Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.WH3GKX Arachis hypogaea HOM05D009256 ORTHO05D011704 1.3e-122 443.0 215 100.0
arahy.Tifrunner.gnm1.ann1.QZF0BL Arachis hypogaea HOM05D009256 ORTHO05D011704 1.2e-86 323.6 156 99.4
arahy.Tifrunner.gnm1.ann1.Q2LPLX Arachis hypogaea HOM05D009256 ORTHO05D011704 1.3e-85 320.1 154 100.0
arahy.Tifrunner.gnm1.ann1.V5LEJ9 Arachis hypogaea HOM05D009256 ORTHO05D011704 1.3e-85 320.1 154 100.0
TPR.G11370 Trifolium pratense HOM05D009256 ORTHO05D011704 1.3e-85 320.1 154 100.0
TAR629G1300 Trochodendron aralioides HOM05D009256 ORTHO05D011704 1.3e-85 320.1 154 100.0
BNapus_Darmor_BZH_scaffold_234p00110 Brassica napus HOM05D009256 ORTHO05D011704 2.7e-83 312.4 154 98.7
BraSC77t46657Z Brassica rapa HOM05D009256 ORTHO05D011704 2.7e-83 312.4 154 98.7
FAN08G1097 Fragaria x ananassa HOM05D009256 ORTHO05D011704 9.4e-76 287.3 142 95.8
Nn1g10063 Nelumbo nucifera HOM05D009256 ORTHO05D011704 2.1e-59 233.0 182 69.2
Nn1g10130 Nelumbo nucifera HOM05D009256 ORTHO05D011704 2.1e-59 233.0 182 69.2
Medtr4g091430 Medicago truncatula HOM05D009256 ORTHO05D011704 3.6e-59 232.3 133 85.7
SEGI_15462 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 4.6e-38 162.2 127 67.7
SEGI_06644 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 5.8e-25 118.6 106 61.3
SEGI_13999 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 5.8e-25 118.6 106 61.3
SEGI_16475 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 5.8e-25 118.6 106 61.3
SEGI_23954 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 5.8e-25 118.6 106 61.3
SHI36845 Sapria himalayana HOM05D009256 ORTHO05D011704 7.6e-25 118.2 90 68.9
Sopen10g009710 Solanum pennellii HOM05D000014 ORTHO05D000093 7.6e-25 118.2 70 85.7
SEGI_30283 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 1.2e-17 94.4 50 88.0
SEGI_38700 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 9.3e-15 84.7 79 59.5
arahy.Tifrunner.gnm1.ann1.IG3D37 Arachis hypogaea HOM05D000963 ORTHO05D010073 1.3e-13 80.9 98 52.0
arahy.Tifrunner.gnm1.ann1.LW54SX Arachis hypogaea HOM05D000963 ORTHO05D010073 3.9e-13 79.3 96 51.0
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 1.5e-12 77.4 101 47.5
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 1.5e-12 77.4 101 47.5
arahy.Tifrunner.gnm1.ann1.AKG7GD Arachis hypogaea HOM05D000963 ORTHO05D010073 2.5e-12 76.6 94 51.1
arahy.Tifrunner.gnm1.ann1.F7VFKS Arachis hypogaea HOM05D000963 ORTHO05D010073 2.5e-12 76.6 99 50.5
arahy.Tifrunner.gnm1.ann1.V5YKW3 Arachis hypogaea HOM05D000963 ORTHO05D010073 2.5e-12 76.6 94 51.1
Sed0001563 Sechium edule HOM05D000963 ORTHO05D010073 2.5e-12 76.6 95 49.5
Sed0028031 Sechium edule HOM05D000963 ORTHO05D010073 2.5e-12 76.6 95 49.5
VMungo1024G0003 Vigna mungo HOM05D009256 ORTHO05D011704 9.6e-12 74.7 68 63.2
Sc21g0003830 Simmondsia chinensis HOM05D000963 ORTHO05D013492 1.6e-11 73.9 97 49.5
Solyc09g090005.1 Solanum lycopersicum HOM05D000052 ORTHO05D000046 2.1e-11 73.6 47 72.3
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 1.1e-10 71.2 69 58.0
arahy.Tifrunner.gnm1.ann1.3JL12K Arachis hypogaea HOM05D000963 ORTHO05D010073 1.8e-10 70.5 89 50.6
arahy.Tifrunner.gnm1.ann1.9ZA4TL Arachis hypogaea HOM05D000963 ORTHO05D010073 1.8e-10 70.5 89 50.6
arahy.Tifrunner.gnm1.ann1.MCAP06 Arachis hypogaea HOM05D000963 ORTHO05D010073 1.8e-10 70.5 89 50.6
Lsat_1_v5_gn_0_47661 Lactuca sativa HOM05D000963 ORTHO05D010073 1.8e-10 70.5 89 50.6
Lsat_1_v5_gn_2_97101 Lactuca sativa HOM05D000963 ORTHO05D010073 1.8e-10 70.5 89 50.6
Lsat_1_v5_gn_6_94240 Lactuca sativa HOM05D000963 ORTHO05D010073 1.8e-10 70.5 89 50.6
Lsat_1_v5_gn_8_139860 Lactuca sativa HOM05D000963 ORTHO05D010073 1.8e-10 70.5 89 50.6
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 3.1e-10 69.7 62 61.3
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.0e-10 69.3 56 66.1
arahy.Tifrunner.gnm1.ann1.H38MEV Arachis hypogaea HOM05D000963 ORTHO05D010073 5.3e-10 68.9 56 66.1
Medtr4g451295 Medicago truncatula HOM05D000963 ORTHO05D010073 5.3e-10 68.9 56 66.1
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 5.3e-10 68.9 56 66.1
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 9.0e-10 68.2 65 58.5
SEGI_39281 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 1.2e-09 67.8 52 69.2
BolC4t23503H Brassica oleracea HOM05D009256 ORTHO05D011704 3.4e-09 66.2 41 80.5
arahy.Tifrunner.gnm1.ann1.BP3EV9 Arachis hypogaea HOM05D000963 ORTHO05D010073 5.8e-09 65.5 89 48.3
arahy.Tifrunner.gnm1.ann1.W1SKJ5 Arachis hypogaea HOM05D000963 ORTHO05D013225 7.6e-09 65.1 53 66.0
FAN13G1378 Fragaria x ananassa HOM05D000963 ORTHO05D010073 1.3e-08 64.3 56 62.5
Gohir.A12G138580 Gossypium hirsutum HOM05D000963 ORTHO05D010073 1.7e-08 63.9 66 56.1
Sopen11g020210 Solanum pennellii HOM05D000963 ORTHO05D013225 2.4e-07 60.1 87 42.5
ECA039G0009 Erigeron canadensis HOM05D008105 ORTHO05D010309 4.2e-07 59.3 32 90.6
Gorai.011G106300 Gossypium raimondii HOM05D000963 ORTHO05D010073 4.2e-07 59.3 56 57.1
arahy.Tifrunner.gnm1.ann1.0FXL97 Arachis hypogaea HOM05D000963 ORTHO05D010073 5.5e-07 58.9 48 66.7
CDE02G3457 Ceratophyllum demersum HOM05D000963 ORTHO05D010073 5.5e-07 58.9 48 66.7
Gohir.A04G039240 Gossypium hirsutum HOM05D000963 ORTHO05D010073 5.5e-07 58.9 48 66.7
QL10p017078 Quercus lobata HOM05D000963 ORTHO05D010073 5.5e-07 58.9 48 66.7
SEGI_01254 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 5.5e-07 58.9 56 57.1
unitig_91.g26521 Utricularia gibba HOM05D000963 ORTHO05D010201 5.5e-07 58.9 48 66.7
Gohir.1Z056500 Gossypium hirsutum HOM05D000963 ORTHO05D010073 1.6e-06 57.4 48 64.6
arahy.Tifrunner.gnm1.ann1.WPV0UJ Arachis hypogaea HOM05D000963 ORTHO05D010073 2.1e-06 57.0 48 64.6
Oeu026870.1 Olea europaea HOM05D000097 ORTHO05D000041 7.9e-06 55.1 23 100.0
Sopen10g016580 Solanum pennellii HOM05D000963 ORTHO05D010073 7.9e-06 55.1 74 48.6


User provided reference genes

Program Settings