Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.X01UQ7 Arachis hypogaea HOM05D003721 ORTHO05D004303 0.0e+00 1370.5 785 100.0
arahy.Tifrunner.gnm1.ann1.J8U9TP Arachis hypogaea HOM05D003721 ORTHO05D004303 0.0e+00 1290.4 785 95.7
Ca_07946_v3 Cicer arietinum L. HOM05D003721 ORTHO05D004303 1.6e-277 959.5 789 71.7
Glyma.09G253700 Glycine max HOM05D003721 ORTHO05D004303 3.4e-272 941.8 783 72.7
Glyma.18G239200 Glycine max HOM05D003721 ORTHO05D004303 4.1e-270 934.9 785 72.0
Lj1g0019249 Lotus japonicus HOM05D003721 ORTHO05D004303 7.7e-269 930.6 791 70.7
Glyma.07G062500 Glycine max HOM05D003721 ORTHO05D004303 5.4e-262 907.9 798 68.3
TPR.G29569 Trifolium pratense HOM05D003721 ORTHO05D004303 5.0e-260 901.4 790 68.7
Medtr7g079200 Medicago truncatula HOM05D003721 ORTHO05D004303 6.2e-258 894.4 788 68.0
Lalb_Chr17g0338961 Lupinus albus HOM05D003721 ORTHO05D004303 2.5e-251 872.5 799 66.1
Glyma.16G030600 Glycine max HOM05D003721 ORTHO05D004303 2.8e-250 869.0 798 65.5
VMungo0331G1476 Vigna mungo HOM05D003721 ORTHO05D004303 5.1e-244 848.2 826 63.3
Phvul.008G057500 Phaseolus vulgaris HOM05D003721 ORTHO05D004303 4.6e-229 798.5 807 63.2
arahy.Tifrunner.gnm1.ann1.QXLJ4L Arachis hypogaea HOM05D003721 ORTHO05D004303 7.8e-229 797.7 800 63.6
Psat3g105680 Pisum sativum HOM05D003721 ORTHO05D004303 3.2e-222 775.8 626 72.4
Phvul.010G105500 Phaseolus vulgaris HOM05D003721 ORTHO05D004303 5.1e-220 768.5 729 64.9
arahy.Tifrunner.gnm1.ann1.M56506 Arachis hypogaea HOM05D003721 ORTHO05D004303 8.7e-220 767.7 800 61.5
Cfa003861 Carpinus fangiana HOM05D003721 ORTHO05D004303 8.1e-218 761.1 811 60.4
Atru.chr5.592 Acer truncatum HOM05D003721 ORTHO05D004303 7.6e-216 754.6 812 60.0
VMungo1383G3272 Vigna mungo HOM05D003721 ORTHO05D004303 1.2e-213 747.3 730 63.7
COL.COLO4_06374 Corchorus olitorius HOM05D003721 ORTHO05D004303 2.3e-212 743.0 805 60.1
Dinv32529 Davidia involucrata HOM05D003721 ORTHO05D004303 1.1e-211 740.7 818 58.2
QL04p055909 Quercus lobata HOM05D003721 ORTHO05D004303 6.2e-210 734.9 802 58.5
Ca_03491_v3 Cicer arietinum L. HOM05D003721 ORTHO05D004303 1.2e-208 730.7 795 58.6
Duzib133G0509 Durio zibethinus HOM05D003721 ORTHO05D004303 3.5e-205 719.2 790 59.0
Thecc.01G351200 Theobroma cacao HOM05D003721 ORTHO05D004303 6.7e-204 714.9 803 57.4
CSS0038344 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 1.1e-203 714.1 798 57.6
CSS0014201 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 4.3e-203 712.2 799 57.8
TPR.G18168 Trifolium pratense HOM05D003721 ORTHO05D004303 2.8e-202 709.5 816 57.2
CiPaw.01G068800 Carya illinoinensis HOM05D003721 ORTHO05D004303 4.5e-200 702.2 811 57.8
Manes.07G084500 Manihot esculenta HOM05D003721 ORTHO05D004303 4.5e-200 702.2 808 57.1
Potri.002G165500 Populus trichocarpa HOM05D003721 ORTHO05D004303 2.9e-199 699.5 814 55.5
Potri.014G091300 Populus trichocarpa HOM05D003721 ORTHO05D004303 3.2e-198 696.0 809 56.2
FAN03G0785 Fragaria x ananassa HOM05D003721 ORTHO05D004303 4.2e-198 695.7 800 56.6
CSS0042065 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 1.5e-195 687.2 804 58.6
RcHm_v2.0_Chr1g0357861 Rosa chinensis HOM05D003721 ORTHO05D004303 4.3e-195 685.6 806 55.8
Medtr8g028445 Medicago truncatula HOM05D003721 ORTHO05D004303 9.7e-195 684.5 797 56.6
TAR629G3186 Trochodendron aralioides HOM05D003721 ORTHO05D004303 2.2e-194 683.3 816 55.0
Nn1g01721 Nelumbo nucifera HOM05D003721 ORTHO05D004303 1.4e-193 680.6 813 55.5
CANSAT94G0013 Cannabis sativa HOM05D003721 ORTHO05D004303 2.0e-192 676.8 804 54.5
FAN10G1929 Fragaria x ananassa HOM05D003721 ORTHO05D004303 2.5e-190 669.8 807 55.1
Ciclev10018933m.g Citrus clementina HOM05D003721 ORTHO05D004303 2.1e-189 666.8 799 55.1
FAN10G1794 Fragaria x ananassa HOM05D003721 ORTHO05D004303 2.1e-189 666.8 807 55.0
MD07G1130300 Malus domestica HOM05D003721 ORTHO05D004303 3.6e-189 666.0 801 55.6
FvH4_7g15532 Fragaria vesca HOM05D003721 ORTHO05D004303 1.0e-188 664.5 807 54.9
Dinv43871 Davidia involucrata HOM05D003721 ORTHO05D004303 2.3e-188 663.3 815 54.2
FAN06G3247 Fragaria x ananassa HOM05D003721 ORTHO05D004303 1.1e-187 661.0 807 54.6
Sabra14G0066200 Salix brachista HOM05D003721 ORTHO05D004303 1.1e-187 661.0 850 52.9
TWI59G1183 Tripterygium wilfordii HOM05D003721 ORTHO05D004303 5.7e-187 658.7 810 54.6
Rhsim07G0009400 Rhododendron simsii HOM05D003721 ORTHO05D004303 3.4e-184 649.4 949 47.7
FAN06G4946 Fragaria x ananassa HOM05D003721 ORTHO05D004303 3.2e-182 642.9 831 52.9
Sed0001790 Sechium edule HOM05D003721 ORTHO05D004303 3.2e-182 642.9 811 54.5
vmacro13221 Vaccinium macrocarpon HOM05D003721 ORTHO05D004303 1.0e-180 637.9 843 50.8
GSVIVG01027009001 Vitis vinifera HOM05D003721 ORTHO05D004303 1.0e-180 637.9 726 55.5
PSO170G3080 Papaver somniferum HOM05D003721 ORTHO05D004303 1.1e-179 634.4 802 52.5
Lalb_Chr04g0259321 Lupinus albus HOM05D003721 ORTHO05D004303 1.5e-179 634.0 515 71.5
Gohir.A11G093000 Gossypium hirsutum HOM05D003721 ORTHO05D004303 4.4e-179 632.5 784 54.3
Duzib138G0478 Durio zibethinus HOM05D003721 ORTHO05D004303 9.7e-179 631.3 827 52.4
Prupe.2G178900 Prunus persica HOM05D003721 ORTHO05D004303 4.8e-178 629.0 789 52.9
Cc02_g38690 Coffea canephora HOM05D003721 ORTHO05D004303 5.3e-177 625.5 793 52.1
Gohir.D12G110000 Gossypium hirsutum HOM05D003721 ORTHO05D004303 1.0e-175 621.3 806 53.0
Actinidia20169 Actinidia chinensis HOM05D003721 ORTHO05D004303 6.5e-175 618.6 813 52.3
CsaV3_6G000920 Cucumis sativus L. HOM05D003721 ORTHO05D004303 1.1e-174 617.8 806 52.9
PSO063G0643 Papaver somniferum HOM05D003721 ORTHO05D004303 1.5e-171 607.4 802 51.1
Solyc01g095210.3 Solanum lycopersicum HOM05D003721 ORTHO05D004303 2.8e-170 603.2 790 51.4
Sed0002636 Sechium edule HOM05D003721 ORTHO05D004303 3.7e-170 602.8 792 51.8
Sopen01g039000 Solanum pennellii HOM05D003721 ORTHO05D004303 1.4e-169 600.9 787 51.5
Hund16678 Selenicereus undatus HOM05D003721 ORTHO05D004303 1.6e-168 597.4 785 53.0
Lj7A506T70 Lonicera japonica HOM05D003721 ORTHO05D004303 3.5e-168 596.3 801 52.3
ECA240G1536 Erigeron canadensis HOM05D003721 ORTHO05D004303 4.2e-166 589.3 755 50.7
Peaxi162Scf00020g01717 Petunia axillaris HOM05D003721 ORTHO05D004303 2.7e-165 586.6 793 54.4
SGA_v2.0_scaffold95G28800 Striga asiatica HOM05D003721 ORTHO05D004303 6.8e-164 582.0 796 50.8
AUR62004419 Chenopodium quinoa HOM05D003721 ORTHO05D004303 5.7e-163 578.9 809 50.7
Haze_15580 Corylus avellana HOM05D003721 ORTHO05D004303 2.2e-162 577.0 623 60.0
Haze_15575 Corylus avellana HOM05D003721 ORTHO05D004303 8.3e-162 575.1 623 60.0
DCAR_008641 Daucus carota HOM05D003721 ORTHO05D004303 9.1e-161 571.6 810 49.5
AUR62022625 Chenopodium quinoa HOM05D003721 ORTHO05D004303 1.6e-160 570.9 809 50.1
Gohir.A12G106100 Gossypium hirsutum HOM05D003721 ORTHO05D004303 3.5e-160 569.7 799 50.1
ClCG06G003380 Citrullus lanatus HOM05D003721 ORTHO05D004303 5.9e-160 568.9 872 48.1
EL10Ac1g00346 Beta vulgaris HOM05D003721 ORTHO05D004303 1.0e-159 568.2 809 50.6
CAN.G78.136 Capsicum annuum HOM05D003721 ORTHO05D004303 1.0e-159 568.2 781 50.2
Gorai.007G104100 Gossypium raimondii HOM05D003721 ORTHO05D004303 4.2e-158 562.8 800 49.4
PGR031G3178 Punica granatum HOM05D003721 ORTHO05D004303 4.2e-158 562.8 798 49.5
Eucgr.D02329 Eucalyptus grandis HOM05D003721 ORTHO05D004303 6.1e-157 558.9 801 49.4
Sc23g0002500 Simmondsia chinensis HOM05D003721 ORTHO05D004303 1.8e-153 547.4 799 50.2
MD01G1072600 Malus domestica HOM05D003721 ORTHO05D004303 5.9e-152 542.3 801 49.4
Cpa.g.sc11.59 Carica papaya HOM05D003721 ORTHO05D004303 1.5e-150 537.7 527 61.5
Gorai.008G119300 Gossypium raimondii HOM05D003721 ORTHO05D004303 3.3e-150 536.6 807 48.6
Nitab4.5_0000915g0020 Nicotiana tabacum HOM05D003721 ORTHO05D004303 4.3e-150 536.2 789 48.3
Thhalv10005812m.g Eutrema salsugineum HOM05D003721 ORTHO05D004303 8.0e-149 531.9 754 47.2
HanXRQChr06g0166991 Helianthus annuus HOM05D003721 ORTHO05D004303 1.8e-148 530.8 716 49.7
MBI07_g11740_MAGBIO Magnolia biondii HOM05D003721 ORTHO05D004303 5.2e-148 529.3 818 48.0
Sp5g01840 Schrenkiella parvula HOM05D003721 ORTHO05D004303 1.2e-147 528.1 751 47.9
MELO3C021177.2 Cucumis melo HOM05D003721 ORTHO05D004303 8.3e-146 521.9 700 51.3
Nitab4.5_0003501g0020 Nicotiana tabacum HOM05D003721 ORTHO05D004303 2.0e-144 517.3 789 47.3
Ah.05g180090 Amaranthus hybridus HOM05D003721 ORTHO05D004303 1.7e-143 514.2 811 47.7
BcaC07g40669 Brassica carinata HOM05D003721 ORTHO05D004303 3.0e-143 513.5 745 48.6
A09p53630 Brassica napus HOM05D003721 ORTHO05D004303 3.0e-143 513.5 745 48.7
C08p36410 Brassica napus HOM05D003721 ORTHO05D004303 5.0e-143 512.7 745 48.6
BraA09t40785Z Brassica rapa HOM05D003721 ORTHO05D004303 6.6e-143 512.3 745 48.6
BolC8t51224H Brassica oleracea HOM05D003721 ORTHO05D004303 8.6e-143 511.9 745 48.6
Aqoxy5G04062 Aquilegia oxysepala HOM05D003721 ORTHO05D004303 4.3e-142 509.6 812 47.3
AT2G46180 Arabidopsis thaliana HOM05D003721 ORTHO05D004303 1.4e-140 504.6 795 46.4
AL4G45430 Arabidopsis lyrata HOM05D003721 ORTHO05D004303 6.4e-138 495.7 799 46.6
AT3G61570 Arabidopsis thaliana HOM05D003721 ORTHO05D004303 6.4e-138 495.7 754 45.9
Migut.B01806 Erythranthe guttata HOM05D003721 ORTHO05D004303 5.4e-137 492.7 793 47.0
C06p27570 Brassica napus HOM05D003721 ORTHO05D004303 7.0e-137 492.3 758 45.9
A07p25580 Brassica napus HOM05D003721 ORTHO05D004303 1.6e-136 491.1 753 45.7
BraA07t30199Z Brassica rapa HOM05D003721 ORTHO05D004303 4.6e-136 489.6 758 45.1
SalBow3G1665 Salvia bowleyana HOM05D003721 ORTHO05D004303 1.7e-135 487.6 784 46.7
Gohir.D11G097866 Gossypium hirsutum HOM05D003721 ORTHO05D004303 2.3e-135 487.3 629 52.3
BcaC07g40653 Brassica carinata HOM05D003721 ORTHO05D004303 4.3e-134 483.0 755 47.2
AL5G43940 Arabidopsis lyrata HOM05D003721 ORTHO05D004303 9.5e-134 481.9 755 45.3
BolC6t37925H Brassica oleracea HOM05D003721 ORTHO05D004303 1.6e-133 481.1 756 45.2
Lsat_1_v5_gn_3_138600 Lactuca sativa HOM05D003721 ORTHO05D004303 2.8e-133 480.3 752 48.3
CDE02G2110 Ceratophyllum demersum HOM05D003721 ORTHO05D004303 3.2e-129 466.8 789 43.9
ATR1093G009 Amborella trichopoda HOM05D003721 ORTHO05D004303 1.6e-128 464.5 830 43.0
Sp5g32820 Schrenkiella parvula HOM05D003721 ORTHO05D004303 1.6e-128 464.5 759 45.6
BcaC07g42682 Brassica carinata HOM05D003721 ORTHO05D004303 6.0e-128 462.6 672 46.9
HPP92_023080 Vanilla planifolia HOM05D003721 ORTHO05D004303 8.6e-127 458.8 746 45.6
BcaB02g07370 Brassica carinata HOM05D003721 ORTHO05D004303 4.7e-125 453.0 702 45.9
BcaC08g45136 Brassica carinata HOM05D003721 ORTHO05D004303 4.7e-125 453.0 755 44.1
MSTRG.20868 Avicennia marina HOM05D003721 ORTHO05D004303 9.9e-123 445.3 793 44.1
Thhalv10001332m.g Eutrema salsugineum HOM05D003721 ORTHO05D004303 2.9e-122 443.7 795 43.1
THA.LOC104817323 Tarenaya hassleriana HOM05D003721 ORTHO05D004303 5.4e-121 439.5 792 43.8
Aa31LG1G27570 Aethionema arabicum HOM05D003721 ORTHO05D004303 4.6e-120 436.4 786 43.0
TPR.G35781 Trifolium pratense HOM05D003721 ORTHO05D004303 6.0e-120 436.0 388 69.3
unitig_52.g17061 Utricularia gibba HOM05D003721 ORTHO05D004303 3.0e-119 433.7 733 44.9
CDE08G1001 Ceratophyllum demersum HOM05D003721 ORTHO05D004303 3.9e-119 433.3 777 43.0
Oeu010635.1 Olea europaea HOM05D003721 ORTHO05D004303 3.9e-119 433.3 859 39.9
Carub.0004s2886 Capsella rubella HOM05D003721 ORTHO05D004303 5.2e-116 422.9 790 41.6
Zm00001eb042060 Zea mays HOM05D003721 ORTHO05D004303 3.3e-110 403.7 667 42.3
Sabra02G0146000 Salix brachista HOM05D003721 ORTHO05D004303 5.1e-103 379.8 621 45.7
CARHR141460 Cardamine hirsuta HOM05D003721 ORTHO05D004303 5.6e-102 376.3 501 49.5
BcaC07g42673 Brassica carinata HOM05D003721 ORTHO05D004303 2.2e-98 364.4 710 40.8
PGSC0003DMG400000197 Solanum tuberosum HOM05D003721 ORTHO05D004303 7.9e-96 355.9 376 59.3
Os08g0386900 Oryza sativa ssp. japonica HOM05D003721 ORTHO05D004303 3.0e-95 354.0 386 57.5
Mapoly0053s0042 Marchantia polymorpha HOM05D003721 ORTHO05D004303 2.1e-93 347.8 848 36.2
SEGI_16602 Sequoiadendron giganteum HOM05D003721 ORTHO05D004303 1.4e-89 335.1 394 54.6
BcaC07g40657 Brassica carinata HOM05D003721 ORTHO05D004303 2.3e-63 248.1 249 63.1
Pp3c12_14500 Physcomitrium patens HOM05D003721 ORTHO05D004303 6.7e-63 246.5 360 46.4
Hma1.2p1_0623F.1_g191170 Hydrangea macrophylla HOM05D003721 ORTHO05D004303 1.1e-60 239.2 379 45.9
QL01p002178 Quercus lobata HOM05D003721 ORTHO05D004303 1.8e-60 238.4 340 50.0
Actinidia37722 Actinidia chinensis HOM05D003721 ORTHO05D004074 3.3e-54 217.6 397 42.6
arahy.Tifrunner.gnm1.ann1.LL4IHI Arachis hypogaea HOM05D003721 ORTHO05D004303 2.7e-51 208.0 145 77.2
Pp3c3_18730 Physcomitrium patens HOM05D003721 ORTHO05D004303 7.7e-51 206.5 650 32.9
Haze_15579 Corylus avellana HOM05D003721 ORTHO05D004303 1.8e-47 195.3 191 62.8
AagrBONN_evm.TU.Sc2ySwM_369.3 Anthoceros agrestis HOM05D003721 ORTHO05D004303 5.7e-46 190.3 325 39.4
Actinidia10078 Actinidia chinensis HOM05D003721 ORTHO05D004303 1.4e-44 185.7 410 37.6
Haze_15574 Corylus avellana HOM05D003721 ORTHO05D004303 1.8e-36 158.7 171 58.5
Lalb_Chr04g0259331 Lupinus albus HOM05D003721 ORTHO05D004303 6.6e-34 150.2 269 41.6
BcaC08g45231 Brassica carinata HOM05D003721 ORTHO05D004303 1.9e-33 148.7 138 59.4
SGA_v2.0_scaffold4G02274 Striga asiatica HOM05D003721 ORTHO05D004303 3.4e-30 137.9 190 51.1
arahy.Tifrunner.gnm1.ann1.B4ZXCR Arachis hypogaea HOM05D003721 ORTHO05D004303 1.3e-21 109.4 79 79.7
arahy.Tifrunner.gnm1.ann1.TR1UXP Arachis hypogaea HOM05D003721 ORTHO05D004303 2.2e-21 108.6 66 92.4
SHI13345 Sapria himalayana HOM05D003721 ORTHO05D004303 3.7e-21 107.8 120 50.0
arahy.Tifrunner.gnm1.ann1.4H30G8 Arachis hypogaea HOM05D003721 ORTHO05D004303 6.4e-21 107.1 66 90.9
arahy.Tifrunner.gnm1.ann1.EAH0NM Arachis hypogaea HOM05D003721 ORTHO05D004303 8.3e-21 106.7 66 89.4
arahy.Tifrunner.gnm1.ann1.2H8IEQ Arachis hypogaea HOM05D003721 ORTHO05D004303 1.1e-20 106.3 66 90.9
Actinidia37723 Actinidia chinensis HOM05D003721 ORTHO05D004303 5.4e-20 104.0 177 45.2
Cpa.g.sc11.56 Carica papaya HOM05D003721 ORTHO05D004303 5.4e-20 104.0 116 58.6
arahy.Tifrunner.gnm1.ann1.BE33XR Arachis hypogaea HOM05D003721 ORTHO05D004303 2.7e-19 101.7 61 93.4
SEGI_39264 Sequoiadendron giganteum HOM05D003721 ORTHO05D004303 6.0e-19 100.5 373 29.8
arahy.Tifrunner.gnm1.ann1.0WEA7F Arachis hypogaea HOM05D003721 ORTHO05D004303 1.0e-18 99.8 66 86.4
Actinidia21288 Actinidia chinensis HOM05D003721 ORTHO05D004303 6.2e-16 90.5 62 75.8
BcaC08g45137 Brassica carinata HOM05D003721 ORTHO05D004303 2.0e-14 85.5 316 29.1
MCO16G164 Micromonas commoda HOM05D003721 ORTHO05D004303 9.9e-14 83.2 302 29.5
CBR_g40304 Chara braunii HOM05D001539 ORTHO05D000937 3.7e-13 81.3 174 40.2
Cre12.g495800 Chlamydomonas reinhardtii HOM05D003721 ORTHO05D004303 1.1e-12 79.7 203 33.0
Actinidia10079 Actinidia chinensis HOM05D003721 ORTHO05D004303 1.3e-10 72.8 95 50.5
arahy.Tifrunner.gnm1.ann1.N4BQ9I Arachis hypogaea HOM05D003721 ORTHO05D004303 1.1e-09 69.7 43 83.7
arahy.Tifrunner.gnm1.ann1.W0C6E5 Arachis hypogaea HOM05D000200 ORTHO05D000262 4.0e-07 61.2 119 42.0
Carub.0005s2826 Capsella rubella HOM05D003721 ORTHO05D004303 1.5e-06 59.3 178 36.0
Actinidia10077 Actinidia chinensis HOM05D003721 ORTHO05D004303 2.0e-06 58.9 159 40.3


User provided reference genes

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