Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.WSBZ3R Arachis hypogaea HOM05D007582 ORTHO05D009645 1.6e-168 595.9 283 100.0
Gohir.D06G045500 Gossypium hirsutum HOM05D007582 ORTHO05D009645 1.0e-37 161.4 102 72.5
Gorai.010G050500 Gossypium raimondii HOM05D007582 ORTHO05D009645 5.1e-37 159.1 102 71.6
Thecc.08G126100 Theobroma cacao HOM05D007582 ORTHO05D009645 5.6e-36 155.6 102 69.6
Lalb_Chr17g0343701 Lupinus albus HOM05D007582 ORTHO05D009645 1.6e-35 154.1 98 73.5
Medtr1g029990 Medicago truncatula HOM05D007582 ORTHO05D009645 1.6e-35 154.1 94 72.3
Lj1g0018777 Lotus japonicus HOM05D007582 ORTHO05D009645 6.2e-35 152.1 99 70.7
RhsimUnG0092400 Rhododendron simsii HOM05D007582 ORTHO05D009645 2.4e-34 150.2 102 66.7
TPR.G25776 Trifolium pratense HOM05D007582 ORTHO05D009645 4.0e-34 149.4 95 70.5
MD15G1347500 Malus domestica HOM05D007582 ORTHO05D009645 9.0e-34 148.3 100 70.0
TWI34G1919 Tripterygium wilfordii HOM05D007582 ORTHO05D009645 1.2e-33 147.9 102 68.6
vmacro00836 Vaccinium macrocarpon HOM05D007582 ORTHO05D009645 2.0e-33 147.1 101 65.3
Manes.18G077606 Manihot esculenta HOM05D007582 ORTHO05D009645 3.4e-33 146.4 98 68.4
Manes.02G163800 Manihot esculenta HOM05D007582 ORTHO05D009645 5.8e-33 145.6 100 67.0
Solyc06g060300.1 Solanum lycopersicum HOM05D007582 ORTHO05D009645 5.8e-33 145.6 94 67.0
Sopen06g020420 Solanum pennellii HOM05D007582 ORTHO05D009645 7.6e-33 145.2 94 67.0
MELO3C010615.2 Cucumis melo HOM05D007582 ORTHO05D009645 1.3e-32 144.4 98 67.3
MSTRG.22408 Avicennia marina HOM05D007582 ORTHO05D009645 1.7e-32 144.1 95 70.5
Nitab4.5_0003719g0010 Nicotiana tabacum HOM05D007582 ORTHO05D009645 2.2e-32 143.7 94 68.1
Atru.chr13.1488 Acer truncatum HOM05D007582 ORTHO05D009645 2.9e-32 143.3 94 67.0
Potri.002G083100 Populus trichocarpa HOM05D007582 ORTHO05D009645 2.9e-32 143.3 100 63.0
ClCG08G005690 Citrullus lanatus HOM05D007582 ORTHO05D009645 3.8e-32 142.9 100 64.0
Cpa.g.sc64.90 Carica papaya HOM05D007582 ORTHO05D009645 6.4e-32 142.1 99 67.7
Oeu028565.1 Olea europaea HOM05D007582 ORTHO05D009645 8.4e-32 141.7 98 67.3
Prupe.1G495300 Prunus persica HOM05D007582 ORTHO05D009645 1.1e-31 141.4 100 66.0
PGSC0003DMG400041136 Solanum tuberosum HOM05D007582 ORTHO05D009645 1.1e-31 141.4 94 68.1
CAN.G1040.1 Capsicum annuum HOM05D007582 ORTHO05D009645 1.4e-31 141.0 94 66.0
Dinv07214 Davidia involucrata HOM05D007582 ORTHO05D009645 1.9e-31 140.6 101 63.4
RcHm_v2.0_Chr6g0295891 Rosa chinensis HOM05D007582 ORTHO05D009645 2.4e-31 140.2 100 66.0
PGR042G2864 Punica granatum HOM05D007582 ORTHO05D009645 3.2e-31 139.8 92 67.4
Aqoxy6G00171 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 4.2e-31 139.4 94 67.0
Duzib116G0545 Durio zibethinus HOM05D007582 ORTHO05D009645 4.2e-31 139.4 101 62.4
Gohir.A06G045000 Gossypium hirsutum HOM05D007582 ORTHO05D009645 4.2e-31 139.4 82 74.4
TAR381G0802 Trochodendron aralioides HOM05D007582 ORTHO05D009645 4.2e-31 139.4 94 67.0
Sc22g0004000 Simmondsia chinensis HOM05D007582 ORTHO05D009645 5.5e-31 139.0 92 68.5
Lj4P628T29 Lonicera japonica HOM05D007582 ORTHO05D009645 7.1e-31 138.7 94 68.1
PSO528G0093 Papaver somniferum HOM05D007582 ORTHO05D009645 7.1e-31 138.7 94 69.1
CSS0038396 Camellia sinensis var. sinensis HOM05D007582 ORTHO05D009645 1.2e-30 137.9 102 62.7
CAN.G1040.3 Capsicum annuum HOM05D007582 ORTHO05D009645 1.2e-30 137.9 94 64.9
FAN15G1067 Fragaria x ananassa HOM05D007582 ORTHO05D009645 1.2e-30 137.9 97 67.0
Peaxi162Scf00051g00105 Petunia axillaris HOM05D007582 ORTHO05D009645 1.2e-30 137.9 94 67.0
PSO170G1805 Papaver somniferum HOM05D007582 ORTHO05D009645 1.6e-30 137.5 94 70.2
QL09p034466 Quercus lobata HOM05D007582 ORTHO05D009645 1.6e-30 137.5 99 65.7
Migut.N03282 Erythranthe guttata HOM05D007582 ORTHO05D009645 2.7e-30 136.7 94 66.0
CiPaw.05G221000 Carya illinoinensis HOM05D007582 ORTHO05D009645 4.6e-30 136.0 97 67.0
Cc10_g11990 Coffea canephora HOM05D007582 ORTHO05D009645 6.0e-30 135.6 98 61.2
SalBow6G5334 Salvia bowleyana HOM05D007582 ORTHO05D009645 6.0e-30 135.6 94 67.0
SGA_v2.0_scaffold28G11996 Striga asiatica HOM05D007582 ORTHO05D009645 6.0e-30 135.6 95 64.2
CANSAT11G2348 Cannabis sativa HOM05D007582 ORTHO05D009645 7.9e-30 135.2 99 61.6
Nn5g28305 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.3e-29 134.4 101 62.4
Ciclev10002916m.g Citrus clementina HOM05D007582 ORTHO05D009645 1.8e-29 134.0 96 61.5
Haze_00435 Corylus avellana HOM05D007582 ORTHO05D009645 3.0e-29 133.3 99 65.7
Glyma.14G150500 Glycine max HOM05D007582 ORTHO05D009645 5.1e-29 132.5 100 64.0
Sp1g33530 Schrenkiella parvula HOM05D007582 ORTHO05D009645 6.7e-29 132.1 94 64.9
THA.LOC104817375 Tarenaya hassleriana HOM05D007582 ORTHO05D009645 8.7e-29 131.7 99 63.6
BcaB07g33949 Brassica carinata HOM05D007582 ORTHO05D009645 1.1e-28 131.3 94 63.8
Nn1g00264 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.1e-28 131.3 101 62.4
CARHR035920 Cardamine hirsuta HOM05D007582 ORTHO05D009645 1.5e-28 131.0 94 62.8
CDE06G0523 Ceratophyllum demersum HOM05D007582 ORTHO05D009645 1.9e-28 130.6 95 60.0
AT1G44414 Arabidopsis thaliana HOM05D007582 ORTHO05D009645 2.5e-28 130.2 94 64.9
Thhalv10012348m.g Eutrema salsugineum HOM05D007582 ORTHO05D009645 3.3e-28 129.8 94 62.8
Aa31LG6G9350 Aethionema arabicum HOM05D007582 ORTHO05D009645 4.3e-28 129.4 94 60.6
ATR0584G060 Amborella trichopoda HOM05D007582 ORTHO05D009645 7.4e-28 128.6 99 58.6
A06p11790 Brassica napus HOM05D007582 ORTHO05D009645 7.4e-28 128.6 94 63.8
Hma1.2p1_0054F.1_g031010 Hydrangea macrophylla HOM05D007582 ORTHO05D009645 7.4e-28 128.6 94 63.8
Carub.0001s3518 Capsella rubella HOM05D007582 ORTHO05D009645 9.6e-28 128.3 94 62.8
VMungo0647G1492 Vigna mungo HOM05D007582 ORTHO05D009645 9.6e-28 128.3 94 61.7
AL1G52300 Arabidopsis lyrata HOM05D007582 ORTHO05D009645 1.3e-27 127.9 94 62.8
BcaC08g42847 Brassica carinata HOM05D007582 ORTHO05D009645 2.8e-27 126.7 94 66.0
C06p00630 Brassica napus HOM05D007582 ORTHO05D009645 2.8e-27 126.7 94 66.0
BolC6t35199H Brassica oleracea HOM05D007582 ORTHO05D009645 2.8e-27 126.7 94 66.0
Aqoxy6G00227 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 8.2e-27 125.2 87 64.4
DCAR_016167 Daucus carota HOM05D007582 ORTHO05D009645 1.8e-26 124.0 95 58.9
Psat6g041680 Pisum sativum HOM05D007582 ORTHO05D009139 9.0e-26 121.7 84 64.3
Phvul.008G160900 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 1.2e-25 121.3 100 58.0
Phvul.008G167875 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 1.2e-25 121.3 100 58.0
CsaV3_6G034440 Cucumis sativus L. HOM05D007582 ORTHO05D009645 2.0e-25 120.6 89 60.7
HanXRQChr15g0465231 Helianthus annuus HOM05D007582 ORTHO05D009645 2.0e-25 120.6 94 58.5
SHI08583 Sapria himalayana HOM05D007582 ORTHO05D009645 1.3e-24 117.9 104 54.8
Sed0002225 Sechium edule HOM05D007582 ORTHO05D009645 4.9e-24 115.9 65 72.3
HPP92_006841 Vanilla planifolia HOM05D007582 ORTHO05D009645 4.9e-24 115.9 67 70.1
Nn3g18690 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.1e-23 114.8 66 69.7
ECA233G1368 Erigeron canadensis HOM05D007582 ORTHO05D009645 1.8e-21 107.5 88 54.5
Zm00001eb348620 Zea mays HOM05D007582 ORTHO05D009645 1.5e-20 104.4 94 53.2
SMO143G0209 Selaginella moellendorffii HOM05D007582 ORTHO05D009645 8.2e-19 98.6 74 54.1
Os05g0435400 Oryza sativa ssp. japonica HOM05D007582 ORTHO05D009645 5.9e-17 92.4 96 50.0
Pp3c19_19360 Physcomitrium patens HOM05D007582 ORTHO05D009645 5.5e-15 85.9 71 49.3
Mapoly0085s0071 Marchantia polymorpha HOM05D007582 ORTHO05D009645 7.9e-14 82.0 109 34.9
AagrBONN_evm.TU.Sc2ySwM_362.1959 Anthoceros agrestis HOM05D007582 ORTHO05D009645 8.8e-13 78.6 67 53.7
Nitab4.5_0011334g0030 Nicotiana tabacum HOM05D007582 ORTHO05D009645 3.3e-12 76.6 37 78.4
AagrBONN_evm.TU.Sc2ySwM_362.2461 Anthoceros agrestis HOM05D007582 ORTHO05D009645 4.8e-11 72.8 67 46.3
Nn1g08790 Nelumbo nucifera HOM05D007582 ORTHO05D009645 6.3e-11 72.4 35 82.9
Phvul.L001669 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 6.5e-08 62.4 42 64.3
Aa31LG6G9370 Aethionema arabicum HOM05D007582 ORTHO05D009645 4.2e-07 59.7 42 61.9
Aqoxy6G00222 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 5.5e-07 59.3 63 41.3
Nn4g24512 Nelumbo nucifera HOM05D007582 ORTHO05D009645 5.5e-07 59.3 57 49.1


User provided reference genes

Program Settings