Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.VR587A Arachis hypogaea HOM05D005831 ORTHO05D007007 9.3e-226 786.6 402 100.0
arahy.Tifrunner.gnm1.ann1.2ULK6I Arachis hypogaea HOM05D005831 ORTHO05D007007 4.8e-97 359.0 409 54.5
Glyma.14G099100 Glycine max HOM05D005831 ORTHO05D007007 1.2e-84 317.8 414 50.0
VMungo0647G0599 Vigna mungo HOM05D005831 ORTHO05D007007 2.7e-84 316.6 414 49.8
Medtr1g015390 Medicago truncatula HOM05D005831 ORTHO05D007007 1.5e-82 310.8 410 49.8
Phvul.001G039000 Phaseolus vulgaris HOM05D005831 ORTHO05D007007 7.4e-82 308.5 414 49.5
Glyma.17G225600 Glycine max HOM05D005831 ORTHO05D007007 2.8e-81 306.6 414 49.0
Lj5g0001901 Lotus japonicus HOM05D005831 ORTHO05D007007 1.5e-79 300.8 417 48.7
Lalb_Chr09g0334801 Lupinus albus HOM05D005831 ORTHO05D007007 5.9e-79 298.9 415 48.2
arahy.Tifrunner.gnm1.ann1.12X2WP Arachis hypogaea HOM05D005831 ORTHO05D007007 1.1e-77 294.7 366 52.5
Psat6g022600 Pisum sativum HOM05D005831 ORTHO05D007007 5.7e-74 282.3 298 55.0
PGR004G2090 Punica granatum HOM05D005831 ORTHO05D007007 3.1e-72 276.6 417 44.6
Prupe.1G405700 Prunus persica HOM05D005831 ORTHO05D007007 2.0e-71 273.9 419 43.7
Hma1.2p1_0231F.1_g097400 Hydrangea macrophylla HOM05D005831 ORTHO05D007007 4.5e-71 272.7 414 45.4
QL04p096581 Quercus lobata HOM05D005831 ORTHO05D007007 1.7e-70 270.8 417 43.9
Duzib150G1275 Durio zibethinus HOM05D005831 ORTHO05D007007 6.5e-70 268.9 413 44.6
Thecc.09G062000 Theobroma cacao HOM05D005831 ORTHO05D007007 1.1e-69 268.1 415 43.4
GSVIVG01035453001 Vitis vinifera HOM05D005831 ORTHO05D007007 1.1e-69 268.1 412 43.7
CANSAT25G0005 Cannabis sativa HOM05D005831 ORTHO05D007007 1.9e-69 267.3 412 45.4
MD08G1070400 Malus domestica HOM05D005831 ORTHO05D007007 2.5e-69 266.9 417 43.4
RcHm_v2.0_Chr6g0311631 Rosa chinensis HOM05D005831 ORTHO05D007007 2.5e-69 266.9 407 43.7
Sed0012871 Sechium edule HOM05D005831 ORTHO05D007007 1.6e-68 264.2 416 43.3
TWI15G0825 Tripterygium wilfordii HOM05D005831 ORTHO05D007007 2.1e-68 263.8 415 44.3
FvH4_2g31140 Fragaria vesca HOM05D005831 ORTHO05D007007 2.7e-68 263.5 410 43.4
CsaV3_4G036010 Cucumis sativus L. HOM05D005831 ORTHO05D007007 4.6e-68 262.7 416 43.8
MD15G1051800 Malus domestica HOM05D005831 ORTHO05D007007 6.1e-68 262.3 419 43.0
FAN24G1737 Fragaria x ananassa HOM05D005831 ORTHO05D007007 1.4e-67 261.2 410 43.2
CSS0021293 Camellia sinensis var. sinensis HOM05D005831 ORTHO05D007007 1.8e-67 260.8 415 42.9
Cpa.g.sc126.34 Carica papaya HOM05D005831 ORTHO05D007007 1.8e-67 260.8 413 43.3
Potri.006G222000 Populus trichocarpa HOM05D005831 ORTHO05D007007 2.3e-67 260.4 417 42.9
Manes.03G052700 Manihot esculenta HOM05D005831 ORTHO05D007007 3.0e-67 260.0 414 43.0
Hma1.2p1_0231F.1_g097410 Hydrangea macrophylla HOM05D005831 ORTHO05D007007 1.1e-66 258.1 297 51.9
vmacro07801 Vaccinium macrocarpon HOM05D005831 ORTHO05D007007 1.1e-66 258.1 414 41.8
ClCG05G015690 Citrullus lanatus HOM05D005831 ORTHO05D007007 1.5e-66 257.7 416 43.0
Cc08_g01270 Coffea canephora HOM05D005831 ORTHO05D007007 1.5e-66 257.7 408 42.4
Cfa018014 Carpinus fangiana HOM05D005831 ORTHO05D007007 2.6e-66 256.9 409 42.5
CiPaw.15G092600 Carya illinoinensis HOM05D005831 ORTHO05D007007 2.6e-66 256.9 418 41.6
Eucgr.C03149 Eucalyptus grandis HOM05D005831 ORTHO05D007007 4.4e-66 256.1 410 41.2
Gorai.001G020700 Gossypium raimondii HOM05D005831 ORTHO05D007007 5.7e-66 255.8 417 43.2
Nn8g38706 Nelumbo nucifera HOM05D005831 ORTHO05D007007 7.4e-66 255.4 415 42.7
TWI38G0260 Tripterygium wilfordii HOM05D005831 ORTHO05D007007 7.4e-66 255.4 412 42.0
Aqoxy3G01546 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 9.7e-66 255.0 417 40.5
PGSC0003DMG400003758 Solanum tuberosum HOM05D005831 ORTHO05D007007 2.2e-65 253.8 413 41.9
Ca_13107_v3 Cicer arietinum L. HOM05D005831 ORTHO05D007007 1.1e-64 251.5 353 48.2
Gohir.D07G020000 Gossypium hirsutum HOM05D005831 ORTHO05D007007 1.1e-64 251.5 422 42.4
Solyc04g080930.4 Solanum lycopersicum HOM05D005831 ORTHO05D007007 1.1e-64 251.5 413 42.6
TPR.G38878 Trifolium pratense HOM05D005831 ORTHO05D007007 1.1e-64 251.5 276 54.3
Ciclev10025877m.g Citrus clementina HOM05D005831 ORTHO05D007007 1.4e-64 251.1 413 41.6
MSTRG.25981 Avicennia marina HOM05D005831 ORTHO05D007007 4.1e-64 249.6 410 42.4
Sopen04g034540 Solanum pennellii HOM05D005831 ORTHO05D007007 4.1e-64 249.6 413 42.4
Actinidia25695 Actinidia chinensis HOM05D005831 ORTHO05D007007 5.3e-64 249.2 414 43.0
CAN.G6.15 Capsicum annuum HOM05D005831 ORTHO05D007007 1.5e-63 247.7 413 41.4
HanXRQChr12g0359011 Helianthus annuus HOM05D005831 ORTHO05D007007 1.5e-63 247.7 411 42.3
Migut.A00086 Erythranthe guttata HOM05D005831 ORTHO05D007007 2.0e-63 247.3 400 42.0
AL4G18970 Arabidopsis lyrata HOM05D005831 ORTHO05D007007 2.6e-63 246.9 409 41.8
MBI19_g11845_MAGBIO Magnolia biondii HOM05D005831 ORTHO05D007007 4.5e-63 246.1 419 41.3
ECA234G1597 Erigeron canadensis HOM05D005831 ORTHO05D007007 5.9e-63 245.7 409 42.5
PSO210G7793 Papaver somniferum HOM05D005831 ORTHO05D007007 5.9e-63 245.7 416 39.9
PSO210G0521 Papaver somniferum HOM05D005831 ORTHO05D007007 1.0e-62 245.0 418 40.2
Gohir.A07G020300 Gossypium hirsutum HOM05D005831 ORTHO05D007007 1.3e-62 244.6 298 49.0
BcaC07g40824 Brassica carinata HOM05D005831 ORTHO05D007007 2.9e-62 243.4 391 41.2
AUR62020581 Chenopodium quinoa HOM05D005831 ORTHO05D007007 2.9e-62 243.4 414 41.3
QL04p096516 Quercus lobata HOM05D000005 ORTHO05D000012 2.9e-62 243.4 315 46.7
EL10Ac2g03793 Beta vulgaris HOM05D005831 ORTHO05D007007 5.0e-62 242.7 406 40.6
THA.LOC104806019 Tarenaya hassleriana HOM05D005831 ORTHO05D007007 1.9e-61 240.7 408 40.4
BcaB08g35248 Brassica carinata HOM05D005831 ORTHO05D007007 2.5e-61 240.4 396 40.9
Carub.0004s0626 Capsella rubella HOM05D005831 ORTHO05D007007 2.5e-61 240.4 409 40.8
Dinv41837 Davidia involucrata HOM05D005831 ORTHO05D007007 5.5e-61 239.2 283 50.9
C08p38160 Brassica napus HOM05D005831 ORTHO05D007007 9.4e-61 238.4 392 41.6
BolC8t51391H Brassica oleracea HOM05D005831 ORTHO05D007007 9.4e-61 238.4 392 41.6
Peaxi162Scf00101g01522 Petunia axillaris HOM05D005831 ORTHO05D007007 9.4e-61 238.4 407 41.0
A09p54720 Brassica napus HOM05D005831 ORTHO05D007007 3.6e-60 236.5 391 40.2
Sp4g07000 Schrenkiella parvula HOM05D005831 ORTHO05D007007 3.6e-60 236.5 406 38.9
Thhalv10002014m.g Eutrema salsugineum HOM05D005831 ORTHO05D007007 4.7e-60 236.1 406 39.2
COL.COLO4_21126 Corchorus olitorius HOM05D005831 ORTHO05D007007 1.8e-59 234.2 375 42.7
FAN15G1366 Fragaria x ananassa HOM05D005831 ORTHO05D007007 3.9e-59 233.0 367 43.3
A09p55230 Brassica napus HOM05D005831 ORTHO05D007007 8.8e-59 231.9 392 40.1
BraA09t40881Z Brassica rapa HOM05D005831 ORTHO05D007007 8.8e-59 231.9 392 40.1
Nitab4.5_0000446g0240 Nicotiana tabacum HOM05D005831 ORTHO05D007007 4.4e-58 229.6 365 43.0
Aa31LG5G18500 Aethionema arabicum HOM05D005831 ORTHO05D007007 7.4e-58 228.8 415 37.8
Lsat_1_v5_gn_5_79500 Lactuca sativa HOM05D005831 ORTHO05D007007 7.4e-58 228.8 437 39.4
Rhsim03G0040100 Rhododendron simsii HOM05D005831 ORTHO05D007007 1.4e-56 224.6 347 42.7
Haze_18115 Corylus avellana HOM05D005831 ORTHO05D007007 1.8e-56 224.2 416 40.1
Oeu027284.3 Olea europaea HOM05D005831 ORTHO05D007007 1.8e-56 224.2 455 36.5
Nitab4.5_0009773g0010 Nicotiana tabacum HOM05D005831 ORTHO05D007007 3.5e-55 219.9 370 41.9
Sabra06G0171700 Salix brachista HOM05D005831 ORTHO05D007007 5.9e-55 219.2 409 41.1
AUR62009089 Chenopodium quinoa HOM05D005831 ORTHO05D007007 7.7e-55 218.8 393 41.2
AT2G26350 Arabidopsis thaliana HOM05D005831 ORTHO05D007007 1.5e-53 214.5 346 42.5
TAR383G0824 Trochodendron aralioides HOM05D005831 ORTHO05D007007 1.9e-53 214.2 244 51.2
SalBow4G2055 Salvia bowleyana HOM05D005831 ORTHO05D001900 8.0e-52 208.8 398 38.4
Sed0000493 Sechium edule HOM05D005831 ORTHO05D007007 4.0e-51 206.5 256 48.4
DCAR_003715 Daucus carota HOM05D005831 ORTHO05D007007 6.7e-51 205.7 346 41.9
Os07g0608800 Oryza sativa ssp. japonica HOM05D005831 ORTHO05D007007 6.7e-51 205.7 414 37.7
BraA09t40930Z Brassica rapa HOM05D005831 ORTHO05D007007 7.5e-50 202.2 320 41.9
Zm00001eb108960 Zea mays HOM05D005831 ORTHO05D007007 2.4e-48 197.2 274 43.8
Migut.A00085 Erythranthe guttata HOM05D005831 ORTHO05D007007 1.6e-47 194.5 227 49.8
Lj2A627G34 Lonicera japonica HOM05D005831 ORTHO05D007007 3.8e-46 189.9 418 36.6
unitig_748.g8240 Utricularia gibba HOM05D005831 ORTHO05D007007 1.1e-45 188.3 365 38.6
CDE06G1722 Ceratophyllum demersum HOM05D005831 ORTHO05D007007 2.7e-44 183.7 315 40.0
Sc09g0010090 Simmondsia chinensis HOM05D005831 ORTHO05D007007 3.6e-44 183.3 368 37.8
ATR0598G074 Amborella trichopoda HOM05D005831 ORTHO05D007007 8.8e-43 178.7 367 37.9
SHI18844 Sapria himalayana HOM05D005831 ORTHO05D007007 2.0e-42 177.6 274 42.7
TPR.G10653 Trifolium pratense HOM05D005831 ORTHO05D007007 8.6e-38 162.2 258 45.0
Mapoly0029s0064 Marchantia polymorpha HOM05D005831 ORTHO05D007007 1.7e-33 147.9 416 29.6
Aqoxy2G00096 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 7.3e-29 132.5 417 29.7
AagrBONN_evm.TU.Sc2ySwM_117.3066 Anthoceros agrestis HOM05D005831 ORTHO05D007007 1.7e-25 121.3 204 39.7
CARHR118440 Cardamine hirsuta HOM05D005831 ORTHO05D007007 6.4e-25 119.4 137 48.2
Aqoxy3G01853 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 1.1e-24 118.6 420 29.0
FAN20G1335 Fragaria x ananassa HOM05D001583 ORTHO05D007007 2.0e-23 114.4 413 29.3
HPP92_027844 Vanilla planifolia HOM05D005831 ORTHO05D007007 3.0e-22 110.5 141 46.8
HPP92_027843 Vanilla planifolia HOM05D005831 ORTHO05D007007 1.1e-21 108.6 156 42.3
TPR.G40658 Trifolium pratense HOM05D005831 ORTHO05D007007 8.0e-20 102.4 102 56.9
FAN27G2028 Fragaria x ananassa HOM05D005831 ORTHO05D007007 4.0e-19 100.1 229 34.1
Pp3c13_19650 Physcomitrium patens HOM05D005831 ORTHO05D007007 4.0e-19 100.1 413 26.6
Atru.chr7.1858 Acer truncatum HOM05D005831 ORTHO05D007007 8.3e-17 92.4 221 34.8
SGA_v2.0_scaffold64G21865 Striga asiatica HOM05D005831 ORTHO05D007007 1.9e-16 91.3 406 26.4
Psat0s2173g0120 Pisum sativum HOM05D012210 ORTHO05D007007 1.2e-15 88.6 51 86.3
MELO3C016909.2 Cucumis melo HOM05D005831 ORTHO05D007007 3.5e-15 87.0 222 33.8
Actinidia27570 Actinidia chinensis HOM05D005831 ORTHO05D007007 8.6e-14 82.4 259 31.3
SEGI_09079 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.2e-12 78.6 151 33.8
RcHm_v2.0_Chr4g0387071 Rosa chinensis HOM05D005831 ORTHO05D007007 5.8e-10 69.7 99 43.4
PRCOL_00001676 Prasinoderma coloniale HOM05D005831 ORTHO05D007007 2.9e-09 67.4 260 27.3
arahy.Tifrunner.gnm1.ann1.7ZQ5SA Arachis hypogaea HOM05D038513 ORTHO05D083858 1.6e-07 61.6 73 50.7
arahy.Tifrunner.gnm1.ann1.CU0UJG Arachis hypogaea HOM05D038513 ORTHO05D002262 1.6e-07 61.6 73 50.7
QL04p096475 Quercus lobata HOM05D000101 ORTHO05D000089 1.6e-07 61.6 113 37.2
Aqoxy5G02406 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 1.3e-06 58.5 204 31.4


User provided reference genes

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