Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.X2XK4P Arachis hypogaea HOM05D007045 ORTHO05D008872 5.3e-53 211.1 133 100.0
arahy.Tifrunner.gnm1.ann1.X6PR1P Arachis hypogaea HOM05D007045 ORTHO05D008872 6.3e-46 187.6 106 96.2
Psat1g052360 Pisum sativum HOM05D007045 ORTHO05D008872 3.8e-35 151.8 129 68.2
Ca_04126_v3 Cicer arietinum L. HOM05D007045 ORTHO05D008872 6.5e-35 151.0 134 67.9
TPR.G25217 Trifolium pratense HOM05D007045 ORTHO05D008872 6.5e-35 151.0 133 69.9
Medtr6g004010 Medicago truncatula HOM05D007045 ORTHO05D008872 1.1e-34 150.2 134 67.2
Glyma.05G000800 Glycine max HOM05D007045 ORTHO05D008872 1.8e-32 142.9 134 64.9
GSVIVG01024412001 Vitis vinifera HOM05D007045 ORTHO05D008872 2.6e-31 139.0 133 62.4
Glyma.19G000800 Glycine max HOM05D007045 ORTHO05D008872 3.4e-31 138.7 106 73.6
Lj2g0018633 Lotus japonicus HOM05D007045 ORTHO05D008872 9.7e-31 137.1 135 63.7
Eucgr.K00089 Eucalyptus grandis HOM05D007045 ORTHO05D008872 1.7e-30 136.3 105 69.5
Dinv29160 Davidia involucrata HOM05D007045 ORTHO05D008872 3.7e-30 135.2 101 74.3
CiPaw.05G239000 Carya illinoinensis HOM05D007045 ORTHO05D008872 4.8e-30 134.8 133 60.2
QL09p024203 Quercus lobata HOM05D007045 ORTHO05D008872 6.3e-30 134.4 132 59.1
QL09p024468 Quercus lobata HOM05D007045 ORTHO05D008872 6.3e-30 134.4 132 59.1
Manes.08G162500 Manihot esculenta HOM05D007045 ORTHO05D008872 1.1e-29 133.7 133 58.6
Cfa015871 Carpinus fangiana HOM05D007045 ORTHO05D008872 2.4e-29 132.5 105 66.7
Phvul.004G000900 Phaseolus vulgaris HOM05D007045 ORTHO05D008872 4.1e-29 131.7 133 66.9
MSTRG.26931 Avicennia marina HOM05D007045 ORTHO05D008872 1.6e-28 129.8 135 65.2
FAN03G1405 Fragaria x ananassa HOM05D007045 ORTHO05D008872 2.7e-28 129.0 133 56.4
TAR375G0210 Trochodendron aralioides HOM05D007045 ORTHO05D008872 2.7e-28 129.0 135 57.0
VMungo0464G1228 Vigna mungo HOM05D007045 ORTHO05D008872 4.5e-28 128.3 133 58.6
CSS0008098 Camellia sinensis var. sinensis HOM05D007045 ORTHO05D008872 5.9e-28 127.9 133 63.9
Prupe.2G325600 Prunus persica HOM05D007045 ORTHO05D008872 7.7e-28 127.5 133 54.9
FAN10G3708 Fragaria x ananassa HOM05D007045 ORTHO05D008872 1.0e-27 127.1 133 66.2
Nn1g01937 Nelumbo nucifera HOM05D007045 ORTHO05D008872 1.3e-27 126.7 135 59.3
FvH4_7g33930 Fragaria vesca HOM05D007045 ORTHO05D008872 1.7e-27 126.3 133 54.9
FAN01G0253 Fragaria x ananassa HOM05D007045 ORTHO05D008872 1.7e-27 126.3 133 54.9
HanXRQChr05g0141731 Helianthus annuus HOM05D007045 ORTHO05D008872 1.7e-27 126.3 101 66.3
SGA_v2.0_scaffold44G16886 Striga asiatica HOM05D007045 ORTHO05D008872 1.7e-27 126.3 135 55.6
RcHm_v2.0_Chr1g0384121 Rosa chinensis HOM05D007045 ORTHO05D008872 2.9e-27 125.6 133 64.7
Solyc03g096960.3 Solanum lycopersicum HOM05D007045 ORTHO05D008872 2.9e-27 125.6 135 63.7
Sopen03g027710 Solanum pennellii HOM05D007045 ORTHO05D008872 2.9e-27 125.6 135 63.0
Lsat_1_v5_gn_9_47440 Lactuca sativa HOM05D007045 ORTHO05D008872 3.8e-27 125.2 101 62.4
Potri.019G049300 Populus trichocarpa HOM05D007045 ORTHO05D008872 5.0e-27 124.8 133 63.2
Actinidia34304 Actinidia chinensis HOM05D007045 ORTHO05D008872 6.5e-27 124.4 135 57.8
ECA232G1212 Erigeron canadensis HOM05D007045 ORTHO05D008872 6.5e-27 124.4 101 62.4
Duzib168G0464 Durio zibethinus HOM05D007045 ORTHO05D008872 1.1e-26 123.6 139 57.6
Actinidia08743 Actinidia chinensis HOM05D007045 ORTHO05D008872 1.5e-26 123.2 133 57.9
Hund09789 Selenicereus undatus HOM05D007045 ORTHO05D008872 2.5e-26 122.5 101 66.3
Nitab4.5_0011930g0010 Nicotiana tabacum HOM05D007045 ORTHO05D008872 5.5e-26 121.3 106 66.0
Oeu041498.1 Olea europaea HOM05D007045 ORTHO05D008872 5.5e-26 121.3 107 64.5
PSO063G7366 Papaver somniferum HOM05D007045 ORTHO05D008872 7.2e-26 120.9 135 54.8
PSO782G4413 Papaver somniferum HOM05D007045 ORTHO05D008872 7.2e-26 120.9 135 54.8
Sc15g0002300 Simmondsia chinensis HOM05D007045 ORTHO05D008872 2.1e-25 119.4 107 62.6
Peaxi162Scf00745g00819 Petunia axillaris HOM05D007045 ORTHO05D008872 2.7e-25 119.0 93 68.8
Gohir.A09G104600 Gossypium hirsutum HOM05D007045 ORTHO05D008872 3.6e-25 118.6 110 62.7
Ciclev10022834m.g Citrus clementina HOM05D007045 ORTHO05D008872 4.7e-25 118.2 136 53.7
PGSC0003DMG400000566 Solanum tuberosum HOM05D007045 ORTHO05D008872 4.7e-25 118.2 101 65.3
Gohir.D09G101300 Gossypium hirsutum HOM05D007045 ORTHO05D008872 8.0e-25 117.5 110 62.7
Gorai.006G118700 Gossypium raimondii HOM05D007045 ORTHO05D008872 8.0e-25 117.5 110 62.7
THA.LOC104821194 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 1.0e-24 117.1 107 60.7
Thecc.09G264800 Theobroma cacao HOM05D007045 ORTHO05D008872 1.0e-24 117.1 137 54.7
Atru.chr12.1972 Acer truncatum HOM05D007045 ORTHO05D008872 1.4e-24 116.7 105 61.9
Sabra19G0058900 Salix brachista HOM05D007045 ORTHO05D008872 1.4e-24 116.7 105 64.8
Hma1.2p1_1680F.1_g297210 Hydrangea macrophylla HOM05D007045 ORTHO05D008872 1.8e-24 116.3 157 49.0
TWI34G0185 Tripterygium wilfordii HOM05D007045 ORTHO05D008872 3.0e-24 115.5 105 61.9
MD07G1308400 Malus domestica HOM05D007045 ORTHO05D008872 4.0e-24 115.2 135 62.2
unitig_92.g28229 Utricularia gibba HOM05D007045 ORTHO05D008872 4.0e-24 115.2 133 56.4
vmacro10189 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 4.0e-24 115.2 76 77.6
vmacro23523 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 4.0e-24 115.2 76 77.6
Sed0010546 Sechium edule HOM05D007045 ORTHO05D008872 5.2e-24 114.8 133 62.4
THA.LOC104805790 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 5.2e-24 114.8 135 54.8
SalBow4G0316 Salvia bowleyana HOM05D007045 ORTHO05D008872 1.2e-23 113.6 105 59.0
EL10Ac3g05081 Beta vulgaris HOM05D007045 ORTHO05D008872 1.5e-23 113.2 100 62.0
Nitab4.5_0000021g0510 Nicotiana tabacum HOM05D007045 ORTHO05D008872 2.6e-23 112.5 127 56.7
Ah.04g156750 Amaranthus hybridus HOM05D007045 ORTHO05D008872 4.4e-23 111.7 101 63.4
Sp1g07240 Schrenkiella parvula HOM05D007045 ORTHO05D008872 4.4e-23 111.7 133 54.1
Thhalv10009120m.g Eutrema salsugineum HOM05D007045 ORTHO05D008872 5.7e-23 111.3 133 53.4
DCAR_020406 Daucus carota HOM05D007045 ORTHO05D008872 7.5e-23 110.9 101 61.4
AT1G08580 Arabidopsis thaliana HOM05D007045 ORTHO05D008872 9.8e-23 110.5 133 51.1
CAN.G303.80 Capsicum annuum HOM05D007045 ORTHO05D008872 9.8e-23 110.5 91 65.9
CDE03G0192 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 2.2e-22 109.4 133 58.6
AUR62002059 Chenopodium quinoa HOM05D007045 ORTHO05D008872 2.2e-22 109.4 133 52.6
AL1G19010 Arabidopsis lyrata HOM05D007045 ORTHO05D008872 2.8e-22 109.0 133 57.1
CsaV3_3G015710 Cucumis sativus L. HOM05D007045 ORTHO05D008872 2.8e-22 109.0 133 62.4
PGR142G4292 Punica granatum HOM05D007045 ORTHO05D008872 2.8e-22 109.0 136 49.3
Aa31sc20G150 Aethionema arabicum HOM05D007045 ORTHO05D008872 4.8e-22 108.2 135 51.1
A06p05570 Brassica napus HOM05D007045 ORTHO05D008872 6.3e-22 107.8 133 49.6
BraA06t23765Z Brassica rapa HOM05D007045 ORTHO05D008872 6.3e-22 107.8 133 49.6
MELO3C006770.2 Cucumis melo HOM05D007045 ORTHO05D008872 6.3e-22 107.8 133 62.4
AUR62028173 Chenopodium quinoa HOM05D007045 ORTHO05D008872 1.1e-21 107.1 133 57.9
COL.COLO4_25316 Corchorus olitorius HOM05D007045 ORTHO05D008872 1.8e-21 106.3 134 53.0
Migut.F00099 Erythranthe guttata HOM05D007045 ORTHO05D008872 2.4e-21 105.9 133 51.9
SalBow4G2109 Salvia bowleyana HOM05D007045 ORTHO05D008872 2.4e-21 105.9 85 63.5
CANSAT56G0844 Cannabis sativa HOM05D007045 ORTHO05D008872 4.1e-21 105.1 91 63.7
BcaB07g34101 Brassica carinata HOM05D007045 ORTHO05D008872 7.0e-21 104.4 133 48.1
C05p06680 Brassica napus HOM05D007045 ORTHO05D008872 7.0e-21 104.4 133 48.1
BolC5t29428H Brassica oleracea HOM05D007045 ORTHO05D008872 7.0e-21 104.4 133 48.1
CANSAT56G3248 Cannabis sativa HOM05D007045 ORTHO05D008872 7.0e-21 104.4 82 65.9
MD01G1235600 Malus domestica HOM05D007045 ORTHO05D008872 7.0e-21 104.4 77 67.5
HPP92_009021 Vanilla planifolia HOM05D007045 ORTHO05D008872 9.1e-21 104.0 101 59.4
BcaC07g41937 Brassica carinata HOM05D007045 ORTHO05D008872 1.2e-20 103.6 104 54.8
C08p49930 Brassica napus HOM05D007045 ORTHO05D008872 1.2e-20 103.6 104 54.8
BraA09t41928Z Brassica rapa HOM05D007045 ORTHO05D008872 1.6e-20 103.2 104 54.8
A09p65840 Brassica napus HOM05D007045 ORTHO05D008872 2.0e-20 102.8 104 53.8
BolC8t52521H Brassica oleracea HOM05D007045 ORTHO05D008872 2.0e-20 102.8 104 54.8
ATR0829G056 Amborella trichopoda HOM05D007045 ORTHO05D008872 3.5e-20 102.1 110 56.4
CDE06G1066 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 4.5e-20 101.7 78 65.4
Aqoxy3G02091 Aquilegia oxysepala HOM05D007045 ORTHO05D008872 7.7e-20 100.9 136 51.5
Cc02_g00300 Coffea canephora HOM05D007045 ORTHO05D008872 6.6e-19 97.8 145 48.3
ClCG05G007020 Citrullus lanatus HOM05D007045 ORTHO05D008872 9.5e-18 94.0 105 53.3
Potri.013G091200 Populus trichocarpa HOM05D007045 ORTHO05D008872 1.6e-17 93.2 86 59.3
CARHR008480 Cardamine hirsuta HOM05D007045 ORTHO05D008872 6.1e-17 91.3 133 45.9
Os02g0604100 Oryza sativa ssp. japonica HOM05D007045 ORTHO05D008872 3.7e-14 82.0 108 52.8
MELO3C032558.2 Cucumis melo HOM05D007045 ORTHO05D008872 1.4e-13 80.1 76 59.2
Carub.0001s0794 Capsella rubella HOM05D007045 ORTHO05D008872 1.8e-13 79.7 70 57.1
Zm00001eb246550 Zea mays HOM05D007045 ORTHO05D008872 2.3e-11 72.8 108 48.1
Pp3c13_5290 Physcomitrium patens HOM05D007045 ORTHO05D008872 7.5e-07 57.8 142 34.5
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 6.4e-06 54.7 112 45.5


User provided reference genes

Program Settings