Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.WHCD0B Arachis hypogaea HOM05D001966 ORTHO05D007227 2.5e-83 312.0 149 100.0
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 1.5e-51 206.5 208 57.7
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 1.4e-41 173.3 199 50.3
Sed0014217 Sechium edule HOM05D001966 ORTHO05D007227 1.1e-30 137.1 176 46.0
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 1.3e-28 130.2 168 50.0
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 2.5e-27 125.9 164 48.2
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 1.4e-25 120.2 164 47.0
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 1.4e-25 120.2 164 47.0
LjContig00319g0014927 Lotus japonicus HOM05D001966 ORTHO05D007227 2.0e-24 116.3 127 55.1
arahy.Tifrunner.gnm1.ann1.KZKE62 Arachis hypogaea HOM05D001966 ORTHO05D007227 2.9e-23 112.5 159 46.5
arahy.Tifrunner.gnm1.ann1.3I0RGA Arachis hypogaea HOM05D001966 ORTHO05D007227 8.4e-23 110.9 142 46.5
VMungo1127G1224 Vigna mungo HOM05D001966 ORTHO05D007227 1.4e-22 110.2 162 43.8
arahy.Tifrunner.gnm1.ann1.Q8ISGW Arachis hypogaea HOM05D001966 ORTHO05D007227 4.2e-22 108.6 75 73.3
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 6.0e-21 104.8 126 47.6
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 5.1e-20 101.7 158 41.1
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 1.5e-19 100.1 144 43.1
CDE02G0843 Ceratophyllum demersum HOM05D001966 ORTHO05D007227 1.9e-19 99.8 140 42.9
Sed0012652 Sechium edule HOM05D001966 ORTHO05D007227 3.3e-19 99.0 104 53.8
VMungo0647G0507 Vigna mungo HOM05D006032 ORTHO05D007227 6.2e-18 94.7 87 57.5
Gorai.006G045900 Gossypium raimondii HOM05D001966 ORTHO05D007227 3.4e-16 89.0 138 44.9
Phvul.003G142600 Phaseolus vulgaris HOM05D001966 ORTHO05D007227 3.4e-16 89.0 83 60.2
Gohir.1Z049882 Gossypium hirsutum HOM05D001966 ORTHO05D007227 1.3e-15 87.0 71 63.4
Gohir.A04G039270 Gossypium hirsutum HOM05D001966 ORTHO05D007227 1.3e-15 87.0 71 63.4
Gohir.A05G323724 Gossypium hirsutum HOM05D001966 ORTHO05D007227 1.3e-15 87.0 71 63.4
Gohir.A09G039165 Gossypium hirsutum HOM05D001966 ORTHO05D007227 4.9e-15 85.1 130 44.6
arahy.Tifrunner.gnm1.ann1.ZHN7AL Arachis hypogaea HOM05D001966 ORTHO05D007227 8.4e-15 84.3 102 48.0
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 1.9e-14 83.2 104 46.2
unitig_91.g26520 Utricularia gibba HOM05D001966 ORTHO05D007227 3.2e-14 82.4 81 56.8
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 7.1e-14 81.3 94 51.1
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 9.3e-14 80.9 93 51.6
VMungo0464G1535 Vigna mungo HOM05D001966 ORTHO05D007227 9.3e-14 80.9 89 50.6
Gohir.D02G151976 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.1e-13 79.7 58 70.7
arahy.Tifrunner.gnm1.ann1.DHX5K3 Arachis hypogaea HOM05D001966 ORTHO05D007227 2.7e-13 79.3 45 86.7
SHI36539 Sapria himalayana HOM05D001966 ORTHO05D007227 3.5e-13 79.0 125 43.2
arahy.Tifrunner.gnm1.ann1.UQV5ZS Arachis hypogaea HOM05D001966 ORTHO05D007227 3.0e-12 75.9 40 87.5
arahy.Tifrunner.gnm1.ann1.Z8IK0I Arachis hypogaea HOM05D001966 ORTHO05D007227 3.0e-12 75.9 40 87.5
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.7e-12 74.7 100 46.0
Sc25g0002010 Simmondsia chinensis HOM05D001966 ORTHO05D007227 6.7e-12 74.7 142 38.0
CAN.G1648.17 Capsicum annuum HOM05D001966 ORTHO05D007227 8.7e-12 74.3 93 44.1
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 8.7e-12 74.3 77 53.2
Lsat_1_v5_gn_3_110440 Lactuca sativa HOM05D001966 ORTHO05D007227 8.7e-12 74.3 77 53.2
Lsat_1_v5_gn_4_147680 Lactuca sativa HOM05D001966 ORTHO05D007227 8.7e-12 74.3 77 53.2
Lsat_1_v5_gn_4_147860 Lactuca sativa HOM05D001966 ORTHO05D007227 8.7e-12 74.3 77 53.2
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 8.7e-12 74.3 77 53.2
Lsat_1_v5_gn_6_94301 Lactuca sativa HOM05D001966 ORTHO05D007227 8.7e-12 74.3 77 53.2
Lsat_1_v5_gn_9_39281 Lactuca sativa HOM05D001966 ORTHO05D007227 8.7e-12 74.3 77 53.2
arahy.Tifrunner.gnm1.ann1.HASF1T Arachis hypogaea HOM05D001966 ORTHO05D007227 2.5e-11 72.8 46 78.3
Gohir.D02G016950 Gossypium hirsutum HOM05D001966 ORTHO05D007227 2.5e-11 72.8 71 54.9
Potri.011G074201 Populus trichocarpa HOM05D001966 ORTHO05D007227 2.5e-11 72.8 75 53.3
Gohir.D09G040060 Gossypium hirsutum HOM05D001966 ORTHO05D007227 3.3e-11 72.4 125 39.2
CAN.G386.21 Capsicum annuum HOM05D001966 ORTHO05D010055 4.3e-11 72.0 93 43.0
arahy.Tifrunner.gnm1.ann1.MZV923 Arachis hypogaea HOM05D001966 ORTHO05D007227 5.6e-11 71.6 44 79.5
CAN.G593.3 Capsicum annuum HOM05D001966 ORTHO05D004271 1.3e-10 70.5 83 45.8
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 2.8e-10 69.3 145 37.9
Cfa023004 Carpinus fangiana HOM05D001966 ORTHO05D007227 2.8e-10 69.3 94 42.6
arahy.Tifrunner.gnm1.ann1.77ZW6W Arachis hypogaea HOM05D001966 ORTHO05D007227 1.1e-09 67.4 94 43.6
arahy.Tifrunner.gnm1.ann1.EGZ6K4 Arachis hypogaea HOM05D001966 ORTHO05D007227 1.1e-09 67.4 94 43.6
Gorai.005G020800 Gossypium raimondii HOM05D001966 ORTHO05D007227 1.1e-09 67.4 71 52.1
Phvul.002G203700 Phaseolus vulgaris HOM05D001966 ORTHO05D007227 1.4e-09 67.0 35 85.7
SalBow1G8704 Salvia bowleyana HOM05D001966 ORTHO05D007227 1.4e-09 67.0 78 47.4
HPP92_028385 Vanilla planifolia HOM05D001966 ORTHO05D007227 3.1e-09 65.9 94 39.4
SHI27036 Sapria himalayana HOM05D001966 ORTHO05D010986 4.0e-09 65.5 72 51.4
Sopen06g012240 Solanum pennellii HOM05D000014 ORTHO05D000016 4.0e-09 65.5 33 90.9
Gorai.008G099100 Gossypium raimondii HOM05D001070 ORTHO05D010233 6.9e-09 64.7 46 67.4
Cpa.g.sc61.38 Carica papaya HOM05D001966 ORTHO05D007227 1.2e-08 63.9 35 85.7
Medtr0002s0250 Medicago truncatula HOM05D001966 ORTHO05D007227 1.2e-08 63.9 101 41.6
Gohir.D12G091540 Gossypium hirsutum HOM05D001070 ORTHO05D010233 1.5e-08 63.5 46 65.2
BcaNung01515 Brassica carinata HOM05D001966 ORTHO05D010449 5.8e-08 61.6 36 83.3
arahy.Tifrunner.gnm1.ann1.F2PHFK Arachis hypogaea HOM05D000890 ORTHO05D000697 7.6e-08 61.2 49 61.2
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 7.6e-08 61.2 100 38.0
arahy.Tifrunner.gnm1.ann1.I9YN8I Arachis hypogaea HOM05D001966 ORTHO05D007227 9.9e-08 60.8 95 38.9
DCAR_001522 Daucus carota HOM05D001966 ORTHO05D007227 9.9e-08 60.8 94 39.4
BcaC04g22012 Brassica carinata HOM05D001966 ORTHO05D007227 2.2e-07 59.7 36 83.3
MD15G1346300 Malus domestica HOM05D001966 ORTHO05D007227 2.9e-07 59.3 36 80.6
EL10Ac8g19705 Beta vulgaris HOM05D001966 ORTHO05D007227 3.8e-07 58.9 96 38.5
Medtr3g035620 Medicago truncatula HOM05D001966 ORTHO05D007227 3.8e-07 58.9 94 40.4
arahy.Tifrunner.gnm1.ann1.FN7561 Arachis hypogaea HOM05D001966 ORTHO05D007227 4.9e-07 58.5 72 51.4
Ca_03784_v3 Cicer arietinum L. HOM05D001966 ORTHO05D010449 4.9e-07 58.5 41 63.4
Atru.chr9.266 Acer truncatum HOM05D001966 ORTHO05D007227 1.4e-06 57.0 60 51.7
Oeu022559.1 Olea europaea HOM05D001966 ORTHO05D011119 1.9e-06 56.6 33 78.8


User provided reference genes

Program Settings