Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.VQM2ML Arachis hypogaea HOM05D006294 ORTHO05D007668 3.7e-72 275.0 166 100.0
arahy.Tifrunner.gnm1.ann1.DS4D2V Arachis hypogaea HOM05D006294 ORTHO05D007668 6.9e-50 201.1 118 83.9
arahy.Tifrunner.gnm1.ann1.0NBS6K Arachis hypogaea HOM05D006294 ORTHO05D007668 9.0e-50 200.7 119 83.2
arahy.Tifrunner.gnm1.ann1.27KW97 Arachis hypogaea HOM05D006294 ORTHO05D007668 9.0e-50 200.7 119 83.2
arahy.Tifrunner.gnm1.ann1.DZVX1N Arachis hypogaea HOM05D006294 ORTHO05D007668 2.6e-49 199.1 118 83.1
arahy.Tifrunner.gnm1.ann1.SDBD8X Arachis hypogaea HOM05D006294 ORTHO05D007668 8.7e-45 184.1 119 76.5
arahy.Tifrunner.gnm1.ann1.PQ7N7P Arachis hypogaea HOM05D006294 ORTHO05D007668 1.4e-42 176.8 118 78.0
arahy.Tifrunner.gnm1.ann1.DT0J5B Arachis hypogaea HOM05D006294 ORTHO05D007668 5.8e-41 171.4 110 79.1
arahy.Tifrunner.gnm1.ann1.ED6YY1 Arachis hypogaea HOM05D006294 ORTHO05D007668 1.9e-39 166.4 118 74.6
Lj5g0013499 Lotus japonicus HOM05D006294 ORTHO05D007668 1.6e-38 163.3 118 68.6
Lalb_Chr06g0163771 Lupinus albus HOM05D006294 ORTHO05D007668 7.9e-38 161.0 118 67.8
arahy.Tifrunner.gnm1.ann1.5K47IW Arachis hypogaea HOM05D006294 ORTHO05D001225 5.1e-37 158.3 104 74.0
TPR.G2447 Trifolium pratense HOM05D006294 ORTHO05D007668 4.6e-30 135.2 121 57.0
TPR.G2441 Trifolium pratense HOM05D006294 ORTHO05D007668 1.8e-29 133.3 121 56.2
CiPaw.06G119700 Carya illinoinensis HOM05D006294 ORTHO05D007668 5.1e-29 131.7 117 53.0
Ca_03291_v3 Cicer arietinum L. HOM05D006294 ORTHO05D007668 1.5e-28 130.2 144 47.9
VMungo0720G0114 Vigna mungo HOM05D006294 ORTHO05D007668 2.5e-28 129.4 123 55.3
Glyma.20G105600 Glycine max HOM05D006294 ORTHO05D007668 1.6e-27 126.7 117 53.8
RcHm_v2.0_Chr6g0279111 Rosa chinensis HOM05D006294 ORTHO05D007668 1.6e-27 126.7 123 52.0
Prupe.8G170200 Prunus persica HOM05D006294 ORTHO05D007668 2.1e-27 126.3 115 53.9
arahy.Tifrunner.gnm1.ann1.A4L1LT Arachis hypogaea HOM05D006294 ORTHO05D007668 3.7e-27 125.6 72 81.9
MD10G1129400 Malus domestica HOM05D006294 ORTHO05D007668 1.1e-26 124.0 123 52.0
Haze_02090 Corylus avellana HOM05D006294 ORTHO05D007668 3.4e-25 119.0 118 48.3
FvH4_2g15760 Fragaria vesca HOM05D006294 ORTHO05D007668 3.4e-25 119.0 123 48.8
FAN24G2955 Fragaria x ananassa HOM05D006294 ORTHO05D007668 3.4e-25 119.0 123 48.8
CANSAT25G0635 Cannabis sativa HOM05D006294 ORTHO05D007668 5.8e-25 118.2 123 51.2
FAN20G2719 Fragaria x ananassa HOM05D006294 ORTHO05D007668 5.8e-25 118.2 123 48.8
FAN27G0563 Fragaria x ananassa HOM05D006294 ORTHO05D007668 5.8e-25 118.2 123 48.8
Phvul.007G017200 Phaseolus vulgaris HOM05D006294 ORTHO05D007668 3.8e-24 115.5 123 48.8
Thecc.02G053600 Theobroma cacao HOM05D006294 ORTHO05D007668 5.0e-24 115.2 123 48.0
Dinv41907 Davidia involucrata HOM05D006294 ORTHO05D007668 6.5e-24 114.8 124 47.6
arahy.Tifrunner.gnm1.ann1.VRB4HM Arachis hypogaea HOM05D006294 ORTHO05D007668 1.9e-23 113.2 65 86.2
Ciclev10028424m.g Citrus clementina HOM05D006294 ORTHO05D007668 2.5e-23 112.8 119 45.4
QL11p052544 Quercus lobata HOM05D006294 ORTHO05D007668 7.1e-23 111.3 118 45.8
FAN15G3675 Fragaria x ananassa HOM05D006294 ORTHO05D007668 9.3e-23 110.9 121 47.1
Medtr1g113720 Medicago truncatula HOM05D006294 ORTHO05D007668 4.6e-22 108.6 102 51.0
Actinidia18031 Actinidia chinensis HOM05D006294 ORTHO05D007668 1.0e-21 107.5 118 46.6
Cfa005297 Carpinus fangiana HOM05D006294 ORTHO05D007668 1.8e-21 106.7 111 46.8
arahy.Tifrunner.gnm1.ann1.D2HFCL Arachis hypogaea HOM05D006294 ORTHO05D007668 8.7e-21 104.4 103 58.3
Manes.04G070000 Manihot esculenta HOM05D006294 ORTHO05D007668 8.7e-21 104.4 117 42.7
Atru.BG.70.p Acer truncatum HOM05D006294 ORTHO05D007668 1.1e-20 104.0 118 42.4
Duzib052G0076 Durio zibethinus HOM05D006294 ORTHO05D007668 1.1e-20 104.0 118 44.1
Potri.009G139300 Populus trichocarpa HOM05D006294 ORTHO05D007668 1.1e-20 104.0 124 39.5
Sed0001766 Sechium edule HOM05D006294 ORTHO05D007668 1.5e-20 103.6 123 44.7
CSS0011609 Camellia sinensis var. sinensis HOM05D006294 ORTHO05D007668 1.9e-20 103.2 118 46.6
CSS0032021 Camellia sinensis var. sinensis HOM05D006294 ORTHO05D007668 1.9e-20 103.2 118 46.6
COL.COLO4_18015 Corchorus olitorius HOM05D006294 ORTHO05D007668 2.5e-20 102.8 123 40.7
Gohir.D02G227800 Gossypium hirsutum HOM05D006294 ORTHO05D007668 2.5e-20 102.8 124 40.3
Gorai.005G255600 Gossypium raimondii HOM05D006294 ORTHO05D007668 2.5e-20 102.8 124 40.3
Thhalv10022675m.g Eutrema salsugineum HOM05D006294 ORTHO05D007668 5.7e-20 101.7 117 42.7
Rhsim11G0194300 Rhododendron simsii HOM05D006294 ORTHO05D007668 9.7e-20 100.9 118 47.5
BcaB08g34688 Brassica carinata HOM05D006294 ORTHO05D007668 2.2e-19 99.8 117 43.6
BcaC01g02964 Brassica carinata HOM05D006294 ORTHO05D007668 2.2e-19 99.8 117 43.6
Carub.0003s3096 Capsella rubella HOM05D006294 ORTHO05D007668 2.2e-19 99.8 117 43.6
Carub.0135s0001 Capsella rubella HOM05D006294 ORTHO05D007668 2.2e-19 99.8 117 43.6
vmacro02296 Vaccinium macrocarpon HOM05D006294 ORTHO05D007668 2.8e-19 99.4 118 45.8
Hma1.2p1_0032F.1_g019100 Hydrangea macrophylla HOM05D006294 ORTHO05D007668 3.7e-19 99.0 117 41.0
AT2G17033 Arabidopsis thaliana HOM05D006294 ORTHO05D007668 4.8e-19 98.6 116 44.0
TWI79G1609 Tripterygium wilfordii HOM05D006294 ORTHO05D007668 4.8e-19 98.6 121 38.8
ClCG02G011140 Citrullus lanatus HOM05D006294 ORTHO05D007668 6.3e-19 98.2 123 45.5
arahy.Tifrunner.gnm1.ann1.YH938E Arachis hypogaea HOM05D006294 ORTHO05D007668 8.2e-19 97.8 87 62.1
A03p46230 Brassica napus HOM05D006294 ORTHO05D007668 8.2e-19 97.8 122 41.8
BraA03t13747Z Brassica rapa HOM05D006294 ORTHO05D007668 8.2e-19 97.8 122 41.8
MELO3C022147.2 Cucumis melo HOM05D006294 ORTHO05D007668 8.2e-19 97.8 123 43.9
Aa31LG8G14230 Aethionema arabicum HOM05D006294 ORTHO05D007668 1.4e-18 97.1 117 38.5
AL3G49850 Arabidopsis lyrata HOM05D006294 ORTHO05D007668 1.4e-18 97.1 117 42.7
CsaV3_5G039720 Cucumis sativus L. HOM05D006294 ORTHO05D007668 1.4e-18 97.1 118 43.2
C03p57830 Brassica napus HOM05D006294 ORTHO05D007668 1.8e-18 96.7 117 41.0
BolC3t18054H Brassica oleracea HOM05D006294 ORTHO05D007668 1.8e-18 96.7 117 41.0
PGR142G2258 Punica granatum HOM05D006294 ORTHO05D007668 2.4e-18 96.3 121 36.4
Sp3g30330 Schrenkiella parvula HOM05D006294 ORTHO05D007668 5.9e-17 91.7 117 41.0
PSO541G2965 Papaver somniferum HOM05D006294 ORTHO05D007668 1.7e-16 90.1 118 39.8
arahy.Tifrunner.gnm1.ann1.K1Y931 Arachis hypogaea HOM05D006294 ORTHO05D007668 3.8e-16 89.0 52 82.7
Lj5A175T99 Lonicera japonica HOM05D006294 ORTHO05D007668 3.8e-16 89.0 114 39.5
Cc09_g10390 Coffea canephora HOM05D006294 ORTHO05D007668 5.0e-16 88.6 119 38.7
HanXRQChr10g0300361 Helianthus annuus HOM05D006294 ORTHO05D007668 1.1e-15 87.4 119 37.8
GSVIVG01023965001 Vitis vinifera HOM05D006294 ORTHO05D007668 1.1e-15 87.4 99 42.4
Migut.B00046 Erythranthe guttata HOM05D006294 ORTHO05D007668 5.5e-15 85.1 118 33.9
ECA234G3875 Erigeron canadensis HOM05D006294 ORTHO05D007668 7.2e-15 84.7 113 38.9
Oeu045089.1 Olea europaea HOM05D006294 ORTHO05D007668 1.2e-14 84.0 112 36.6
Nn5g30865 Nelumbo nucifera HOM05D006294 ORTHO05D007668 2.7e-14 82.8 123 38.2
Sabra09G0107900 Salix brachista HOM05D006294 ORTHO05D007668 1.4e-13 80.5 106 37.7
Ah.11g046440 Amaranthus hybridus HOM05D006294 ORTHO05D007668 1.8e-13 80.1 111 35.1
Lsat_1_v5_gn_6_58781 Lactuca sativa HOM05D006294 ORTHO05D007668 2.0e-12 76.6 115 33.9
PSO675G2411 Papaver somniferum HOM05D006294 ORTHO05D007668 2.5e-12 76.3 112 38.4
Cpa.g.sc20.124 Carica papaya HOM05D006294 ORTHO05D007668 5.7e-12 75.1 93 43.0
Lsat_1_v5_gn_4_70040 Lactuca sativa HOM05D006294 ORTHO05D007668 9.7e-12 74.3 115 33.9
MSTRG.19967 Avicennia marina HOM05D006294 ORTHO05D007668 3.7e-11 72.4 95 37.9
Eucgr.I01461 Eucalyptus grandis HOM05D006294 ORTHO05D007668 1.1e-10 70.9 110 31.8
THA.LOC104819661 Tarenaya hassleriana HOM05D006294 ORTHO05D007668 1.1e-10 70.9 92 38.0
CARHR107360 Cardamine hirsuta HOM05D006294 ORTHO05D007668 1.8e-10 70.1 92 38.0
unitig_21.g20844 Utricularia gibba HOM05D006294 ORTHO05D007668 4.1e-10 68.9 118 32.2
Aqoxy6G01907 Aquilegia oxysepala HOM05D006294 ORTHO05D007668 1.2e-09 67.4 107 30.8
SalBow1G5734 Salvia bowleyana HOM05D006294 ORTHO05D007668 4.5e-09 65.5 114 30.7
arahy.Tifrunner.gnm1.ann1.QPA1DX Arachis hypogaea HOM05D006294 ORTHO05D007668 7.7e-09 64.7 44 75.0
Rhsim11G0078500 Rhododendron simsii HOM05D006294 ORTHO05D007668 1.3e-08 63.9 80 43.8
CDE05G1346 Ceratophyllum demersum HOM05D006294 ORTHO05D007668 5.0e-08 62.0 97 33.0
Nitab4.5_0016084g0010 Nicotiana tabacum HOM05D006294 ORTHO05D007668 5.0e-08 62.0 103 31.1
arahy.Tifrunner.gnm1.ann1.L9KWYC Arachis hypogaea HOM05D006294 ORTHO05D007668 1.4e-07 60.5 35 80.0
Sopen00g003210 Solanum pennellii HOM05D006294 ORTHO05D007668 1.4e-07 60.5 104 33.7
Solyc10g055700.2 Solanum lycopersicum HOM05D006294 ORTHO05D007668 2.5e-07 59.7 104 33.7
PGSC0003DMG400018933 Solanum tuberosum HOM05D006294 ORTHO05D007668 3.2e-07 59.3 103 32.0
arahy.Tifrunner.gnm1.ann1.F8RJMX Arachis hypogaea HOM05D043557 ORTHO05D007668 4.2e-07 58.9 51 64.7
Nitab4.5_0028029g0010 Nicotiana tabacum HOM05D006294 ORTHO05D007668 9.4e-07 57.8 107 29.9
Peaxi162Scf00042g01217 Petunia axillaris HOM05D006294 ORTHO05D007668 1.2e-06 57.4 124 31.5
MBI05_g12855_MAGBIO Magnolia biondii HOM05D006294 ORTHO05D007668 2.1e-06 56.6 111 31.5


User provided reference genes

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