Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.WFJR7S Arachis hypogaea HOM05D008037 ORTHO05D004271 1.4e-59 232.6 106 100.0
arahy.Tifrunner.gnm1.ann1.20TFSQ Arachis hypogaea HOM05D008037 ORTHO05D004271 9.8e-50 199.9 143 72.0
arahy.Tifrunner.gnm1.ann1.P2FSG5 Arachis hypogaea HOM05D008037 ORTHO05D004271 9.8e-50 199.9 143 72.0
arahy.Tifrunner.gnm1.ann1.LBLK2X Arachis hypogaea HOM05D008037 ORTHO05D004271 4.2e-45 184.5 133 72.2
arahy.Tifrunner.gnm1.ann1.ASR258 Arachis hypogaea HOM05D008037 ORTHO05D004271 8.0e-44 180.3 139 68.3
arahy.Tifrunner.gnm1.ann1.KJ09M7 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.3e-41 172.9 96 86.5
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 2.9e-33 145.2 84 83.3
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 5.0e-30 134.4 122 59.8
FAN22G1916 Fragaria x ananassa HOM05D008037 ORTHO05D004271 3.3e-29 131.7 125 58.4
MBI08_g48225_MAGBIO Magnolia biondii HOM05D008037 ORTHO05D004271 1.0e-27 126.7 116 60.3
COL.COLO4_33462 Corchorus olitorius HOM05D008016 ORTHO05D004271 2.3e-27 125.6 104 64.4
RcHm_v2.0_Chr7g0221131 Rosa chinensis HOM05D008016 ORTHO05D004271 1.7e-25 119.4 119 56.3
FAN26G0971 Fragaria x ananassa HOM05D008037 ORTHO05D004271 4.9e-25 117.9 130 55.4
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 2.7e-23 112.1 128 53.1
SHI36397 Sapria himalayana HOM05D008037 ORTHO05D004271 3.9e-22 108.2 140 47.9
Solyc11g021160.1 Solanum lycopersicum HOM05D001966 ORTHO05D010055 2.4e-16 89.0 86 53.5
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 4.1e-16 88.2 44 88.6
Nitab4.5_0000066g0170 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.2e-15 86.7 81 59.3
Nitab4.5_0001727g0130 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.1e-15 85.9 94 52.1
Nitab4.5_0012234g0010 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.5e-15 85.1 83 56.6
EL10As10g23963 Beta vulgaris HOM05D008037 ORTHO05D004271 1.3e-14 83.2 90 53.3
Hund25912 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund27633 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund27757 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund27833 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund28332 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund28440 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund28538 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund28614 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund28956 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund28981 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund29028 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund29091 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund29181 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund29249 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund29256 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund29263 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund29290 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund29318 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund29436 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund29853 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund30002 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund30263 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund30448 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund30632 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Hund30993 Selenicereus undatus HOM05D008037 ORTHO05D004271 2.3e-14 82.4 90 52.2
Solyc00g500344.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 2.3e-14 82.4 56 69.6
RcHm_v2.0_Chr2g0095251 Rosa chinensis HOM05D008016 ORTHO05D004271 5.1e-14 81.3 45 84.4
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 1.9e-13 79.3 44 79.5
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 3.3e-13 78.6 38 89.5
ClCG11G009640 Citrullus lanatus HOM05D008354 ORTHO05D010055 3.3e-13 78.6 58 67.2
Nitab4.5_0008665g0060 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.3e-13 78.6 84 53.6
Oeu040617.1 Olea europaea HOM05D008016 ORTHO05D004271 3.3e-13 78.6 45 82.2
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 5.6e-13 77.8 77 51.9
Nitab4.5_0004841g0080 Nicotiana tabacum HOM05D008037 ORTHO05D004271 4.7e-12 74.7 69 58.0
COL.COLO4_03213 Corchorus olitorius HOM05D001966 ORTHO05D010986 6.2e-12 74.3 35 91.4
CDE02G0533 Ceratophyllum demersum HOM05D008037 ORTHO05D004271 8.1e-12 73.9 46 76.1
Nitab4.5_0006502g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.4e-11 73.2 94 47.9
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.1e-11 72.0 68 55.9
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 4.0e-11 71.6 59 61.0
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 6.8e-11 70.9 36 86.1
arahy.Tifrunner.gnm1.ann1.XGYT8C Arachis hypogaea HOM05D008037 ORTHO05D004271 1.2e-10 70.1 31 96.8
Gohir.A09G103364 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.5e-10 69.7 33 93.9
Gohir.D07G151450 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.5e-10 69.7 43 72.1
Lalb_Chr03g0039361 Lupinus albus HOM05D008016 ORTHO05D004271 1.5e-10 69.7 33 93.9
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 3.4e-10 68.6 31 96.8
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 3.4e-10 68.6 31 96.8
Potri.008G221801 Populus trichocarpa HOM05D008037 ORTHO05D004271 4.4e-10 68.2 31 93.5
Solyc09g011150.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 4.4e-10 68.2 34 88.2
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 5.8e-10 67.8 33 90.9
Nitab4.5_0001761g0150 Nicotiana tabacum HOM05D008037 ORTHO05D004271 7.6e-10 67.4 32 87.5
Solyc04g082990.3 Solanum lycopersicum HOM05D005978 ORTHO05D004271 7.6e-10 67.4 82 47.6
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 1.3e-09 66.6 31 93.5
Gohir.A07G174766 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.3e-09 66.6 33 87.9
Nitab4.5_0005831g0120 Nicotiana tabacum HOM05D008354 ORTHO05D010055 1.3e-09 66.6 32 90.6
MD03G1269900 Malus domestica HOM05D008037 ORTHO05D004271 2.9e-09 65.5 44 72.7
Lsat_1_v5_gn_2_98441 Lactuca sativa HOM05D008016 ORTHO05D004271 3.8e-09 65.1 31 90.3
Gohir.A09G101825 Gossypium hirsutum HOM05D008016 ORTHO05D004271 4.9e-09 64.7 30 93.3
arahy.Tifrunner.gnm1.ann1.61DFKT Arachis hypogaea HOM05D008037 ORTHO05D004271 1.9e-08 62.8 30 90.0
arahy.Tifrunner.gnm1.ann1.KSIE27 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.9e-08 62.8 50 60.0
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 1.9e-08 62.8 31 90.3
Nitab4.5_0001986g0120 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.9e-08 62.8 76 48.7
CAN.G134.6 Capsicum annuum HOM05D008037 ORTHO05D004271 4.1e-08 61.6 34 79.4
Hund28446 Selenicereus undatus HOM05D008259 ORTHO05D004271 9.2e-08 60.5 32 81.2
Hund28585 Selenicereus undatus HOM05D008259 ORTHO05D004271 9.2e-08 60.5 32 81.2
Hund28944 Selenicereus undatus HOM05D008259 ORTHO05D004271 9.2e-08 60.5 32 81.2
Hund28949 Selenicereus undatus HOM05D008259 ORTHO05D004271 9.2e-08 60.5 32 81.2
Hund28959 Selenicereus undatus HOM05D008259 ORTHO05D004271 9.2e-08 60.5 32 81.2
Hund29107 Selenicereus undatus HOM05D008259 ORTHO05D004271 9.2e-08 60.5 32 81.2
Hund29184 Selenicereus undatus HOM05D008259 ORTHO05D004271 9.2e-08 60.5 32 81.2
Hund29242 Selenicereus undatus HOM05D008259 ORTHO05D004271 9.2e-08 60.5 32 81.2
Hund29271 Selenicereus undatus HOM05D008259 ORTHO05D004271 9.2e-08 60.5 32 81.2
Hund29275 Selenicereus undatus HOM05D008259 ORTHO05D004271 9.2e-08 60.5 32 81.2
Hund29279 Selenicereus undatus HOM05D008259 ORTHO05D004271 9.2e-08 60.5 32 81.2
Hund29283 Selenicereus undatus HOM05D008259 ORTHO05D004271 9.2e-08 60.5 32 81.2
Hund29451 Selenicereus undatus HOM05D008259 ORTHO05D004271 9.2e-08 60.5 32 81.2
Hund29497 Selenicereus undatus HOM05D008259 ORTHO05D004271 9.2e-08 60.5 32 81.2
Hund29785 Selenicereus undatus HOM05D008259 ORTHO05D004271 9.2e-08 60.5 32 81.2
Hund29912 Selenicereus undatus HOM05D008259 ORTHO05D004271 9.2e-08 60.5 32 81.2
Hund30004 Selenicereus undatus HOM05D008259 ORTHO05D004271 9.2e-08 60.5 32 81.2
Hund30064 Selenicereus undatus HOM05D008259 ORTHO05D004271 9.2e-08 60.5 32 81.2
Hund30203 Selenicereus undatus HOM05D008259 ORTHO05D004271 9.2e-08 60.5 32 81.2
Nitab4.5_0027992g0040 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.2e-07 60.1 30 86.7
Peaxi162Scf00210g00153 Petunia axillaris HOM05D008037 ORTHO05D004271 1.6e-07 59.7 31 83.9
Glyma.15G274900 Glycine max HOM05D008016 ORTHO05D004271 6.0e-07 57.8 30 83.3
Migut.A01208 Erythranthe guttata HOM05D008016 ORTHO05D004271 7.8e-07 57.4 24 100.0
Solyc05g047670.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 7.8e-07 57.4 43 65.1
Gohir.A13G086605 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.0e-06 57.0 30 86.7
arahy.Tifrunner.gnm1.ann1.M1FG7L Arachis hypogaea HOM05D008354 ORTHO05D010055 1.7e-06 56.2 29 82.8
Sc02g0004570 Simmondsia chinensis HOM05D008037 ORTHO05D004271 1.7e-06 56.2 32 78.1
EL10Ac5g11360 Beta vulgaris HOM05D008037 ORTHO05D004271 2.3e-06 55.8 30 80.0
Solyc03g058260.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 3.0e-06 55.5 46 56.5
arahy.Tifrunner.gnm1.ann1.096T0J Arachis hypogaea HOM05D004182 ORTHO05D007321 8.6e-06 53.9 31 80.6


User provided reference genes

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