Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.W3SN8F Arachis hypogaea HOM05D001301 ORTHO05D001169 1.4e-59 232.6 113 100.0
arahy.Tifrunner.gnm1.ann1.DS2FEI Arachis hypogaea HOM05D001301 ORTHO05D001169 1.1e-46 189.9 112 82.1
arahy.Tifrunner.gnm1.ann1.P3SEJU Arachis hypogaea HOM05D001301 ORTHO05D001169 4.1e-46 188.0 112 81.2
arahy.Tifrunner.gnm1.ann1.8XX2CF Arachis hypogaea HOM05D001301 ORTHO05D001169 2.5e-35 152.1 99 75.8
arahy.Tifrunner.gnm1.ann1.TUH2A5 Arachis hypogaea HOM05D001301 ORTHO05D001169 2.5e-35 152.1 99 76.8
arahy.Tifrunner.gnm1.ann1.AZBY4S Arachis hypogaea HOM05D001301 ORTHO05D001169 8.0e-34 147.1 109 68.8
Lalb_Chr05g0218381 Lupinus albus HOM05D001301 ORTHO05D001169 8.0e-26 120.6 116 56.9
Medtr4g088980 Medicago truncatula HOM05D001301 ORTHO05D001169 1.2e-24 116.7 107 55.1
Ca_18529_v3 Cicer arietinum L. HOM05D001301 ORTHO05D009365 7.5e-24 114.0 107 57.0
Lj4g0024126 Lotus japonicus HOM05D001301 ORTHO05D001169 6.4e-23 110.9 97 60.8
Lalb_Chr16g0383641 Lupinus albus HOM05D001301 ORTHO05D001169 8.3e-23 110.5 117 51.3
Lalb_Chr09g0327581 Lupinus albus HOM05D001301 ORTHO05D001169 1.4e-22 109.8 119 55.5
Glyma.07G195000 Glycine max HOM05D001301 ORTHO05D001169 7.0e-22 107.5 114 52.6
Glyma.13G181500 Glycine max HOM05D001301 ORTHO05D001169 1.6e-21 106.3 113 54.0
Psat7g112920 Pisum sativum HOM05D001301 ORTHO05D001169 2.0e-21 105.9 109 54.1
TPR.G11985 Trifolium pratense HOM05D001301 ORTHO05D001169 3.5e-21 105.1 108 53.7
Glyma.13G241300 Glycine max HOM05D001301 ORTHO05D001169 1.0e-20 103.6 121 50.4
Phvul.006G187800 Phaseolus vulgaris HOM05D001301 ORTHO05D001169 3.0e-20 102.1 125 52.8
MELO3C007298.2 Cucumis melo HOM05D001301 ORTHO05D001169 3.9e-20 101.7 122 49.2
Medtr2g013220 Medicago truncatula HOM05D001301 ORTHO05D001169 3.9e-20 101.7 121 52.1
Manes.16G025400 Manihot esculenta HOM05D001301 ORTHO05D001169 6.6e-20 100.9 131 47.3
ClCG01G022820 Citrullus lanatus HOM05D001301 ORTHO05D001169 8.6e-20 100.5 122 48.4
CsaV3_6G050000 Cucumis sativus L. HOM05D001301 ORTHO05D001169 1.1e-19 100.1 122 48.4
VMungo0540G2516 Vigna mungo HOM05D001301 ORTHO05D001169 1.9e-19 99.4 124 50.8
Phvul.002G227200 Phaseolus vulgaris HOM05D001301 ORTHO05D001169 2.5e-19 99.0 114 50.0
Glyma.15G072100 Glycine max HOM05D001301 ORTHO05D001169 5.6e-19 97.8 128 48.4
Potri.004G040100 Populus trichocarpa HOM05D001301 ORTHO05D001169 7.3e-19 97.4 125 52.8
arahy.Tifrunner.gnm1.ann1.UW7KXU Arachis hypogaea HOM05D001301 ORTHO05D001169 2.1e-18 95.9 128 46.1
Lj6g0002128 Lotus japonicus HOM05D001301 ORTHO05D001169 2.1e-18 95.9 126 47.6
arahy.Tifrunner.gnm1.ann1.XDV1T5 Arachis hypogaea HOM05D001301 ORTHO05D001169 2.8e-18 95.5 128 46.1
Sabra04G0024700 Salix brachista HOM05D001301 ORTHO05D001169 3.6e-18 95.1 124 51.6
TPR.G36811 Trifolium pratense HOM05D001301 ORTHO05D001169 8.0e-18 94.0 125 51.2
Haze_06502 Corylus avellana HOM05D001301 ORTHO05D001169 1.1e-17 93.6 143 45.5
QL05p039495 Quercus lobata HOM05D001301 ORTHO05D001169 1.8e-17 92.8 139 42.4
VMungo0251G3090 Vigna mungo HOM05D001301 ORTHO05D001169 1.2e-16 90.1 114 46.5
Psat1g206000 Pisum sativum HOM05D001301 ORTHO05D001169 1.5e-16 89.7 120 45.0
Potri.011G049500 Populus trichocarpa HOM05D001301 ORTHO05D001169 2.6e-16 89.0 126 47.6
Atru.chr10.1941 Acer truncatum HOM05D001301 ORTHO05D001169 5.8e-16 87.8 90 55.6
Manes.17G043200 Manihot esculenta HOM05D001301 ORTHO05D001169 1.3e-15 86.7 129 43.4
Prupe.4G043600 Prunus persica HOM05D001301 ORTHO05D001169 1.3e-15 86.7 130 43.8
Sed0011756 Sechium edule HOM05D001301 ORTHO05D001169 2.2e-15 85.9 124 42.7
CiPaw.09G057200 Carya illinoinensis HOM05D001301 ORTHO05D001169 6.4e-15 84.3 139 43.9
Duzib235G0960 Durio zibethinus HOM05D001301 ORTHO05D001169 6.4e-15 84.3 132 43.2
CiPaw.10G046900 Carya illinoinensis HOM05D001301 ORTHO05D001169 1.9e-14 82.8 134 43.3
PGR042G0790 Punica granatum HOM05D001301 ORTHO05D001169 3.2e-14 82.0 133 38.3
Ciclev10015933m.g Citrus clementina HOM05D001301 ORTHO05D001169 4.1e-14 81.6 130 43.8
Ca_00320_v3 Cicer arietinum L. HOM05D001301 ORTHO05D001169 7.0e-14 80.9 124 43.5
Thecc.06G191000 Theobroma cacao HOM05D001301 ORTHO05D001169 7.0e-14 80.9 131 41.2
Duzib160G0836 Durio zibethinus HOM05D001301 ORTHO05D001169 1.6e-13 79.7 132 40.9
Sabra11G0034000 Salix brachista HOM05D001301 ORTHO05D001169 2.0e-13 79.3 127 48.0
Gohir.A10G024000 Gossypium hirsutum HOM05D001301 ORTHO05D001169 2.7e-13 79.0 134 40.3
MD10G1296900 Malus domestica HOM05D001301 ORTHO05D001169 2.7e-13 79.0 125 45.6
Lalb_Chr18g0059731 Lupinus albus HOM05D001301 ORTHO05D001169 6.0e-13 77.8 127 44.1
Gohir.D10G024700 Gossypium hirsutum HOM05D001301 ORTHO05D001169 7.8e-13 77.4 134 39.6
Gorai.011G026000 Gossypium raimondii HOM05D001301 ORTHO05D001169 7.8e-13 77.4 134 39.6
Gohir.D06G211001 Gossypium hirsutum HOM05D001301 ORTHO05D001169 1.3e-12 76.6 132 40.2
Gorai.010G255300 Gossypium raimondii HOM05D001301 ORTHO05D001169 2.3e-12 75.9 132 39.4
COL.COLO4_31505 Corchorus olitorius HOM05D001301 ORTHO05D001169 1.5e-11 73.2 131 38.9
FAN11G1172 Fragaria x ananassa HOM05D001301 ORTHO05D001169 1.9e-11 72.8 131 41.2
FvH4_3g04840 Fragaria vesca HOM05D001301 ORTHO05D001169 2.5e-11 72.4 133 42.1
Eucgr.E03349 Eucalyptus grandis HOM05D001301 ORTHO05D001169 3.3e-11 72.0 134 41.0
Duzib192G0584 Durio zibethinus HOM05D001301 ORTHO05D001169 4.3e-11 71.6 111 42.3
FAN21G0622 Fragaria x ananassa HOM05D001301 ORTHO05D001169 5.6e-11 71.2 133 42.9
FAN25G3473 Fragaria x ananassa HOM05D001301 ORTHO05D001169 5.6e-11 71.2 132 41.7
Cpa.g.sc27.70 Carica papaya HOM05D001301 ORTHO05D001169 1.2e-10 70.1 134 37.3
MD05G1316400 Malus domestica HOM05D001301 ORTHO05D001169 2.1e-10 69.3 127 41.7
FAN16G1573 Fragaria x ananassa HOM05D001301 ORTHO05D001169 2.8e-10 68.9 132 40.9
CDE02G1056 Ceratophyllum demersum HOM05D001301 ORTHO05D001169 1.1e-09 67.0 139 38.8
CDE08G0237 Ceratophyllum demersum HOM05D001301 ORTHO05D001169 5.2e-09 64.7 144 34.7
TAR629G3428 Trochodendron aralioides HOM05D001301 ORTHO05D001169 5.2e-09 64.7 126 37.3
CANSAT35G1798 Cannabis sativa HOM05D001301 ORTHO05D001169 8.9e-09 63.9 147 34.7
RcHm_v2.0_Chr5g0008001 Rosa chinensis HOM05D001301 ORTHO05D001169 1.2e-08 63.5 124 40.3
Sc17g0006290 Simmondsia chinensis HOM05D001301 ORTHO05D001169 1.5e-08 63.2 129 39.5
CSS0039707 Camellia sinensis var. sinensis HOM05D001301 ORTHO05D001169 2.6e-08 62.4 128 40.6
Gohir.A06G210000 Gossypium hirsutum HOM05D001301 ORTHO05D001169 2.6e-08 62.4 123 36.6
HanXRQChr15g0482501 Helianthus annuus HOM05D001301 ORTHO05D001169 3.4e-08 62.0 126 38.1
Nn1g04014 Nelumbo nucifera HOM05D001301 ORTHO05D001169 3.4e-08 62.0 74 45.9
CSS0031465 Camellia sinensis var. sinensis HOM05D001301 ORTHO05D001169 4.4e-08 61.6 101 39.6
Lj1A1207G80 Lonicera japonica HOM05D001301 ORTHO05D001169 1.7e-07 59.7 147 36.7
Hma1.2p1_0881F.1_g231950 Hydrangea macrophylla HOM05D001301 ORTHO05D001169 2.9e-07 58.9 144 36.8
Dinv07535 Davidia involucrata HOM05D001301 ORTHO05D001169 4.9e-07 58.2 113 41.6
Dinv40536 Davidia involucrata HOM05D001301 ORTHO05D001169 4.9e-07 58.2 80 43.8
Oeu014700.1 Olea europaea HOM05D001301 ORTHO05D001169 4.9e-07 58.2 136 33.1
Oeu014701.1 Olea europaea HOM05D001301 ORTHO05D001169 4.9e-07 58.2 136 33.1
Lsat_1_v5_gn_7_19041 Lactuca sativa HOM05D001301 ORTHO05D001169 6.4e-07 57.8 139 35.3
HanXRQChr16g0511241 Helianthus annuus HOM05D001301 ORTHO05D001169 8.3e-07 57.4 76 40.8
Manes.16G046200 Manihot esculenta HOM05D001301 ORTHO05D001169 1.1e-06 57.0 148 31.1
Lalb_Chr20g0121991 Lupinus albus HOM05D001301 ORTHO05D001169 1.4e-06 56.6 120 35.8
Cc02_g13050 Coffea canephora HOM05D001301 ORTHO05D001169 2.4e-06 55.8 139 33.1
Oeu043700.2 Olea europaea HOM05D001301 ORTHO05D001169 2.4e-06 55.8 131 33.6
ECA236G1624 Erigeron canadensis HOM05D001301 ORTHO05D001169 3.2e-06 55.5 131 36.6
HanXRQChr17g0560321 Helianthus annuus HOM05D001301 ORTHO05D001169 3.2e-06 55.5 81 39.5
PSO541G3503 Papaver somniferum HOM05D001301 ORTHO05D001169 3.2e-06 55.5 127 35.4
PSO675G6697 Papaver somniferum HOM05D001301 ORTHO05D001169 4.1e-06 55.1 80 45.0
RhsimUnG0044400 Rhododendron simsii HOM05D001301 ORTHO05D001169 5.4e-06 54.7 130 35.4
TAR624G1045 Trochodendron aralioides HOM05D001301 ORTHO05D001169 7.1e-06 54.3 73 42.5
AT2G20760 Arabidopsis thaliana HOM05D001301 ORTHO05D001169 9.2e-06 53.9 121 33.1
ECA234G0869 Erigeron canadensis HOM05D001301 ORTHO05D001169 9.2e-06 53.9 65 43.1


User provided reference genes

Program Settings