Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.W10PR0 Arachis hypogaea HOM05D009025 ORTHO05D011227 2.3e-282 974.9 511 100.0
arahy.Tifrunner.gnm1.ann1.FQL4BN Arachis hypogaea HOM05D009025 ORTHO05D011227 4.3e-236 821.2 511 87.9
Lalb_Chr20g0119741 Lupinus albus HOM05D009025 ORTHO05D011227 3.2e-98 363.2 386 57.8
Phvul.006G134300 Phaseolus vulgaris HOM05D009025 ORTHO05D011227 1.8e-96 357.5 396 57.1
Glyma.15G123700 Glycine max HOM05D009025 ORTHO05D011227 3.0e-96 356.7 392 58.2
Lj6g0011463 Lotus japonicus HOM05D009025 ORTHO05D011227 8.5e-91 338.6 398 53.8
VMungo0540G2122 Vigna mungo HOM05D009025 ORTHO05D011227 7.4e-87 325.5 391 53.5
Glyma.09G017800 Glycine max HOM05D009025 ORTHO05D011227 2.4e-85 320.5 400 52.8
Medtr2g028180 Medicago truncatula HOM05D009025 ORTHO05D011227 2.2e-78 297.4 382 51.8
TPR.G10502 Trifolium pratense HOM05D009025 ORTHO05D011227 1.5e-71 274.6 384 49.7
Ca_00784_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 2.1e-57 227.6 377 44.6
Ca_11375_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 2.1e-57 227.6 377 44.6
Psat1g171120 Pisum sativum HOM05D009025 ORTHO05D011227 1.8e-53 214.5 376 43.4
QL05p066158 Quercus lobata HOM05D009025 ORTHO05D011227 2.7e-52 210.7 393 41.7
TAR626G0549 Trochodendron aralioides HOM05D009025 ORTHO05D011227 1.4e-45 188.3 403 38.2
Potri.016G000700 Populus trichocarpa HOM05D009025 ORTHO05D011227 4.7e-41 173.3 400 34.2
CiPaw.10G085100 Carya illinoinensis HOM05D009025 ORTHO05D011227 2.3e-40 171.0 423 34.8
CiPaw.09G113300 Carya illinoinensis HOM05D009025 ORTHO05D011227 7.8e-36 156.0 415 35.9
Nn1g07628 Nelumbo nucifera HOM05D009025 ORTHO05D011227 7.3e-34 149.4 405 33.1
Oeu016927.1 Olea europaea HOM05D009025 ORTHO05D011227 1.1e-29 135.6 377 33.2
CSS0008017 Camellia sinensis var. sinensis HOM05D009025 ORTHO05D011227 5.6e-26 123.2 376 31.9
Oeu017916.1 Olea europaea HOM05D009025 ORTHO05D011227 9.9e-23 112.5 372 31.7
Ciclev10015726m.g Citrus clementina HOM05D009025 ORTHO05D011227 4.9e-22 110.2 397 28.5
Rhsim13G0137900 Rhododendron simsii HOM05D009025 ORTHO05D011227 4.9e-22 110.2 396 29.5
DCAR_019912 Daucus carota HOM05D009025 ORTHO05D011227 1.6e-20 105.1 394 29.7
Aqoxy2G01997 Aquilegia oxysepala HOM05D009025 ORTHO05D011227 9.6e-18 95.9 428 26.4
Lj2C12T17 Lonicera japonica HOM05D009025 ORTHO05D011227 1.6e-17 95.1 412 30.1
Migut.M01483 Erythranthe guttata HOM05D009025 ORTHO05D011227 1.5e-15 88.6 405 27.4
ATR0751G165 Amborella trichopoda HOM05D009025 ORTHO05D011227 2.4e-13 81.3 396 28.3
Eucgr.E04236 Eucalyptus grandis HOM05D009025 ORTHO05D011227 2.4e-13 81.3 146 37.0
Haze_07066 Corylus avellana HOM05D009025 ORTHO05D011227 3.1e-08 64.3 143 36.4
SalBow8G5084 Salvia bowleyana HOM05D009025 ORTHO05D011227 3.8e-06 57.4 100 40.0


User provided reference genes

Program Settings