Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 6.9e-76 287.3 157 100.0
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 8.5e-58 227.3 129 96.9
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 1.9e-57 226.1 136 93.4
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 7.2e-57 224.2 129 96.1
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 1.9e-54 216.1 127 89.0
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 6.9e-52 207.6 129 90.7
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 5.5e-49 198.0 129 78.3
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 7.9e-48 194.1 129 81.4
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 3.0e-47 192.2 129 76.7
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 7.4e-46 187.6 129 75.2
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 9.7e-46 187.2 129 74.4
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 1.7e-45 186.4 129 72.1
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 6.3e-45 184.5 129 73.6
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 8.2e-45 184.1 129 73.6
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 8.2e-45 184.1 129 73.6
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 1.4e-44 183.3 129 73.6
arahy.Tifrunner.gnm1.ann1.V1GDUY Arachis hypogaea HOM05D006823 ORTHO05D008608 2.0e-43 179.5 112 85.7
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 5.0e-42 174.9 140 66.4
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 1.2e-40 170.2 130 73.8
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 1.8e-39 166.4 151 66.9
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 3.9e-39 165.2 129 65.9
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 6.7e-39 164.5 127 67.7
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 2.0e-38 162.9 132 65.2
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 2.0e-38 162.9 142 58.5
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.0e-38 162.9 142 58.5
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.0e-38 162.9 142 58.5
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.6e-38 162.5 142 58.5
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 2.6e-38 162.5 130 66.2
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 3.3e-38 162.2 135 65.9
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 3.3e-38 162.2 151 58.3
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 4.4e-38 161.8 134 70.9
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 5.7e-38 161.4 135 66.7
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 5.7e-38 161.4 134 64.9
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 9.7e-38 160.6 123 67.5
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.2e-37 159.5 142 57.7
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 2.2e-37 159.5 119 70.6
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 2.8e-37 159.1 134 61.9
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 6.3e-37 157.9 138 63.8
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 1.1e-36 157.1 122 68.9
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 1.4e-36 156.8 122 68.9
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 1.8e-36 156.4 127 64.6
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.8e-36 156.4 127 62.2
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 1.8e-36 156.4 129 65.9
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 2.4e-36 156.0 142 57.0
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 2.4e-36 156.0 122 68.0
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 3.1e-36 155.6 127 65.4
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 4.1e-36 155.2 139 60.4
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 4.1e-36 155.2 127 64.6
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 4.1e-36 155.2 140 58.6
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 9.1e-36 154.1 127 63.0
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 3.5e-35 152.1 127 62.2
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 7.7e-35 151.0 127 61.4
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 1.7e-34 149.8 125 60.8
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 2.2e-34 149.4 116 65.5
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 2.9e-34 149.1 127 62.2
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 2.9e-34 149.1 127 59.8
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 2.9e-34 149.1 127 59.8
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 6.5e-34 147.9 126 65.9
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 6.5e-34 147.9 127 61.4
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 2.5e-33 146.0 116 64.7
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 3.2e-33 145.6 116 64.7
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 5.5e-33 144.8 127 58.3
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 5.5e-33 144.8 127 58.3
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 5.5e-33 144.8 127 58.3
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 9.4e-33 144.1 117 69.2
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 1.6e-32 143.3 131 59.5
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 4.7e-32 141.7 145 56.6
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 6.1e-32 141.4 116 63.8
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 1.4e-31 140.2 124 63.7
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 2.3e-31 139.4 127 59.8
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 3.0e-31 139.0 126 56.3
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 3.0e-31 139.0 129 57.4
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 4.0e-31 138.7 116 62.9
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 1.5e-30 136.7 116 62.1
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 1.5e-30 136.7 131 57.3
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 2.6e-30 136.0 133 63.9
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 2.6e-30 136.0 133 50.4
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 7.5e-30 134.4 117 59.0
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 7.5e-30 134.4 118 66.1
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 9.7e-30 134.0 126 56.3
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 2.2e-29 132.9 118 58.5
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 1.8e-28 129.8 131 54.2
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 7.0e-28 127.9 95 66.3
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 1.6e-27 126.7 102 66.7
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 3.5e-27 125.6 131 53.4
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 5.9e-27 124.8 133 54.1
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 7.7e-27 124.4 133 51.1
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 1.3e-26 123.6 109 56.0
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 8.5e-26 120.9 138 51.4
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 2.5e-25 119.4 99 60.6
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 2.5e-25 119.4 99 60.6
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 1.6e-24 116.7 113 56.6
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 1.4e-23 113.6 134 50.0
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 1.8e-23 113.2 106 58.5
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 1.8e-23 113.2 96 59.4
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 1.5e-22 110.2 113 58.4
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 2.6e-22 109.4 95 65.3
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 7.5e-22 107.8 116 52.6
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 9.8e-22 107.5 92 60.9
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 2.2e-21 106.3 118 55.1
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 4.1e-20 102.1 84 60.7
SMO145G0064 Selaginella moellendorffii HOM05D006823 ORTHO05D008608 1.8e-15 86.7 143 37.8
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 2.6e-14 82.8 108 42.6
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 7.5e-14 81.3 67 61.2
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 7.5e-14 81.3 67 61.2
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 9.8e-14 80.9 125 38.4
arahy.Tifrunner.gnm1.ann1.YLS7HT Arachis hypogaea HOM05D006823 ORTHO05D008608 1.3e-13 80.5 42 100.0
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 1.3e-13 80.5 102 46.1
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 1.1e-12 77.4 113 38.1
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 5.4e-12 75.1 106 41.5
Zm00001eb092000 Zea mays HOM05D006823 ORTHO05D008608 2.0e-11 73.2 136 36.0
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 7.8e-11 71.2 92 38.0
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 2.3e-10 69.7 104 40.4
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.9e-09 66.6 59 57.6
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 4.7e-08 62.0 57 54.4
Cre02.g105287 Chlamydomonas reinhardtii HOM05D004785 ORTHO05D008521 1.5e-06 57.0 65 35.4
Oeu006328.1 Olea europaea HOM05D006753 ORTHO05D008521 2.6e-06 56.2 61 47.5


User provided reference genes

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