Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 2.4e-136 488.8 237 100.0
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 1.0e-115 420.2 237 89.5
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 2.1e-92 342.8 257 69.6
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 1.0e-91 340.5 254 67.3
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 1.0e-91 340.5 254 67.3
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 7.7e-87 324.3 251 64.5
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 1.3e-86 323.6 249 66.3
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 2.2e-86 322.8 254 64.6
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 1.1e-85 320.5 249 65.9
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 9.4e-85 317.4 249 62.7
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 9.4e-85 317.4 248 64.5
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 4.7e-84 315.1 250 63.6
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 6.1e-84 314.7 218 70.2
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 6.1e-84 314.7 245 64.1
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 6.1e-84 314.7 246 64.6
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 7.9e-84 314.3 248 61.7
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 3.0e-83 312.4 247 65.6
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 3.9e-83 312.0 247 64.0
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 3.9e-83 312.0 250 63.6
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 5.1e-83 311.6 242 65.3
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 5.1e-83 311.6 205 72.2
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 6.7e-83 311.2 245 64.9
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 6.7e-83 311.2 245 64.9
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 5.7e-82 308.1 253 63.6
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 1.7e-81 306.6 251 62.9
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 2.2e-81 306.2 247 62.3
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 2.8e-81 305.8 250 62.8
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 4.8e-81 305.1 201 71.1
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 1.8e-80 303.1 243 61.7
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 1.8e-80 303.1 246 61.0
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 2.4e-80 302.8 250 60.4
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 7.0e-80 301.2 254 61.8
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 9.1e-80 300.8 250 60.4
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 2.0e-79 299.7 250 60.8
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 2.6e-79 299.3 254 59.1
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 3.5e-79 298.9 252 60.3
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 7.7e-79 297.7 249 61.0
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.0e-78 297.4 251 59.0
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 1.7e-78 296.6 243 62.6
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.7e-78 296.6 250 59.2
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 2.2e-78 296.2 250 60.4
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 5.0e-78 295.0 246 62.6
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 6.5e-78 294.7 248 60.1
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 2.5e-77 292.7 252 60.7
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 2.5e-77 292.7 209 67.5
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 3.2e-77 292.4 247 59.9
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 4.2e-77 292.0 249 59.4
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 5.5e-77 291.6 246 59.3
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 5.5e-77 291.6 211 65.9
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 9.4e-77 290.8 207 65.2
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 4.7e-76 288.5 244 61.9
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 4.7e-76 288.5 244 60.2
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 4.7e-76 288.5 243 60.9
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 6.1e-76 288.1 207 66.2
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 6.1e-76 288.1 207 66.2
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 8.0e-76 287.7 248 58.9
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 1.0e-75 287.3 226 62.4
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 1.0e-75 287.3 204 68.1
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 1.4e-75 287.0 248 59.7
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 6.7e-75 284.6 246 58.5
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 6.7e-75 284.6 241 61.8
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 1.1e-74 283.9 227 62.6
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 1.5e-74 283.5 249 58.6
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 2.0e-74 283.1 225 60.9
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 5.7e-74 281.6 218 64.2
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 5.7e-74 281.6 202 64.4
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 5.7e-74 281.6 238 59.2
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 7.4e-74 281.2 242 57.4
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 9.7e-74 280.8 250 58.0
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 1.3e-73 280.4 198 66.2
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 1.7e-73 280.0 201 68.2
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 2.8e-73 279.3 200 66.5
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 3.7e-73 278.9 252 56.0
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 4.8e-73 278.5 216 63.4
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 4.8e-73 278.5 195 67.2
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 8.2e-73 277.7 250 57.6
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 1.1e-72 277.3 208 63.0
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.1e-72 277.3 241 61.4
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 1.4e-72 276.9 199 68.8
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 3.1e-72 275.8 255 56.9
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 2.0e-71 273.1 188 67.6
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 2.6e-71 272.7 185 68.6
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 4.5e-71 271.9 198 66.7
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 4.5e-71 271.9 197 66.0
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 5.0e-70 268.5 239 56.5
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 5.0e-70 268.5 254 55.1
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 5.0e-70 268.5 253 57.3
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 1.5e-69 266.9 239 56.9
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 5.5e-69 265.0 224 58.0
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 4.7e-68 261.9 171 71.3
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 1.0e-67 260.8 204 61.8
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 5.2e-67 258.5 190 64.7
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 1.7e-65 253.4 178 67.4
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 4.8e-65 251.9 250 51.6
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 1.4e-64 250.4 170 68.8
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 3.5e-63 245.7 169 68.0
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 4.2e-61 238.8 229 54.6
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 3.0e-59 232.6 169 65.7
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.4e-56 223.0 131 75.6
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 5.5e-53 211.8 163 58.3
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 9.5e-53 211.1 170 60.6
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 6.3e-49 198.4 163 52.8
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 2.3e-46 189.9 202 45.0
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 2.5e-45 186.4 266 41.4
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 1.9e-32 143.7 172 49.4
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 5.2e-27 125.6 158 40.5
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.3e-22 110.9 71 70.4
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 1.9e-21 107.1 64 68.8
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 6.2e-20 102.1 222 34.2
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 8.1e-20 101.7 60 70.0
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 1.5e-18 97.4 62 71.0
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.1e-11 73.2 79 48.1
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 2.2e-09 67.0 62 46.8


User provided reference genes

Program Settings