.2
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 4.1e-47 192.2 154 61.0
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 5.3e-47 191.8 177 55.9
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 6.9e-47 191.4 141 65.2
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 6.9e-47 191.4 135 65.2
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 1.2e-46 190.7 138 64.5
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 2.6e-46 189.5 158 58.2
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 2.6e-46 189.5 172 58.1
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 4.5e-46 188.7 175 57.1
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 5.9e-46 188.3 127 66.9
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 7.7e-46 188.0 149 61.1
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 7.7e-46 188.0 129 68.2
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 7.7e-46 188.0 129 66.7
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 3.8e-45 185.7 158 58.2
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 6.5e-45 184.9 117 75.2
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 6.5e-45 184.9 129 68.2
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 6.5e-45 184.9 154 60.4
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 1.1e-44 184.1 177 56.5
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 2.5e-44 183.0 126 69.0
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 4.7e-43 178.7 130 63.1
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 4.7e-43 178.7 193 52.3
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 6.1e-43 178.3 153 57.5
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 6.1e-43 178.3 130 63.8
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.8e-42 176.8 189 49.7
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 8.8e-42 174.5 128 64.1
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 1.1e-41 174.1 128 66.4
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 2.0e-41 173.3 108 70.4
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 2.6e-41 172.9 127 63.8
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 1.3e-40 170.6 127 63.8
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 1.8e-39 166.8 133 62.4
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 2.4e-39 166.4 178 48.9
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 7.0e-39 164.9 101 71.3
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 2.6e-38 162.9 159 52.8
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 4.5e-38 162.2 101 69.3
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 5.9e-38 161.8 121 60.3
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 6.1e-35 151.8 133 60.2
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 4.0e-34 149.1 127 56.7
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 9.7e-33 144.4 118 58.5
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 1.3e-32 144.1 90 68.9
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 2.8e-32 142.9 108 64.8
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 4.1e-31 139.0 145 55.9
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 1.3e-29 134.0 118 53.4
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 4.2e-28 129.0 120 50.8
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 1.6e-27 127.1 142 46.5
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 2.3e-26 123.2 125 48.0
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 1.5e-25 120.6 89 58.4
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 9.1e-23 111.3 131 47.3
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 9.1e-23 111.3 122 47.5
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 1.6e-22 110.5 133 48.9
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 3.2e-20 102.8 59 71.2
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 1.0e-18 97.8 70 65.7
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 1.2e-17 94.4 134 47.8
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 8.3e-16 88.2 95 45.3
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 6.1e-11 72.0 94 45.7
HPP92_015957 Vanilla planifolia HOM05D007226 ORTHO05D009160 1.6e-06 57.4 41 56.1


User provided reference genes

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