Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.VVI86N Arachis hypogaea HOM05D033157 ORTHO05D087449 1.4e-51 206.1 111 100.0
arahy.Tifrunner.gnm1.ann1.045FSF Arachis hypogaea HOM05D033157 ORTHO05D086115 1.6e-39 166.0 107 87.9
arahy.Tifrunner.gnm1.ann1.63T23V Arachis hypogaea HOM05D000501 ORTHO05D000376 5.7e-16 87.8 54 83.3
arahy.Tifrunner.gnm1.ann1.CP0U6E Arachis hypogaea HOM05D000501 ORTHO05D000376 4.6e-10 68.2 36 94.4
arahy.Tifrunner.gnm1.ann1.ZJGI0U Arachis hypogaea HOM05D000501 ORTHO05D000376 4.6e-10 68.2 36 94.4
vmacro19095 Vaccinium macrocarpon HOM05D000501 ORTHO05D000376 1.7e-07 59.7 36 77.8
arahy.Tifrunner.gnm1.ann1.77EU82 Arachis hypogaea HOM05D000106 ORTHO05D013005 2.8e-07 58.9 34 97.1
arahy.Tifrunner.gnm1.ann1.JLHH9C Arachis hypogaea HOM05D000501 ORTHO05D000376 2.8e-07 58.9 42 69.0
Actinidia25501 Actinidia chinensis HOM05D000501 ORTHO05D000376 3.7e-07 58.5 36 72.2
arahy.Tifrunner.gnm1.ann1.P0P2QF Arachis hypogaea HOM05D000501 ORTHO05D000376 3.7e-07 58.5 42 66.7
Migut.D01166 Erythranthe guttata HOM05D000501 ORTHO05D000376 4.8e-07 58.2 36 75.0
TPR.G29195 Trifolium pratense HOM05D000501 ORTHO05D000376 4.8e-07 58.2 46 67.4
Actinidia18278 Actinidia chinensis HOM05D000501 ORTHO05D000376 6.3e-07 57.8 36 72.2
CSS0008067 Camellia sinensis var. sinensis HOM05D000501 ORTHO05D000376 6.3e-07 57.8 36 75.0
CSS0045221 Camellia sinensis var. sinensis HOM05D000501 ORTHO05D000376 6.3e-07 57.8 36 75.0
unitig_0.g1095 Utricularia gibba HOM05D000501 ORTHO05D000376 6.3e-07 57.8 48 58.3
arahy.Tifrunner.gnm1.ann1.DT3E7E Arachis hypogaea HOM05D000106 ORTHO05D013005 8.2e-07 57.4 33 97.0
Cc04_g05580 Coffea canephora HOM05D000501 ORTHO05D000376 8.2e-07 57.4 42 71.4
Oeu012861.1 Olea europaea HOM05D000501 ORTHO05D000376 8.2e-07 57.4 36 75.0
CSS0039845 Camellia sinensis var. sinensis HOM05D000501 ORTHO05D000376 1.4e-06 56.6 36 69.4
COL.COLO4_37287 Corchorus olitorius HOM05D000501 ORTHO05D000376 1.4e-06 56.6 36 72.2
Medtr3g098320 Medicago truncatula HOM05D000501 ORTHO05D000376 1.4e-06 56.6 46 65.2
Actinidia39282 Actinidia chinensis HOM05D000501 ORTHO05D000376 1.8e-06 56.2 36 66.7
MSTRG.22824 Avicennia marina HOM05D000501 ORTHO05D000376 1.8e-06 56.2 36 75.0
Migut.D01163 Erythranthe guttata HOM05D000501 ORTHO05D000376 1.8e-06 56.2 42 66.7
Lalb_Chr07g0183931 Lupinus albus HOM05D000501 ORTHO05D000376 2.4e-06 55.8 35 77.1
Nitab4.5_0005215g0040 Nicotiana tabacum HOM05D000501 ORTHO05D000376 2.4e-06 55.8 36 66.7
VMungo0251G0472 Vigna mungo HOM05D000501 ORTHO05D000376 2.4e-06 55.8 35 74.3
CAN.G1089.8 Capsicum annuum HOM05D000501 ORTHO05D000376 3.1e-06 55.5 36 66.7
Lalb_Chr12g0202681 Lupinus albus HOM05D000501 ORTHO05D000376 4.1e-06 55.1 35 77.1
TPR.G7806 Trifolium pratense HOM05D000501 ORTHO05D000376 4.1e-06 55.1 46 60.9
Lj4g0019193 Lotus japonicus HOM05D000501 ORTHO05D000376 5.3e-06 54.7 35 74.3
Medtr3g098380 Medicago truncatula HOM05D000501 ORTHO05D000376 5.3e-06 54.7 46 63.0
Psat5g055920 Pisum sativum HOM05D000501 ORTHO05D000376 6.9e-06 54.3 35 68.6
Thecc.03G143500 Theobroma cacao HOM05D000501 ORTHO05D000376 6.9e-06 54.3 36 69.4
Ca_17047_v3 Cicer arietinum L. HOM05D000501 ORTHO05D000376 9.1e-06 53.9 35 71.4
Ca_28275_v3 Cicer arietinum L. HOM05D000501 ORTHO05D000376 9.1e-06 53.9 35 71.4
Dinv13694 Davidia involucrata HOM05D000501 ORTHO05D000376 9.1e-06 53.9 35 71.4
Duzib205G1745 Durio zibethinus HOM05D000501 ORTHO05D000376 9.1e-06 53.9 36 66.7
Lj1g0005887 Lotus japonicus HOM05D000501 ORTHO05D000376 9.1e-06 53.9 35 74.3
Medtr8g095520 Medicago truncatula HOM05D000501 ORTHO05D000376 9.1e-06 53.9 46 58.7
THA.LOC104811550 Tarenaya hassleriana HOM05D000501 ORTHO05D000376 9.1e-06 53.9 36 72.2


User provided reference genes

Program Settings