Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.WNB9PN Arachis hypogaea HOM05D002598 ORTHO05D023200 6.2e-74 280.8 151 100.0
arahy.Tifrunner.gnm1.ann1.H0Y7G8 Arachis hypogaea HOM05D002598 ORTHO05D023200 4.2e-54 214.9 114 98.2
Lalb_Chr06g0176371 Lupinus albus HOM05D002598 ORTHO05D003130 1.7e-39 166.4 144 67.4
Lj2g0017300 Lotus japonicus HOM05D002598 ORTHO05D003130 2.7e-37 159.1 144 66.7
Glyma.17G186500 Glycine max HOM05D002598 ORTHO05D003130 5.1e-36 154.8 144 65.3
VMungo0464G1285 Vigna mungo HOM05D002598 ORTHO05D003130 1.8e-33 146.4 142 64.8
TPR.G36621 Trifolium pratense HOM05D002598 ORTHO05D003130 2.4e-33 146.0 142 59.9
Ca_04677_v3 Cicer arietinum L. HOM05D002598 ORTHO05D003130 1.5e-32 143.3 148 62.8
Psat1g099480 Pisum sativum HOM05D002598 ORTHO05D003130 3.4e-32 142.1 146 59.6
Phvul.004G075200 Phaseolus vulgaris HOM05D002598 ORTHO05D003130 9.4e-30 134.0 142 60.6
GSVIVG01016319001 Vitis vinifera HOM05D002598 ORTHO05D003130 6.1e-29 131.3 144 54.9
Medtr6g033410 Medicago truncatula HOM05D002598 ORTHO05D003130 2.8e-26 122.5 146 56.2
Prupe.2G217500 Prunus persica HOM05D002598 ORTHO05D003130 1.1e-25 120.6 154 50.6
CiPaw.01G275800 Carya illinoinensis HOM05D002598 ORTHO05D003130 9.1e-25 117.5 149 52.3
Manes.10G043700 Manihot esculenta HOM05D002598 ORTHO05D003130 2.2e-23 112.8 149 49.0
Aqoxy4G00069 Aquilegia oxysepala HOM05D002598 ORTHO05D003130 5.0e-23 111.7 144 49.3
Sc20g0002140 Simmondsia chinensis HOM05D002598 ORTHO05D003130 3.2e-22 109.0 153 49.0
Duzib114G1037 Durio zibethinus HOM05D002598 ORTHO05D003130 9.4e-22 107.5 144 53.5
MD01G1111800 Malus domestica HOM05D002598 ORTHO05D003130 1.6e-21 106.7 156 48.1
Thecc.10G069200 Theobroma cacao HOM05D002598 ORTHO05D003130 2.1e-21 106.3 147 53.7
Potri.008G043400 Populus trichocarpa HOM05D002598 ORTHO05D003130 3.6e-21 105.5 144 48.6
CSS0003608 Camellia sinensis var. sinensis HOM05D002598 ORTHO05D003130 2.3e-20 102.8 142 47.2
FAN27G0297 Fragaria x ananassa HOM05D002598 ORTHO05D003130 2.3e-20 102.8 155 44.5
Gohir.A12G077000 Gossypium hirsutum HOM05D002598 ORTHO05D003130 2.3e-20 102.8 144 52.1
COL.COLO4_07091 Corchorus olitorius HOM05D002598 ORTHO05D003130 6.7e-20 101.3 144 50.7
Gorai.008G083900 Gossypium raimondii HOM05D002598 ORTHO05D003130 6.7e-20 101.3 145 51.0
MD07G1178300 Malus domestica HOM05D002598 ORTHO05D003130 6.7e-20 101.3 154 47.4
Dinv31352 Davidia involucrata HOM05D002598 ORTHO05D003130 1.1e-19 100.5 166 42.2
EL10Ac2g03569 Beta vulgaris HOM05D002598 ORTHO05D003130 1.5e-19 100.1 150 48.7
Cpa.g.sc53.27 Carica papaya HOM05D002598 ORTHO05D003130 2.0e-19 99.8 146 45.9
Gohir.D12G075200 Gossypium hirsutum HOM05D002598 ORTHO05D003130 2.6e-19 99.4 145 49.7
Lj1C922T8 Lonicera japonica HOM05D002598 ORTHO05D003130 7.4e-19 97.8 103 55.3
THA.LOC104826737 Tarenaya hassleriana HOM05D002598 ORTHO05D003130 4.8e-18 95.1 142 46.5
vmacro07161 Vaccinium macrocarpon HOM05D002598 ORTHO05D023200 4.8e-18 95.1 142 44.4
Cfa001600 Carpinus fangiana HOM05D002598 ORTHO05D003130 6.3e-18 94.7 144 45.8
Ciclev10030815m.g Citrus clementina HOM05D002598 ORTHO05D003130 1.4e-17 93.6 147 46.9
Sed0003300 Sechium edule HOM05D002598 ORTHO05D003130 1.4e-17 93.6 144 45.8
Eucgr.G02808 Eucalyptus grandis HOM05D002598 ORTHO05D003130 1.8e-17 93.2 142 43.7
Actinidia02962 Actinidia chinensis HOM05D002598 ORTHO05D003130 2.4e-17 92.8 145 44.1
CsaV3_3G019010 Cucumis sativus L. HOM05D002598 ORTHO05D003130 2.4e-17 92.8 144 47.9
ClCG09G020470 Citrullus lanatus HOM05D002598 ORTHO05D003130 3.1e-17 92.4 146 45.2
Sabra08G0030000 Salix brachista HOM05D002598 ORTHO05D003130 7.0e-17 91.3 144 45.1
TAR627G0637 Trochodendron aralioides HOM05D002598 ORTHO05D003130 9.1e-17 90.9 144 43.1
MSTRG.27469 Avicennia marina HOM05D002598 ORTHO05D003130 1.6e-16 90.1 142 45.1
PGR142G4195 Punica granatum HOM05D002598 ORTHO05D003130 2.0e-16 89.7 144 45.8
Lj1A920T52 Lonicera japonica HOM05D002598 ORTHO05D003130 4.5e-16 88.6 95 55.8
MELO3C019491.2 Cucumis melo HOM05D002598 ORTHO05D003130 5.9e-16 88.2 147 45.6
QL08p056686 Quercus lobata HOM05D002598 ORTHO05D003130 5.9e-16 88.2 144 45.8
Hma1.2p1_0453F.1_g156031 Hydrangea macrophylla HOM05D002598 ORTHO05D003130 1.7e-15 86.7 149 43.6
Cc02_g11370 Coffea canephora HOM05D002598 ORTHO05D003130 2.2e-15 86.3 142 43.0
RcHm_v2.0_Chr5g0044521 Rosa chinensis HOM05D002598 ORTHO05D003130 2.2e-15 86.3 155 40.6
SGA_v2.0_scaffold62G21413 Striga asiatica HOM05D002598 ORTHO05D003130 2.2e-15 86.3 142 41.5
FvH4_2g10660 Fragaria vesca HOM05D002598 ORTHO05D003130 5.0e-15 85.1 155 39.4
TWI15G0990 Tripterygium wilfordii HOM05D002598 ORTHO05D003130 8.5e-15 84.3 153 43.8
DCAR_006461 Daucus carota HOM05D002598 ORTHO05D003130 3.2e-14 82.4 142 44.4
AUR62027930 Chenopodium quinoa HOM05D002598 ORTHO05D003130 4.2e-14 82.0 142 43.7
ATR0763G043 Amborella trichopoda HOM05D002598 ORTHO05D003130 7.2e-14 81.3 152 40.8
AUR62020774 Chenopodium quinoa HOM05D002598 ORTHO05D003130 7.2e-14 81.3 144 44.4
FAN20G0077 Fragaria x ananassa HOM05D002598 ORTHO05D003130 7.2e-14 81.3 155 38.1
Rhsim07G0129500 Rhododendron simsii HOM05D002598 ORTHO05D003130 7.2e-14 81.3 176 39.2
FAN15G1309 Fragaria x ananassa HOM05D002598 ORTHO05D003130 2.7e-13 79.3 155 38.1
Oeu037454.1 Olea europaea HOM05D002598 ORTHO05D003130 8.0e-13 77.8 113 52.2
FAN24G3467 Fragaria x ananassa HOM05D002598 ORTHO05D003130 1.4e-12 77.0 167 36.5
Solyc05g023710.3 Solanum lycopersicum HOM05D002598 ORTHO05D003130 3.0e-12 75.9 142 40.8
Sopen05g018320 Solanum pennellii HOM05D002598 ORTHO05D003130 3.0e-12 75.9 142 40.8
Carub.0005s2223 Capsella rubella HOM05D002598 ORTHO05D003130 6.7e-12 74.7 143 41.3
Lsat_1_v5_gn_5_129941 Lactuca sativa HOM05D002598 ORTHO05D003130 6.7e-12 74.7 142 41.5
unitig_46.g18596 Utricularia gibba HOM05D002598 ORTHO05D003130 3.3e-11 72.4 141 41.1
Sabra16G0323500 Salix brachista HOM05D002598 ORTHO05D023200 1.3e-10 70.5 139 41.0
AL5G36660 Arabidopsis lyrata HOM05D002598 ORTHO05D003130 1.7e-10 70.1 143 39.9
SalBow4G1919 Salvia bowleyana HOM05D002598 ORTHO05D003130 3.7e-10 68.9 105 46.7
Hund22491 Selenicereus undatus HOM05D002598 ORTHO05D003130 3.7e-10 68.9 205 34.1
CAN.G254.9 Capsicum annuum HOM05D002598 ORTHO05D003130 6.3e-10 68.2 143 39.9
Peaxi162Scf00851g00425 Petunia axillaris HOM05D002598 ORTHO05D003130 6.3e-10 68.2 153 37.9
CARHR165560 Cardamine hirsuta HOM05D002598 ORTHO05D003130 8.2e-10 67.8 95 48.4
HanXRQChr14g0455921 Helianthus annuus HOM05D002598 ORTHO05D003130 8.2e-10 67.8 142 39.4
A09p48510 Brassica napus HOM05D002598 ORTHO05D003130 1.1e-09 67.4 98 46.9
BraA09t40303Z Brassica rapa HOM05D002598 ORTHO05D003130 1.1e-09 67.4 98 46.9
ECA234G4551 Erigeron canadensis HOM05D002598 ORTHO05D003130 1.4e-09 67.0 142 40.8
Nn4g24880 Nelumbo nucifera HOM05D002598 ORTHO05D003130 1.8e-09 66.6 153 36.6
BcaB01g00088 Brassica carinata HOM05D002598 ORTHO05D003130 2.4e-09 66.2 97 47.4
Haze_16928 Corylus avellana HOM05D002598 ORTHO05D003130 3.1e-09 65.9 114 38.6
Aa31LG10G10530 Aethionema arabicum HOM05D002598 ORTHO05D003130 1.2e-08 63.9 96 51.0
Sp5g06970 Schrenkiella parvula HOM05D002598 ORTHO05D003130 1.6e-08 63.5 143 37.1
BcaC07g39875 Brassica carinata HOM05D002598 ORTHO05D003130 3.5e-08 62.4 106 44.3
C08p30800 Brassica napus HOM05D002598 ORTHO05D003130 3.5e-08 62.4 106 44.3
Atru.chr12.651 Acer truncatum HOM05D002598 ORTHO05D023200 4.5e-08 62.0 142 38.7
MELO3C025507.2 Cucumis melo HOM05D002598 ORTHO05D003130 5.9e-08 61.6 94 47.9
BolC8t50702H Brassica oleracea HOM05D002598 ORTHO05D003130 1.9e-06 56.6 96 43.8


User provided reference genes

Program Settings