Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.VT7US1 Arachis hypogaea HOM05D007328 ORTHO05D009246 2.9e-55 218.4 115 100.0
arahy.Tifrunner.gnm1.ann1.RLPB8M Arachis hypogaea HOM05D007328 ORTHO05D009246 3.9e-44 181.4 96 100.0
Ca_19431_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 2.9e-31 138.7 95 72.6
Lj4g0027684 Lotus japonicus HOM05D007328 ORTHO05D009246 2.9e-31 138.7 95 75.8
Phvul.003G206900 Phaseolus vulgaris HOM05D007328 ORTHO05D009246 6.5e-31 137.5 95 72.6
Glyma.17G125900 Glycine max HOM05D007328 ORTHO05D009246 8.4e-31 137.1 95 72.6
Medtr4g104430 Medicago truncatula HOM05D007328 ORTHO05D009246 1.1e-30 136.7 97 71.1
Glyma.05G043400 Glycine max HOM05D007328 ORTHO05D009246 2.5e-30 135.6 95 71.6
Dinv38499 Davidia involucrata HOM05D007328 ORTHO05D009246 4.2e-30 134.8 95 75.8
Ciclev10022963m.g Citrus clementina HOM05D007328 ORTHO05D009246 5.5e-30 134.4 102 71.6
RcHm_v2.0_Chr7g0191941 Rosa chinensis HOM05D007328 ORTHO05D009246 2.1e-29 132.5 95 72.6
Prupe.5G161600 Prunus persica HOM05D007328 ORTHO05D009246 3.5e-29 131.7 95 70.5
TPR.G37571 Trifolium pratense HOM05D007328 ORTHO05D009246 3.5e-29 131.7 99 68.7
Sc04g0001180 Simmondsia chinensis HOM05D007328 ORTHO05D009246 6.0e-29 131.0 95 70.5
CSS0000986 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 1.8e-28 129.4 95 71.6
PGR044G2544 Punica granatum HOM05D007328 ORTHO05D009246 1.8e-28 129.4 96 72.9
Duzib205G1420 Durio zibethinus HOM05D007328 ORTHO05D009246 3.0e-28 128.6 97 70.1
FvH4_5g06690 Fragaria vesca HOM05D007328 ORTHO05D009246 3.9e-28 128.3 97 72.2
FAN04G3262 Fragaria x ananassa HOM05D007328 ORTHO05D009246 3.9e-28 128.3 97 72.2
QL10p005926 Quercus lobata HOM05D007328 ORTHO05D009246 3.9e-28 128.3 94 70.2
CANSAT80G1532 Cannabis sativa HOM05D007328 ORTHO05D009246 6.7e-28 127.5 95 69.5
Psat4g062040 Pisum sativum HOM05D007328 ORTHO05D009246 6.7e-28 127.5 90 70.0
CiPaw.12G033600 Carya illinoinensis HOM05D007328 ORTHO05D009246 8.7e-28 127.1 95 69.5
FAN13G1360 Fragaria x ananassa HOM05D007328 ORTHO05D009246 8.7e-28 127.1 97 71.1
FAN18G0524 Fragaria x ananassa HOM05D007328 ORTHO05D009246 1.1e-27 126.7 97 71.1
Gohir.A12G186600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.1e-27 126.7 97 70.1
Hma1.2p1_2431F.1_g322030 Hydrangea macrophylla HOM05D007328 ORTHO05D009246 1.1e-27 126.7 99 70.7
TAR629G2292 Trochodendron aralioides HOM05D007328 ORTHO05D009246 1.1e-27 126.7 97 69.1
Gohir.D12G189600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.5e-27 126.3 97 69.1
Haze_07631 Corylus avellana HOM05D007328 ORTHO05D009246 1.9e-27 125.9 96 70.8
Lalb_Chr07g0183141 Lupinus albus HOM05D007328 ORTHO05D009246 1.9e-27 125.9 95 71.6
Gorai.008G203400 Gossypium raimondii HOM05D007328 ORTHO05D009246 2.5e-27 125.6 97 69.1
COL.COLO4_19806 Corchorus olitorius HOM05D007328 ORTHO05D009246 3.3e-27 125.2 98 70.4
PSO063G4259 Papaver somniferum HOM05D007328 ORTHO05D009246 5.7e-27 124.4 103 62.1
TWI23G0848 Tripterygium wilfordii HOM05D007328 ORTHO05D009246 7.4e-27 124.0 95 68.4
Aqoxy5G03651 Aquilegia oxysepala HOM05D007328 ORTHO05D009246 9.6e-27 123.6 95 69.5
Rhsim12G0170200 Rhododendron simsii HOM05D007328 ORTHO05D009246 2.1e-26 122.5 95 68.4
GSVIVG01007592001 Vitis vinifera HOM05D007328 ORTHO05D009246 2.1e-26 122.5 95 68.4
PSO067G0004 Papaver somniferum HOM05D007328 ORTHO05D009246 1.1e-25 120.2 97 63.9
Thecc.03G118600 Theobroma cacao HOM05D007328 ORTHO05D009246 1.1e-25 120.2 97 66.0
ClCG06G017550 Citrullus lanatus HOM05D007328 ORTHO05D009246 1.4e-25 119.8 108 61.1
CsaV3_1G000900 Cucumis sativus L. HOM05D007328 ORTHO05D009246 1.8e-25 119.4 98 67.3
BcaC08g47455 Brassica carinata HOM05D007328 ORTHO05D009246 2.4e-25 119.0 97 66.0
A07p44000 Brassica napus HOM05D004141 ORTHO05D005416 2.4e-25 119.0 97 66.0
C06p52680 Brassica napus HOM05D004141 ORTHO05D005416 2.4e-25 119.0 97 66.0
BraA07t31907Z Brassica rapa HOM05D007328 ORTHO05D009246 2.4e-25 119.0 97 66.0
DCAR_007459 Daucus carota HOM05D007328 ORTHO05D009246 2.4e-25 119.0 95 65.3
FAN08G2248 Fragaria x ananassa HOM05D007328 ORTHO05D009246 2.4e-25 119.0 114 61.4
Potri.012G090600 Populus trichocarpa HOM05D007328 ORTHO05D009246 3.1e-25 118.6 96 65.6
Cc04_g10870 Coffea canephora HOM05D007328 ORTHO05D009246 4.1e-25 118.2 97 66.0
Sed0026647 Sechium edule HOM05D007328 ORTHO05D009246 4.1e-25 118.2 95 64.2
BcaB03g16036 Brassica carinata HOM05D004141 ORTHO05D005416 5.3e-25 117.9 97 64.9
ECA246G4123 Erigeron canadensis HOM05D007328 ORTHO05D009246 5.3e-25 117.9 95 64.2
Sp5g33820 Schrenkiella parvula HOM05D007328 ORTHO05D009246 6.9e-25 117.5 97 64.9
Nitab4.5_0003542g0010 Nicotiana tabacum HOM05D007328 ORTHO05D009246 1.5e-24 116.3 102 60.8
Duzib068G0271 Durio zibethinus HOM05D007328 ORTHO05D009246 2.0e-24 115.9 95 63.2
THA.LOC104809276 Tarenaya hassleriana HOM05D007328 ORTHO05D009246 2.0e-24 115.9 95 62.1
Hund05612 Selenicereus undatus HOM05D007328 ORTHO05D009246 2.6e-24 115.5 97 61.9
AT1G78790 Arabidopsis thaliana HOM05D007328 ORTHO05D009246 3.4e-24 115.2 97 62.9
Carub.0002s1493 Capsella rubella HOM05D007328 ORTHO05D009246 3.4e-24 115.2 97 62.9
Gohir.A09G244400 Gossypium hirsutum HOM05D007328 ORTHO05D009246 3.4e-24 115.2 97 62.9
Gorai.006G269700 Gossypium raimondii HOM05D007328 ORTHO05D009246 3.4e-24 115.2 97 62.9
AL2G39190 Arabidopsis lyrata HOM05D007328 ORTHO05D009246 4.5e-24 114.8 97 62.9
Lsat_1_v5_gn_3_90700 Lactuca sativa HOM05D007328 ORTHO05D009246 4.5e-24 114.8 95 63.2
Nitab4.5_0000510g0070 Nicotiana tabacum HOM05D007328 ORTHO05D009246 7.6e-24 114.0 102 59.8
CAN.G126.95 Capsicum annuum HOM05D007328 ORTHO05D009246 1.3e-23 113.2 95 63.2
HanXRQChr08g0235201 Helianthus annuus HOM05D007328 ORTHO05D009246 1.3e-23 113.2 91 64.8
Ah.08g218420 Amaranthus hybridus HOM05D007328 ORTHO05D009246 1.7e-23 112.8 96 61.5
Lsat_1_v5_gn_5_12821 Lactuca sativa HOM05D007328 ORTHO05D009246 1.7e-23 112.8 95 62.1
Solyc03g111790.4 Solanum lycopersicum HOM05D007328 ORTHO05D009246 2.2e-23 112.5 95 62.1
Sopen03g030890 Solanum pennellii HOM05D007328 ORTHO05D009246 2.2e-23 112.5 95 62.1
CARHR072340 Cardamine hirsuta HOM05D007328 ORTHO05D009246 2.9e-23 112.1 97 61.9
Gohir.D09G245301 Gossypium hirsutum HOM05D007328 ORTHO05D009246 2.9e-23 112.1 97 61.9
PGSC0003DMG400015227 Solanum tuberosum HOM05D007328 ORTHO05D009246 6.5e-23 110.9 95 61.1
MELO3C026242.2 Cucumis melo HOM05D007328 ORTHO05D009246 1.4e-22 109.8 98 65.3
SGA_v2.0_scaffold7G04170 Striga asiatica HOM05D007328 ORTHO05D009246 5.5e-22 107.8 95 62.1
Migut.D02033 Erythranthe guttata HOM05D007328 ORTHO05D009246 7.2e-22 107.5 95 64.2
MSTRG.4340 Avicennia marina HOM05D007328 ORTHO05D009246 9.3e-22 107.1 95 62.1
SalBow6G3374 Salvia bowleyana HOM05D007328 ORTHO05D009246 1.2e-21 106.7 95 63.2
Sabra12G0065400 Salix brachista HOM05D007328 ORTHO05D009246 1.3e-20 103.2 81 67.9
BolC6t40286H Brassica oleracea HOM05D007328 ORTHO05D009246 1.1e-19 100.1 81 66.7
HPP92_017655 Vanilla planifolia HOM05D007328 ORTHO05D009246 1.5e-19 99.8 96 58.3
vmacro16689 Vaccinium macrocarpon HOM05D007328 ORTHO05D009246 2.5e-19 99.0 67 74.6
C03p92780 Brassica napus HOM05D007328 ORTHO05D009246 3.3e-19 98.6 81 65.4
Ca_30674_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 3.3e-19 98.6 67 74.6
Pp3c15_7370 Physcomitrium patens HOM05D007328 ORTHO05D009246 4.3e-19 98.2 97 59.8
SHI17354 Sapria himalayana HOM05D007328 ORTHO05D009246 4.3e-19 98.2 95 56.8
Manes.06G112300 Manihot esculenta HOM05D007328 ORTHO05D009246 5.7e-19 97.8 89 61.8
CSS0030634 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 7.4e-19 97.4 95 61.1
CDE02G4603 Ceratophyllum demersum HOM05D007328 ORTHO05D009246 9.7e-19 97.1 106 52.8
QL10p005934 Quercus lobata HOM05D007328 ORTHO05D009246 3.7e-18 95.1 64 73.4
Aa31LG4G2240 Aethionema arabicum HOM05D007328 ORTHO05D009246 8.2e-18 94.0 67 73.1
Os04g0481500 Oryza sativa ssp. japonica HOM05D007328 ORTHO05D009246 1.1e-17 93.6 98 55.1
AagrBONN_evm.TU.Sc2ySwM_369.482 Anthoceros agrestis HOM05D007328 ORTHO05D009246 2.4e-17 92.4 105 54.3
SEGI_23865 Sequoiadendron giganteum HOM05D007328 ORTHO05D009246 3.1e-17 92.0 65 76.9
Mapoly0166s0013 Marchantia polymorpha HOM05D007328 ORTHO05D009246 5.3e-17 91.3 84 60.7
unitig_62.g23226 Utricularia gibba HOM05D007328 ORTHO05D009246 2.0e-16 89.4 95 54.7
AUR62001234 Chenopodium quinoa HOM05D007328 ORTHO05D009246 3.4e-16 88.6 61 72.1
Nn3g16640 Nelumbo nucifera HOM05D007328 ORTHO05D009246 2.5e-14 82.4 61 67.2
Actinidia08840 Actinidia chinensis HOM05D007328 ORTHO05D009246 1.6e-13 79.7 50 76.0
MBI10_g15972_MAGBIO Magnolia biondii HOM05D007328 ORTHO05D009246 2.7e-13 79.0 52 78.8
ATR0199G045 Amborella trichopoda HOM05D007328 ORTHO05D009246 6.1e-13 77.8 50 80.0
Thhalv10019789m.g Eutrema salsugineum HOM05D007328 ORTHO05D009246 3.0e-12 75.5 52 75.0
Atru.chr9.1808 Acer truncatum HOM05D007328 ORTHO05D009246 5.1e-12 74.7 54 70.4
ECA233G5563 Erigeron canadensis HOM05D000006 ORTHO05D000001 7.4e-11 70.9 52 73.1
SMO203G0244 Selaginella moellendorffii HOM05D007328 ORTHO05D009246 3.7e-10 68.6 52 65.4
CSS0039715 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 2.9e-07 58.9 107 42.1


User provided reference genes

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