Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.W2DQVT Arachis hypogaea HOM05D003929 ORTHO05D004499 5.5e-266 920.6 538 100.0
Glyma.17G089700 Glycine max HOM05D003929 ORTHO05D004499 6.9e-160 568.2 541 63.6
Glyma.05G037400 Glycine max HOM05D003929 ORTHO05D004499 1.8e-155 553.5 545 59.8
VMungo1215G1851 Vigna mungo HOM05D003929 ORTHO05D004499 1.6e-148 530.4 543 61.0
Lalb_Chr13g0297821 Lupinus albus HOM05D003929 ORTHO05D004499 1.0e-147 527.7 566 58.1
Lj4g0023186 Lotus japonicus HOM05D003929 ORTHO05D004499 9.7e-146 521.2 570 61.6
TPR.G37553 Trifolium pratense HOM05D003929 ORTHO05D004499 2.8e-145 519.6 564 56.7
Phvul.003G200200 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 1.8e-144 516.9 550 58.7
Medtr4g106880 Medicago truncatula HOM05D003929 ORTHO05D004499 1.1e-141 507.7 575 59.8
Lalb_Chr07g0182721 Lupinus albus HOM05D003929 ORTHO05D004499 6.8e-131 471.9 541 54.2
Ca_21916_v3 Cicer arietinum L. HOM05D003929 ORTHO05D004499 1.6e-127 460.7 540 57.2
Glyma.06G182600 Glycine max HOM05D003929 ORTHO05D004499 2.2e-126 456.8 558 52.5
VMungo1309G0717 Vigna mungo HOM05D003929 ORTHO05D004499 1.3e-118 431.0 548 50.0
Phvul.009G178800 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 1.5e-117 427.6 563 50.6
arahy.Tifrunner.gnm1.ann1.S02CG0 Arachis hypogaea HOM05D003929 ORTHO05D004499 1.9e-117 427.2 566 48.6
arahy.Tifrunner.gnm1.ann1.R24CC5 Arachis hypogaea HOM05D003929 ORTHO05D004499 1.8e-115 420.6 571 48.9
CiPaw.11G026500 Carya illinoinensis HOM05D003929 ORTHO05D004499 3.4e-114 416.4 559 49.2
Dinv20657 Davidia involucrata HOM05D003929 ORTHO05D004499 3.4e-114 416.4 573 50.6
Prupe.5G174100 Prunus persica HOM05D003929 ORTHO05D004499 9.8e-114 414.8 562 49.1
Potri.012G080800 Populus trichocarpa HOM05D003929 ORTHO05D004499 1.8e-112 410.6 564 48.4
Atru.chr9.2475 Acer truncatum HOM05D003929 ORTHO05D004499 1.2e-111 407.9 556 48.0
Cfa019114 Carpinus fangiana HOM05D003929 ORTHO05D004499 1.7e-110 404.1 587 47.9
Cpa.g.sc770.1 Carica papaya HOM05D003929 ORTHO05D004499 1.9e-109 400.6 557 48.8
arahy.Tifrunner.gnm1.ann1.49JIZL Arachis hypogaea HOM05D003929 ORTHO05D004499 2.1e-108 397.1 244 85.7
QL10p011722 Quercus lobata HOM05D003929 ORTHO05D004499 2.1e-108 397.1 574 48.3
Duzib205G0135 Durio zibethinus HOM05D003929 ORTHO05D004499 4.7e-108 396.0 558 49.6
Potri.015G076100 Populus trichocarpa HOM05D003929 ORTHO05D004499 4.7e-108 396.0 560 47.9
Dinv02898 Davidia involucrata HOM05D003929 ORTHO05D004499 1.4e-107 394.4 567 51.0
FAN08G2589 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.8e-107 394.0 540 48.1
FAN13G1321 Fragaria x ananassa HOM05D003929 ORTHO05D004499 3.1e-107 393.3 544 48.2
Lj1g0005514 Lotus japonicus HOM05D003929 ORTHO05D004499 1.5e-106 391.0 555 49.0
CiPaw.12G026400 Carya illinoinensis HOM05D003929 ORTHO05D004499 3.4e-106 389.8 561 48.0
Thecc.03G012300 Theobroma cacao HOM05D003929 ORTHO05D004499 5.8e-106 389.0 568 50.2
TWI14G0242 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 5.8e-106 389.0 550 46.9
FAN04G3176 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.3e-105 387.9 560 47.0
Manes.06G104600 Manihot esculenta HOM05D003929 ORTHO05D004499 1.3e-105 387.9 529 52.7
FvH4_5g05290 Fragaria vesca HOM05D003929 ORTHO05D004499 1.4e-104 384.4 561 46.7
FAN18G3765 Fragaria x ananassa HOM05D003929 ORTHO05D004499 2.4e-104 383.6 561 46.7
RcHm_v2.0_Chr7g0193581 Rosa chinensis HOM05D003929 ORTHO05D004499 2.4e-104 383.6 561 46.9
GSVIVG01007750001 Vitis vinifera HOM05D003929 ORTHO05D004499 1.6e-103 380.9 565 47.6
FAN18G3294 Fragaria x ananassa HOM05D003929 ORTHO05D004499 2.0e-103 380.6 561 45.5
CANSAT80G0843 Cannabis sativa HOM05D003929 ORTHO05D004499 2.7e-103 380.2 566 50.0
Manes.14G066000 Manihot esculenta HOM05D003929 ORTHO05D004499 4.6e-103 379.4 556 51.8
TAR374G1605 Trochodendron aralioides HOM05D003929 ORTHO05D004499 5.0e-102 375.9 551 51.0
Hma1.2p1_0176F.1_g077430 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 1.5e-101 374.4 565 46.9
Rhsim08G0171800 Rhododendron simsii HOM05D003929 ORTHO05D004499 1.9e-101 374.0 501 53.3
Haze_07467 Corylus avellana HOM05D003929 ORTHO05D004499 2.5e-101 373.6 652 42.3
Eucgr.B00317 Eucalyptus grandis HOM05D003929 ORTHO05D004499 2.5e-101 373.6 555 46.5
Duzib068G1333 Durio zibethinus HOM05D003929 ORTHO05D004499 3.3e-101 373.2 548 48.0
TWI39G0937 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 4.7e-100 369.4 545 46.2
SalBow5G2324 Salvia bowleyana HOM05D003929 ORTHO05D004499 8.1e-100 368.6 530 46.8
CSS0017959 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 1.1e-99 368.2 520 51.0
MD14G1180600 Malus domestica HOM05D003929 ORTHO05D004499 8.9e-99 365.2 523 45.9
MSTRG.11449 Avicennia marina HOM05D003929 ORTHO05D004499 1.2e-98 364.8 560 48.9
Gohir.A12G274000 Gossypium hirsutum HOM05D003929 ORTHO05D004499 1.2e-98 364.8 570 47.2
Gorai.008G295200 Gossypium raimondii HOM05D003929 ORTHO05D004499 2.6e-98 363.6 567 47.6
Psat4g057880 Pisum sativum HOM05D003929 ORTHO05D004499 2.6e-98 363.6 380 56.1
Nitab4.5_0001017g0080 Nicotiana tabacum HOM05D003929 ORTHO05D004499 3.4e-98 363.2 548 46.5
PGSC0003DMG400027090 Solanum tuberosum HOM05D003929 ORTHO05D004499 5.8e-98 362.5 553 47.2
PGR083G1389 Punica granatum HOM05D003929 ORTHO05D004499 7.5e-98 362.1 561 46.7
Gohir.D12G274700 Gossypium hirsutum HOM05D003929 ORTHO05D004499 9.8e-98 361.7 559 47.4
Solyc06g071470.4 Solanum lycopersicum HOM05D003929 ORTHO05D004499 3.7e-97 359.8 558 46.4
Lalb_Chr11g0071231 Lupinus albus HOM05D003929 ORTHO05D004499 4.9e-97 359.4 561 45.6
Sopen06g027750 Solanum pennellii HOM05D003929 ORTHO05D004499 6.4e-97 359.0 551 47.2
TWI31G0970 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 8.3e-97 358.6 543 46.2
TAR622G0564 Trochodendron aralioides HOM05D003929 ORTHO05D004499 1.1e-96 358.2 541 47.1
Lj5C124G9 Lonicera japonica HOM05D003929 ORTHO05D004499 1.9e-96 357.5 556 49.5
Hma1.2p1_0000F.1_g000890 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 9.2e-96 355.1 515 46.6
CAN.G628.79 Capsicum annuum HOM05D003929 ORTHO05D004499 2.7e-95 353.6 543 46.6
Oeu016382.1 Olea europaea HOM05D003929 ORTHO05D004499 2.7e-95 353.6 570 45.6
DCAR_026132 Daucus carota HOM05D003929 ORTHO05D004499 8.6e-94 348.6 564 45.6
ECA232G3264 Erigeron canadensis HOM05D003929 ORTHO05D004499 8.6e-94 348.6 563 45.3
Nn1g01975 Nelumbo nucifera HOM05D003929 ORTHO05D004499 4.3e-93 346.3 523 48.0
MD06G1174100 Malus domestica HOM05D003929 ORTHO05D004499 1.2e-92 344.7 523 46.3
PGR044G0511 Punica granatum HOM05D003929 ORTHO05D004499 2.0e-90 337.4 524 44.5
ClCG06G017000 Citrullus lanatus HOM05D003929 ORTHO05D004499 1.7e-89 334.3 557 47.0
vmacro19383 Vaccinium macrocarpon HOM05D003929 ORTHO05D004499 1.7e-89 334.3 538 42.2
Peaxi162Scf00017g02914 Petunia axillaris HOM05D003929 ORTHO05D004499 2.2e-89 334.0 549 43.5
CsaV3_1G001520 Cucumis sativus L. HOM05D003929 ORTHO05D004499 3.9e-86 323.2 558 47.5
PSO832G4520 Papaver somniferum HOM05D003929 ORTHO05D004499 3.9e-86 323.2 536 43.8
Lsat_1_v5_gn_4_75281 Lactuca sativa HOM05D003929 ORTHO05D004499 5.1e-86 322.8 563 44.9
CAN.G781.12 Capsicum annuum HOM05D003929 ORTHO05D004499 6.6e-86 322.4 540 42.0
HanXRQChr16g0504021 Helianthus annuus HOM05D003929 ORTHO05D004499 1.1e-85 321.6 567 43.6
Sed0022246 Sechium edule HOM05D003929 ORTHO05D004499 1.1e-85 321.6 569 44.1
MELO3C026291.2 Cucumis melo HOM05D003929 ORTHO05D004499 3.6e-84 316.6 563 46.4
Cc04_g14000 Coffea canephora HOM05D003929 ORTHO05D004499 8.1e-84 315.5 555 42.5
SalBow5G2758 Salvia bowleyana HOM05D003929 ORTHO05D004499 1.1e-83 315.1 547 40.6
MBI10_g41915_MAGBIO Magnolia biondii HOM05D003929 ORTHO05D004499 1.4e-83 314.7 544 44.3
Peaxi162Scf00689g00222 Petunia axillaris HOM05D003929 ORTHO05D004499 1.8e-83 314.3 546 41.4
Nitab4.5_0009783g0030 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.2e-82 311.6 533 40.3
THA.LOC104821459 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 2.6e-82 310.5 539 44.3
Aa31LG11G880 Aethionema arabicum HOM05D003929 ORTHO05D004499 9.9e-82 308.5 561 41.2
PSO063G6021 Papaver somniferum HOM05D003929 ORTHO05D004499 3.8e-81 306.6 559 42.4
Ciclev10024320m.g Citrus clementina HOM05D003929 ORTHO05D004499 8.4e-81 305.4 448 52.2
BraA06t25903Z Brassica rapa HOM05D003929 ORTHO05D004499 2.1e-79 300.8 512 41.0
Nitab4.5_0007719g0020 Nicotiana tabacum HOM05D003929 ORTHO05D004499 2.1e-79 300.8 551 39.4
Hund09434 Selenicereus undatus HOM05D003929 ORTHO05D004499 3.5e-79 300.1 564 42.6
A06p29570 Brassica napus HOM05D003929 ORTHO05D004499 1.7e-78 297.7 512 40.6
Aqoxy3G02955 Aquilegia oxysepala HOM05D003929 ORTHO05D004499 3.0e-78 297.0 551 41.6
BolC3t18647H Brassica oleracea HOM05D003929 ORTHO05D004499 1.9e-77 294.3 528 40.5
Thhalv10004017m.g Eutrema salsugineum HOM05D003929 ORTHO05D004499 3.3e-77 293.5 541 39.7
AL8G39770 Arabidopsis lyrata HOM05D003929 ORTHO05D004499 5.6e-77 292.7 539 39.3
BcaC01g02523 Brassica carinata HOM05D003929 ORTHO05D004499 7.3e-77 292.4 528 40.3
C03p63930 Brassica napus HOM05D003929 ORTHO05D004499 7.3e-77 292.4 528 40.3
Ah.11g051630 Amaranthus hybridus HOM05D003618 ORTHO05D004302 1.6e-76 291.2 573 38.9
Carub.0008s2353 Capsella rubella HOM05D003929 ORTHO05D004499 8.1e-76 288.9 541 39.6
Migut.I00015 Erythranthe guttata HOM05D003929 ORTHO05D004499 1.1e-75 288.5 536 42.7
Sp2g25960 Schrenkiella parvula HOM05D003929 ORTHO05D004499 1.1e-75 288.5 552 39.7
EL10Ac5g10751 Beta vulgaris HOM05D003929 ORTHO05D004499 3.1e-75 287.0 570 41.2
COL.COLO4_30035 Corchorus olitorius HOM05D003929 ORTHO05D004499 4.0e-75 286.6 568 40.0
BcaB02g09694 Brassica carinata HOM05D003929 ORTHO05D004499 2.0e-74 284.3 512 40.8
THA.LOC104818232 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 2.6e-74 283.9 549 41.3
BolC9t53798H Brassica oleracea HOM05D003929 ORTHO05D004499 7.6e-74 282.3 527 40.6
C09p08860 Brassica napus HOM05D003929 ORTHO05D004499 2.2e-73 280.8 527 40.4
AT5G62810 Arabidopsis thaliana HOM05D003929 ORTHO05D004499 2.9e-73 280.4 557 38.6
BraA09t36437Z Brassica rapa HOM05D003929 ORTHO05D004499 6.4e-73 279.3 515 40.4
BcaC04g23392 Brassica carinata HOM05D003929 ORTHO05D004499 8.4e-73 278.9 527 40.2
CARHR276590 Cardamine hirsuta HOM05D003929 ORTHO05D004499 2.4e-72 277.3 553 39.4
A09p07860 Brassica napus HOM05D003929 ORTHO05D004499 9.3e-72 275.4 536 40.1
Nitab4.5_0000003g0590 Nicotiana tabacum HOM05D003929 ORTHO05D004499 3.0e-70 270.4 560 37.9
Actinidia33066 Actinidia chinensis HOM05D003929 ORTHO05D004499 1.8e-67 261.2 489 49.7
Solyc03g114330.3 Solanum lycopersicum HOM05D003929 ORTHO05D004499 1.2e-66 258.5 519 38.9
Sc04g0001820 Simmondsia chinensis HOM05D003929 ORTHO05D004499 2.4e-64 250.8 377 47.7
Sed0009068 Sechium edule HOM05D003929 ORTHO05D004499 7.1e-64 249.2 382 47.9
SGA_v2.0_scaffold90G27941 Striga asiatica HOM05D003929 ORTHO05D004499 7.1e-64 249.2 583 37.4
AUR62030967 Chenopodium quinoa HOM05D003929 ORTHO05D004499 9.6e-61 238.8 548 41.2
Actinidia19318 Actinidia chinensis HOM05D003929 ORTHO05D004499 9.0e-59 232.3 450 40.4
Psat4g209200 Pisum sativum HOM05D003929 ORTHO05D004499 1.5e-58 231.5 343 45.8
Migut.D01928 Erythranthe guttata HOM05D003929 ORTHO05D004499 5.8e-58 229.6 518 38.8
Oeu024692.2 Olea europaea HOM05D003929 ORTHO05D004499 7.9e-55 219.2 255 63.1
CSS0023375 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 1.9e-53 214.5 246 61.8
HPP92_021833 Vanilla planifolia HOM05D003929 ORTHO05D004499 7.4e-53 212.6 384 42.7
AUR62008214 Chenopodium quinoa HOM05D003929 ORTHO05D004499 6.3e-52 209.5 526 35.2
Sopen03g033430 Solanum pennellii HOM05D003929 ORTHO05D004499 1.1e-51 208.8 520 35.6
CDE11G0983 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 1.2e-50 205.3 523 35.8
CDE05G2632 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 2.0e-50 204.5 531 35.4
SEGI_11105 Sequoiadendron giganteum HOM05D003929 ORTHO05D004499 4.5e-50 203.4 581 35.6
ATR0730G040 Amborella trichopoda HOM05D003929 ORTHO05D004499 2.9e-49 200.7 595 33.8
Atru.chr11.2035 Acer truncatum HOM05D003929 ORTHO05D004499 9.7e-45 185.7 464 34.3
Zm00001eb356320 Zea mays HOM05D003929 ORTHO05D004499 1.7e-41 174.9 482 32.0
Oeu022163.1 Olea europaea HOM05D003929 ORTHO05D004499 4.2e-40 170.2 313 37.7
Zm00001eb267680 Zea mays HOM05D003929 ORTHO05D004499 1.4e-38 165.2 505 30.5
Lj9A449T48 Lonicera japonica HOM05D003929 ORTHO05D004499 3.0e-38 164.1 230 46.5
unitig_749.g13474 Utricularia gibba HOM05D003929 ORTHO05D004499 1.3e-33 148.7 426 28.2
FAN24G3310 Fragaria x ananassa HOM05D003929 ORTHO05D004499 6.5e-33 146.4 306 35.0
Thecc.02G250700 Theobroma cacao HOM05D003929 ORTHO05D004499 6.5e-33 146.4 426 32.4
Gohir.D02G162200 Gossypium hirsutum HOM05D003929 ORTHO05D004499 5.5e-32 143.3 422 32.5
COL.COLO4_24172 Corchorus olitorius HOM05D003929 ORTHO05D004499 1.2e-31 142.1 408 31.1
Mapoly0102s0017 Marchantia polymorpha HOM05D003929 ORTHO05D004499 1.4e-30 138.7 517 29.8
Cfa019127 Carpinus fangiana HOM05D003929 ORTHO05D004499 2.3e-30 137.9 171 50.3
Gorai.005G182200 Gossypium raimondii HOM05D003929 ORTHO05D004499 3.0e-30 137.5 410 32.4
Os05g0101200 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 2.6e-29 134.4 543 28.4
Gohir.A03G139300 Gossypium hirsutum HOM05D003929 ORTHO05D004499 1.3e-28 132.1 429 31.0
PGR044G1312 Punica granatum HOM05D003929 ORTHO05D004499 5.9e-26 123.2 188 43.1
Os01g0107000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 2.2e-25 121.3 194 42.3
PSO135G0191 Papaver somniferum HOM05D003929 ORTHO05D004499 2.2e-25 121.3 155 51.6
Pp3c9_20380 Physcomitrium patens HOM05D003929 ORTHO05D004499 3.2e-24 117.5 181 41.4
CBR_g3508 Chara braunii HOM05D003929 ORTHO05D004499 9.4e-24 115.9 230 39.1
AagrBONN_evm.TU.Sc2ySwM_117.2261 Anthoceros agrestis HOM05D003929 ORTHO05D004499 1.2e-23 115.5 145 43.4
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 3.6e-23 114.0 233 42.5
Hund02741 Selenicereus undatus HOM05D003929 ORTHO05D004499 3.6e-23 114.0 465 29.0
Zm00001eb126680 Zea mays HOM05D003929 ORTHO05D004499 8.0e-23 112.8 456 29.6
Pp3c15_21860 Physcomitrium patens HOM05D003929 ORTHO05D004499 2.0e-21 108.2 177 37.3
SHI17030 Sapria himalayana HOM05D003929 ORTHO05D004499 1.3e-17 95.5 76 65.8
Lj9A449G50 Lonicera japonica HOM05D003929 ORTHO05D004499 5.2e-14 83.6 82 57.3
CBR_g10793 Chara braunii HOM05D027206 ORTHO05D004499 9.8e-13 79.3 82 54.9
Cre10.g454025 Chlamydomonas reinhardtii HOM05D003929 ORTHO05D004499 7.0e-11 73.2 89 55.1
ClCG01G013120 Citrullus lanatus HOM05D003929 ORTHO05D004499 3.5e-10 70.9 64 53.1
Os05g0578000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 2.9e-09 67.8 77 53.2
SHI17029 Sapria himalayana HOM05D003929 ORTHO05D004499 1.5e-08 65.5 64 50.0
MCO04G191 Micromonas commoda HOM05D003929 ORTHO05D004499 7.2e-08 63.2 51 56.9
Zm00001eb296750 Zea mays HOM05D003929 ORTHO05D004499 8.0e-07 59.7 115 40.0
Nitab4.5_0000866g0190 Nicotiana tabacum HOM05D003929 ORTHO05D004499 3.0e-06 57.8 121 33.1
PGSC0003DMG400024502 Solanum tuberosum HOM05D003929 ORTHO05D004499 3.0e-06 57.8 107 39.3


User provided reference genes

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