Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.VYW2HA Arachis hypogaea HOM05D000163 ORTHO05D009543 4.7e-121 438.0 236 100.0
arahy.Tifrunner.gnm1.ann1.L5PHVW Arachis hypogaea HOM05D000163 ORTHO05D009543 9.0e-80 300.8 207 83.1
arahy.Tifrunner.gnm1.ann1.NT97EM Arachis hypogaea HOM05D000163 ORTHO05D009543 9.0e-80 300.8 207 83.1
Glyma.13G335700 Glycine max HOM05D000163 ORTHO05D009543 4.1e-40 169.1 259 45.2
Glyma.15G038600 Glycine max HOM05D000163 ORTHO05D009543 7.7e-39 164.9 257 45.5
Lj3g0018131 Lotus japonicus HOM05D000163 ORTHO05D009543 2.1e-36 156.8 258 45.3
Lalb_Chr01g0003671 Lupinus albus HOM05D000163 ORTHO05D009543 2.3e-35 153.3 249 45.4
Psat5g284440 Pisum sativum HOM05D000163 ORTHO05D009543 3.0e-35 152.9 259 45.2
Ca_01330_v3 Cicer arietinum L. HOM05D000163 ORTHO05D009543 6.8e-35 151.8 258 44.6
Glyma.11G139700 Glycine max HOM05D000163 ORTHO05D009543 2.0e-34 150.2 246 45.1
Lalb_Chr24g0394171 Lupinus albus HOM05D000163 ORTHO05D009543 2.6e-34 149.8 209 50.2
Medtr2g096850 Medicago truncatula HOM05D000163 ORTHO05D009543 3.4e-34 149.4 285 42.1
VMungo1080G0546 Vigna mungo HOM05D000163 ORTHO05D009543 2.4e-32 143.3 259 42.9
TPR.G34296 Trifolium pratense HOM05D000163 ORTHO05D009543 2.7e-31 139.8 285 39.6
Phvul.011G064400 Phaseolus vulgaris HOM05D000163 ORTHO05D009543 3.5e-31 139.4 247 42.1
Phvul.L005143 Phaseolus vulgaris HOM05D000163 ORTHO05D009543 4.6e-31 139.0 259 40.9
VMungo1127G1629 Vigna mungo HOM05D000163 ORTHO05D009543 3.1e-27 126.3 235 42.1
MD11G1110200 Malus domestica HOM05D000163 ORTHO05D009543 1.6e-23 114.0 250 37.2
Dinv12416 Davidia involucrata HOM05D000163 ORTHO05D009543 2.0e-23 113.6 272 37.5
MD03G1095200 Malus domestica HOM05D000163 ORTHO05D009543 5.0e-22 109.0 247 37.7
Dinv16993 Davidia involucrata HOM05D000163 ORTHO05D009543 5.6e-21 105.5 257 36.2
Dinv42942 Davidia involucrata HOM05D000163 ORTHO05D009543 5.6e-21 105.5 257 36.2
Dinv43158 Davidia involucrata HOM05D000163 ORTHO05D009543 5.6e-21 105.5 257 36.2
PGR102G0397 Punica granatum HOM05D000163 ORTHO05D009543 1.2e-20 104.4 252 36.1
QL01p032213 Quercus lobata HOM05D000163 ORTHO05D009543 1.2e-20 104.4 266 35.0
CiPaw.13G095200 Carya illinoinensis HOM05D000163 ORTHO05D009543 1.6e-20 104.0 266 35.3
vmacro03077 Vaccinium macrocarpon HOM05D000163 ORTHO05D009543 1.6e-20 104.0 243 35.4
Cfa011494 Carpinus fangiana HOM05D000163 ORTHO05D009543 2.1e-20 103.6 263 35.0
Lj1C154G8 Lonicera japonica HOM05D000163 ORTHO05D009543 2.1e-20 103.6 235 37.9
Potri.001G239100 Populus trichocarpa HOM05D000163 ORTHO05D009543 2.8e-20 103.2 202 39.1
Nn5g26924 Nelumbo nucifera HOM05D000163 ORTHO05D009543 1.8e-19 100.5 216 36.6
FAN21G2907 Fragaria x ananassa HOM05D000163 ORTHO05D009543 1.5e-18 97.4 261 34.9
FAN25G3816 Fragaria x ananassa HOM05D000163 ORTHO05D009543 3.4e-18 96.3 260 34.6
GSVIVG01024979001 Vitis vinifera HOM05D000163 ORTHO05D009543 5.8e-18 95.5 256 35.5
CSS0046597 Camellia sinensis var. sinensis HOM05D000163 ORTHO05D009543 1.3e-17 94.4 269 33.5
Ciclev10027788m.g Citrus clementina HOM05D000163 ORTHO05D009543 1.7e-17 94.0 262 32.8
TWI75G0507 Tripterygium wilfordii HOM05D000163 ORTHO05D009543 2.9e-17 93.2 264 33.3
FvH4_3g35970 Fragaria vesca HOM05D000163 ORTHO05D009543 4.9e-17 92.4 278 33.5
Hma1.2p1_0418F.1_g149040 Hydrangea macrophylla HOM05D000163 ORTHO05D009543 6.4e-17 92.0 251 37.5
TAR633G1038 Trochodendron aralioides HOM05D000163 ORTHO05D009543 8.3e-17 91.7 273 31.5
Atru.chr3.3894 Acer truncatum HOM05D000163 ORTHO05D009543 3.2e-16 89.7 255 30.6
Nn2g10377 Nelumbo nucifera HOM05D000163 ORTHO05D009543 4.1e-16 89.4 256 32.4
Potri.009G030400 Populus trichocarpa HOM05D000163 ORTHO05D009543 4.1e-16 89.4 270 31.1
RcHm_v2.0_Chr5g0064331 Rosa chinensis HOM05D000163 ORTHO05D009543 4.1e-16 89.4 261 33.7
Oeu054150.1 Olea europaea HOM05D000163 ORTHO05D009543 7.1e-16 88.6 245 31.8
Actinidia37207 Actinidia chinensis HOM05D000163 ORTHO05D009543 9.2e-16 88.2 259 35.1
Cc01_g12780 Coffea canephora HOM05D000163 ORTHO05D009543 2.1e-15 87.0 272 30.9
Duzib168G1870 Durio zibethinus HOM05D000163 ORTHO05D009543 3.5e-15 86.3 273 31.5
Lsat_1_v5_gn_8_75741 Lactuca sativa HOM05D000163 ORTHO05D009543 4.6e-15 85.9 203 35.5
Gohir.D13G233200 Gossypium hirsutum HOM05D000163 ORTHO05D009543 6.0e-15 85.5 261 33.0
Manes.11G131100 Manihot esculenta HOM05D000163 ORTHO05D009543 6.0e-15 85.5 269 31.6
CAN.G327.14 Capsicum annuum HOM05D000163 ORTHO05D009543 7.8e-15 85.1 265 32.5
HanXRQChr06g0178701 Helianthus annuus HOM05D000163 ORTHO05D009543 7.8e-15 85.1 227 35.7
COL.COLO4_18504 Corchorus olitorius HOM05D000163 ORTHO05D009543 1.3e-14 84.3 266 32.3
EL10Ac7g16011 Beta vulgaris HOM05D000163 ORTHO05D009543 5.1e-14 82.4 265 30.2
Hund04966 Selenicereus undatus HOM05D000163 ORTHO05D009543 5.1e-14 82.4 266 30.1
Sopen11g025690 Solanum pennellii HOM05D000163 ORTHO05D009543 5.1e-14 82.4 266 30.1
Thecc.09G322600 Theobroma cacao HOM05D000163 ORTHO05D009543 5.1e-14 82.4 271 32.8
Gohir.A13G227600 Gossypium hirsutum HOM05D000163 ORTHO05D009543 6.6e-14 82.0 265 31.7
Rhsim13G0083200 Rhododendron simsii HOM05D000163 ORTHO05D009543 6.6e-14 82.0 237 33.8
PSO339G2816 Papaver somniferum HOM05D000163 ORTHO05D009543 2.5e-13 80.1 230 30.4
THA.LOC104826331 Tarenaya hassleriana HOM05D000163 ORTHO05D009543 3.3e-13 79.7 258 29.5
ECA236G0772 Erigeron canadensis HOM05D000163 ORTHO05D009543 7.3e-13 78.6 229 31.4
Gorai.013G264000 Gossypium raimondii HOM05D000163 ORTHO05D009543 7.3e-13 78.6 261 31.8
PSO384G1895 Papaver somniferum HOM05D000163 ORTHO05D009543 9.5e-13 78.2 230 30.0
CANSAT54G0354 Cannabis sativa HOM05D000163 ORTHO05D009543 1.6e-12 77.4 266 28.9
AUR62001794 Chenopodium quinoa HOM05D000163 ORTHO05D009543 3.6e-12 76.3 257 28.0
Peaxi162Scf00832g00022 Petunia axillaris HOM05D000163 ORTHO05D009543 4.7e-12 75.9 270 30.0
SGA_v2.0_scaffold230G43403 Striga asiatica HOM05D000163 ORTHO05D009543 8.9e-11 71.6 181 34.8
Migut.D02107 Erythranthe guttata HOM05D000163 ORTHO05D009543 1.2e-10 71.2 203 33.5
Manes.04G034500 Manihot esculenta HOM05D000163 ORTHO05D009543 1.2e-10 71.2 266 29.7
Prupe.6G078700 Prunus persica HOM05D000163 ORTHO05D009543 2.0e-10 70.5 160 40.0
Sc21g0005750 Simmondsia chinensis HOM05D000163 ORTHO05D009543 7.6e-10 68.6 268 28.4
Aa31sc281G40 Aethionema arabicum HOM05D000163 ORTHO05D009543 9.9e-10 68.2 252 30.6
Nitab4.5_0006994g0010 Nicotiana tabacum HOM05D000163 ORTHO05D009543 9.9e-10 68.2 264 31.1
Actinidia07040 Actinidia chinensis HOM05D000163 ORTHO05D009543 1.3e-09 67.8 260 31.5
AUR62009582 Chenopodium quinoa HOM05D000163 ORTHO05D009543 2.2e-09 67.0 264 27.7
Aqoxy4G02915 Aquilegia oxysepala HOM05D000163 ORTHO05D009543 2.9e-09 66.6 282 29.1
CsaV3_6G016890 Cucumis sativus L. HOM05D000163 ORTHO05D009543 2.9e-09 66.6 100 40.0
TAR636G0213 Trochodendron aralioides HOM05D000163 ORTHO05D009543 2.9e-09 66.6 115 41.7
TAR688G0003 Trochodendron aralioides HOM05D000163 ORTHO05D009543 2.9e-09 66.6 115 41.7
MBI14_g37826_MAGBIO Magnolia biondii HOM05D000163 ORTHO05D009543 3.7e-09 66.2 292 27.7
MSTRG.21198 Avicennia marina HOM05D000163 ORTHO05D009543 6.4e-09 65.5 245 30.2
Haze_24082 Corylus avellana HOM05D000163 ORTHO05D009543 8.4e-09 65.1 185 34.6
Solyc11g065950.3 Solanum lycopersicum HOM05D000163 ORTHO05D009543 8.4e-09 65.1 70 58.6
MELO3C025920.2 Cucumis melo HOM05D000163 ORTHO05D009543 2.4e-08 63.5 99 38.4
FAN11G1714 Fragaria x ananassa HOM05D000163 ORTHO05D009543 4.1e-08 62.8 51 58.8
Eucgr.B02373 Eucalyptus grandis HOM05D000163 ORTHO05D009543 7.1e-08 62.0 265 26.0
Psat3g012360 Pisum sativum HOM05D002040 ORTHO05D319558 6.0e-07 58.9 163 34.4
TAR636G1991 Trochodendron aralioides HOM05D000163 ORTHO05D415669 6.0e-07 58.9 103 38.8
Carub.0004s2862 Capsella rubella HOM05D000163 ORTHO05D000962 1.7e-06 57.4 194 28.9
RcHm_v2.0_Chr1g0355361 Rosa chinensis HOM05D000163 ORTHO05D000962 3.9e-06 56.2 47 57.4


User provided reference genes

Program Settings