Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.VLAW7V Arachis hypogaea HOM05D004356 ORTHO05D005542 5.8e-220 767.3 402 100.0
arahy.Tifrunner.gnm1.ann1.QY7301 Arachis hypogaea HOM05D004356 ORTHO05D005542 1.5e-215 752.7 402 95.0
arahy.Tifrunner.gnm1.ann1.JC6ZCB Arachis hypogaea HOM05D004356 ORTHO05D005542 3.4e-212 741.5 398 92.7
arahy.Tifrunner.gnm1.ann1.3Z7WCZ Arachis hypogaea HOM05D004356 ORTHO05D005542 4.5e-196 688.0 402 87.6
Phvul.008G178500 Phaseolus vulgaris HOM05D004356 ORTHO05D005542 2.3e-176 622.5 347 86.2
TPR.G16206 Trifolium pratense HOM05D004356 ORTHO05D005542 3.3e-175 618.6 341 88.6
Ca_19032_v3 Cicer arietinum L. HOM05D004356 ORTHO05D005542 5.7e-175 617.8 341 88.6
Lalb_Chr10g0102631 Lupinus albus HOM05D004356 ORTHO05D005542 6.3e-174 614.4 394 78.2
Glyma.14G178900 Glycine max HOM05D004356 ORTHO05D005542 8.2e-174 614.0 346 85.5
Psat2g068800 Pisum sativum HOM05D004356 ORTHO05D005542 1.8e-173 612.8 341 88.3
VMungo0647G1889 Vigna mungo HOM05D004356 ORTHO05D005542 4.1e-173 611.7 398 76.6
Lj1g0019049 Lotus japonicus HOM05D004356 ORTHO05D005542 9.1e-173 610.5 347 85.9
TPR.G30120 Trifolium pratense HOM05D004356 ORTHO05D005542 1.0e-171 607.1 341 86.8
Glyma.02G211300 Glycine max HOM05D004356 ORTHO05D005542 1.7e-171 606.3 403 74.9
Medtr5g065270 Medicago truncatula HOM05D004356 ORTHO05D005542 1.5e-170 603.2 405 75.8
MD15G1379800 Malus domestica HOM05D004356 ORTHO05D005542 4.4e-167 591.7 340 82.6
RcHm_v2.0_Chr1g0327751 Rosa chinensis HOM05D004356 ORTHO05D005542 4.4e-167 591.7 393 77.1
QL09p016893 Quercus lobata HOM05D004356 ORTHO05D005542 5.7e-167 591.3 406 73.2
COL.COLO4_11966 Corchorus olitorius HOM05D004356 ORTHO05D005542 9.7e-167 590.5 400 73.2
Lj1g0006758 Lotus japonicus HOM05D004356 ORTHO05D005542 1.8e-165 586.3 346 83.8
arahy.Tifrunner.gnm1.ann1.1YQ32R Arachis hypogaea HOM05D004356 ORTHO05D005542 2.4e-165 585.9 423 74.7
Sed0016629 Sechium edule HOM05D004356 ORTHO05D005542 3.1e-165 585.5 342 83.3
CANSAT21G1617 Cannabis sativa HOM05D004356 ORTHO05D005542 5.3e-165 584.7 408 72.8
FAN18G3440 Fragaria x ananassa HOM05D004356 ORTHO05D005542 9.1e-165 583.9 342 82.5
MELO3C011060.2 Cucumis melo HOM05D004356 ORTHO05D005542 1.6e-164 583.2 346 81.8
Atru.chr13.1064 Acer truncatum HOM05D004356 ORTHO05D005542 2.7e-164 582.4 342 81.3
Atru.chr13.1070 Acer truncatum HOM05D004356 ORTHO05D005542 2.7e-164 582.4 342 81.3
CsaV3_2G030020 Cucumis sativus L. HOM05D004356 ORTHO05D005542 3.5e-164 582.0 346 81.5
MD00G1136500 Malus domestica HOM05D004356 ORTHO05D005542 7.7e-164 580.9 340 81.5
RcHm_v2.0_Chr7g0237731 Rosa chinensis HOM05D004356 ORTHO05D005542 7.7e-164 580.9 393 74.6
FvH4_5g36000 Fragaria vesca HOM05D004356 ORTHO05D005542 2.2e-163 579.3 342 82.2
GSVIVG01009120001 Vitis vinifera HOM05D004356 ORTHO05D005542 5.0e-163 578.2 342 80.1
FAN04G0906 Fragaria x ananassa HOM05D004356 ORTHO05D005542 8.5e-163 577.4 342 81.6
TAR381G1323 Trochodendron aralioides HOM05D004356 ORTHO05D005542 1.5e-162 576.6 391 72.9
Duzib093G1902 Durio zibethinus HOM05D004356 ORTHO05D005542 4.2e-162 575.1 403 71.2
CSS0046210 Camellia sinensis var. sinensis HOM05D004356 ORTHO05D005542 2.1e-161 572.8 342 80.4
FAN08G0112 Fragaria x ananassa HOM05D004356 ORTHO05D005542 2.3e-160 569.3 369 76.4
Hund16880 Selenicereus undatus HOM05D004356 ORTHO05D005542 3.0e-160 568.9 334 81.4
Ciclev10001304m.g Citrus clementina HOM05D004356 ORTHO05D005542 4.0e-160 568.5 342 79.5
Actinidia33114 Actinidia chinensis HOM05D004356 ORTHO05D005542 5.2e-160 568.2 402 70.4
Gohir.A05G222100 Gossypium hirsutum HOM05D004356 ORTHO05D005542 6.8e-160 567.8 342 79.8
Nitab4.5_0004523g0040 Nicotiana tabacum HOM05D004356 ORTHO05D005542 1.2e-159 567.0 395 70.1
Aqoxy3G00172 Aquilegia oxysepala HOM05D004356 ORTHO05D005542 4.4e-159 565.1 397 70.0
CiPaw.16G056200 Carya illinoinensis HOM05D004356 ORTHO05D005542 4.4e-159 565.1 343 79.0
Dinv42649 Davidia involucrata HOM05D004356 ORTHO05D005542 4.4e-159 565.1 340 79.4
Solyc01g081300.4 Solanum lycopersicum HOM05D004356 ORTHO05D005542 7.5e-159 564.3 339 78.2
TWI56G1415 Tripterygium wilfordii HOM05D004356 ORTHO05D005542 7.5e-159 564.3 410 69.8
ECA247G0627 Erigeron canadensis HOM05D004356 ORTHO05D005542 9.8e-159 563.9 340 77.1
Gohir.D05G224800 Gossypium hirsutum HOM05D004356 ORTHO05D005542 1.3e-158 563.5 342 78.9
Haze_22357 Corylus avellana HOM05D004356 ORTHO05D005542 1.7e-158 563.1 379 73.1
Eucgr.F00397 Eucalyptus grandis HOM05D004356 ORTHO05D005542 1.7e-158 563.1 358 77.1
Sopen01g032880 Solanum pennellii HOM05D004356 ORTHO05D005542 1.7e-158 563.1 339 78.2
PGR102G1623 Punica granatum HOM05D004356 ORTHO05D005542 3.7e-158 562.0 397 70.0
CAN.G992.8 Capsicum annuum HOM05D004356 ORTHO05D005542 6.3e-158 561.2 345 77.7
PGSC0003DMG400001802 Solanum tuberosum HOM05D004356 ORTHO05D005542 8.3e-158 560.8 339 77.9
Gorai.009G232200 Gossypium raimondii HOM05D004356 ORTHO05D005542 1.1e-157 560.5 342 78.7
Nitab4.5_0001788g0020 Nicotiana tabacum HOM05D004356 ORTHO05D005542 1.1e-157 560.5 339 78.5
Manes.18G062300 Manihot esculenta HOM05D004356 ORTHO05D005542 1.8e-157 559.7 382 73.3
AUR62027839 Chenopodium quinoa HOM05D004356 ORTHO05D005542 5.4e-157 558.1 400 70.2
Peaxi162Scf00592g00454 Petunia axillaris HOM05D004356 ORTHO05D005542 1.2e-156 557.0 421 66.3
Cc10_g15440 Coffea canephora HOM05D004356 ORTHO05D005542 2.7e-156 555.8 340 77.6
Cc10_g15470 Coffea canephora HOM05D004356 ORTHO05D005542 3.5e-156 555.4 342 76.9
HanXRQChr02g0040341 Helianthus annuus HOM05D004356 ORTHO05D005542 4.5e-156 555.1 359 71.9
Aqoxy1G00182 Aquilegia oxysepala HOM05D004356 ORTHO05D005542 5.9e-156 554.7 339 77.6
Migut.M02007 Erythranthe guttata HOM05D004356 ORTHO05D005542 7.7e-156 554.3 342 77.2
Ah.05g170540 Amaranthus hybridus HOM05D004356 ORTHO05D005542 1.3e-155 553.5 339 77.6
Cc07_g18320 Coffea canephora HOM05D004356 ORTHO05D005542 1.3e-155 553.5 340 76.2
PSO675G0521 Papaver somniferum HOM05D004356 ORTHO05D005542 1.3e-155 553.5 334 78.4
SalBow8G3481 Salvia bowleyana HOM05D004356 ORTHO05D005542 1.3e-155 553.5 335 78.2
Oeu025262.1 Olea europaea HOM05D004356 ORTHO05D005542 2.9e-155 552.4 340 77.6
arahy.Tifrunner.gnm1.ann1.L8UQBM Arachis hypogaea HOM05D004356 ORTHO05D005542 8.5e-155 550.8 279 95.7
MSTRG.16368 Avicennia marina HOM05D004356 ORTHO05D005542 8.5e-155 550.8 340 75.9
PSO675G5075 Papaver somniferum HOM05D004356 ORTHO05D005542 8.5e-155 550.8 339 78.2
PSO017G1942 Papaver somniferum HOM05D004356 ORTHO05D005542 1.1e-154 550.4 336 77.7
vmacro04684 Vaccinium macrocarpon HOM05D004356 ORTHO05D005542 1.1e-154 550.4 423 66.7
Rhsim07G0209000 Rhododendron simsii HOM05D004356 ORTHO05D005542 1.9e-154 549.7 368 72.3
Lsat_1_v5_gn_1_2520 Lactuca sativa HOM05D004356 ORTHO05D005542 9.5e-154 547.4 399 66.9
EL10Ac9g21432 Beta vulgaris HOM05D000128 ORTHO05D005542 1.2e-153 547.0 347 76.4
THA.LOC104816870 Tarenaya hassleriana HOM05D004356 ORTHO05D005542 1.0e-152 543.9 340 75.0
SGA_v2.0_scaffold175G39331 Striga asiatica HOM05D004356 ORTHO05D005542 1.4e-152 543.5 339 76.1
CSS0005507 Camellia sinensis var. sinensis HOM05D004356 ORTHO05D005542 3.0e-152 542.3 342 77.2
Duzib106G0787 Durio zibethinus HOM05D004356 ORTHO05D005542 2.6e-151 539.3 341 77.4
ATR0022G038 Amborella trichopoda HOM05D004356 ORTHO05D005542 9.8e-151 537.3 336 75.9
unitig_37.g12048 Utricularia gibba HOM05D004356 ORTHO05D005542 1.7e-150 536.6 337 73.6
Carub.0003s2106 Capsella rubella HOM05D004356 ORTHO05D005542 2.2e-150 536.2 341 73.9
CARHR096940 Cardamine hirsuta HOM05D004356 ORTHO05D005542 2.8e-150 535.8 341 73.9
AL3G35050 Arabidopsis lyrata HOM05D004356 ORTHO05D005542 3.7e-150 535.4 341 73.9
Thhalv10020825m.g Eutrema salsugineum HOM05D004356 ORTHO05D005542 3.7e-150 535.4 341 73.9
AT3G21110 Arabidopsis thaliana HOM05D004356 ORTHO05D005542 4.9e-150 535.0 341 73.9
Zm00001eb284720 Zea mays HOM05D004356 ORTHO05D005542 6.3e-150 534.6 317 78.9
Carub.0003s2101 Capsella rubella HOM05D004356 ORTHO05D005542 1.1e-149 533.9 340 74.1
CDE04G0095 Ceratophyllum demersum HOM05D004356 ORTHO05D005542 1.1e-149 533.9 342 75.1
Os09g0467100 Oryza sativa ssp. japonica HOM05D004356 ORTHO05D005542 1.1e-149 533.9 317 79.2
A01p33740 Brassica napus HOM05D004356 ORTHO05D005542 2.4e-149 532.7 341 73.6
A03p42020 Brassica napus HOM05D004356 ORTHO05D005542 4.1e-149 531.9 342 74.0
BraA03t13356Z Brassica rapa HOM05D004356 ORTHO05D005542 9.2e-149 530.8 345 73.6
Thecc.08G065800 Theobroma cacao HOM05D004356 ORTHO05D005542 1.2e-148 530.4 298 84.6
BcaB04g19136 Brassica carinata HOM05D004356 ORTHO05D005542 1.6e-148 530.0 341 73.6
BraA01t03487Z Brassica rapa HOM05D004356 ORTHO05D005542 5.9e-148 528.1 345 73.0
BolC3t17429H Brassica oleracea HOM05D004356 ORTHO05D005542 2.3e-147 526.2 342 72.8
Cfa013712 Carpinus fangiana HOM05D004356 ORTHO05D005542 2.3e-147 526.2 342 75.7
Aa31LG8G7830 Aethionema arabicum HOM05D004356 ORTHO05D005542 3.8e-147 525.4 347 72.3
Dinv44826 Davidia involucrata HOM05D004356 ORTHO05D005542 1.2e-145 520.4 324 75.9
AUR62018997 Chenopodium quinoa HOM05D004356 ORTHO05D005542 4.7e-145 518.5 326 76.7
HPP92_011797 Vanilla planifolia HOM05D004356 ORTHO05D005542 2.0e-143 513.1 336 72.3
Sabra17G0038400 Salix brachista HOM05D004356 ORTHO05D005542 3.4e-143 512.3 349 73.1
Sabra17G0043000 Salix brachista HOM05D004356 ORTHO05D005542 3.4e-143 512.3 349 73.1
BcaB04g20611 Brassica carinata HOM05D004356 ORTHO05D005542 5.7e-143 511.5 341 71.6
Potri.017G051500 Populus trichocarpa HOM05D004356 ORTHO05D005542 1.3e-142 510.4 303 79.9
Prupe.1G526100 Prunus persica HOM05D004356 ORTHO05D005542 2.9e-142 509.2 283 84.5
Sabra17G0037700 Salix brachista HOM05D004356 ORTHO05D005542 1.1e-141 507.3 349 72.5
BcaC01g03528 Brassica carinata HOM05D004356 ORTHO05D004900 1.4e-141 506.9 324 73.1
Mapoly0044s0034 Marchantia polymorpha HOM05D004356 ORTHO05D005542 2.3e-139 499.6 334 69.8
Sp3g19060 Schrenkiella parvula HOM05D004356 ORTHO05D005542 2.1e-137 493.0 341 69.8
SEGI_03509 Sequoiadendron giganteum HOM05D004356 ORTHO05D005542 4.7e-137 491.9 344 69.8
C03p51440 Brassica napus HOM05D004356 ORTHO05D005542 4.0e-136 488.8 349 68.2
Pp3c23_9790 Physcomitrium patens HOM05D004356 ORTHO05D005542 4.0e-136 488.8 317 71.3
Carub.0043s0008 Capsella rubella HOM05D004356 ORTHO05D005542 1.5e-135 486.9 298 75.8
AagrBONN_evm.TU.Sc2ySwM_344.5470 Anthoceros agrestis HOM05D004356 ORTHO05D005542 1.7e-134 483.4 314 70.1
C01p43120 Brassica napus HOM05D004356 ORTHO05D005542 2.2e-134 483.0 303 75.2
BolC1t04259H Brassica oleracea HOM05D004356 ORTHO05D005542 2.2e-134 483.0 303 75.2
SMO340G0097 Selaginella moellendorffii HOM05D004356 ORTHO05D005542 4.6e-132 475.3 335 67.8
Carub.0043s0006 Capsella rubella HOM05D004356 ORTHO05D005542 7.3e-130 468.0 341 67.7
arahy.Tifrunner.gnm1.ann1.PGQR8U Arachis hypogaea HOM05D004356 ORTHO05D005542 9.8e-127 457.6 398 67.3
CBR_g27760 Chara braunii HOM05D004356 ORTHO05D005542 1.3e-126 457.2 319 66.1
Sc23g0000510 Simmondsia chinensis HOM05D004356 ORTHO05D005542 5.1e-123 445.3 265 80.0
Carub.0043s0010 Capsella rubella HOM05D004356 ORTHO05D005542 2.3e-120 436.4 326 66.0
Lj4C732G13 Lonicera japonica HOM05D004356 ORTHO05D005542 1.7e-118 430.3 373 61.1
SHI20358 Sapria himalayana HOM05D004356 ORTHO05D005542 7.3e-114 414.8 325 62.8
Cre03.g202113 Chlamydomonas reinhardtii HOM05D004356 ORTHO05D005542 2.6e-111 406.4 313 60.1
Cpa.g.sc198.38 Carica papaya HOM05D004356 ORTHO05D005542 5.6e-106 388.7 263 71.5
PRCOL_00002575 Prasinoderma coloniale HOM05D004356 ORTHO05D005542 2.1e-105 386.7 301 61.5
MCO12G379 Micromonas commoda HOM05D004356 ORTHO05D005542 9.0e-104 381.3 314 58.3
Gohir.A05G222001 Gossypium hirsutum HOM05D004356 ORTHO05D005542 2.2e-102 376.7 270 71.1
CiPaw.16G030800 Carya illinoinensis HOM05D004356 ORTHO05D005542 1.2e-95 354.4 275 64.7
Actinidia29604 Actinidia chinensis HOM05D004356 ORTHO05D005542 1.8e-83 313.9 188 77.7
arahy.Tifrunner.gnm1.ann1.F3AJY4 Arachis hypogaea HOM05D004356 ORTHO05D005542 4.3e-82 309.3 185 88.6
arahy.Tifrunner.gnm1.ann1.HK5GW2 Arachis hypogaea HOM05D004356 ORTHO05D005542 1.6e-81 307.4 271 65.7
ClCG00G002050 Citrullus lanatus HOM05D004356 ORTHO05D005542 2.0e-79 300.4 183 79.2
Nn1g08498 Nelumbo nucifera HOM05D004356 ORTHO05D005542 4.5e-79 299.3 244 64.8
arahy.Tifrunner.gnm1.ann1.FASD2W Arachis hypogaea HOM05D004356 ORTHO05D005542 1.3e-78 297.7 185 87.0
arahy.Tifrunner.gnm1.ann1.MUPT6T Arachis hypogaea HOM05D004356 ORTHO05D005542 1.3e-78 297.7 185 87.0
arahy.Tifrunner.gnm1.ann1.F88CCI Arachis hypogaea HOM05D004356 ORTHO05D005542 8.5e-78 295.0 335 54.9
ClCG08G011430 Citrullus lanatus HOM05D004356 ORTHO05D005542 7.4e-74 282.0 163 83.4
Nn1g08495 Nelumbo nucifera HOM05D004356 ORTHO05D005542 8.2e-73 278.5 157 82.8
RcHm_v2.0_Chr3g0491851 Rosa chinensis HOM05D004356 ORTHO05D005542 3.1e-72 276.6 275 55.6
arahy.Tifrunner.gnm1.ann1.X0GHYT Arachis hypogaea HOM05D004356 ORTHO05D005542 9.4e-69 265.0 235 63.8
Carub.0516s0001 Capsella rubella HOM05D004356 ORTHO05D005542 9.1e-64 248.4 145 75.9
DCAR_012871 Daucus carota HOM05D004356 ORTHO05D005542 1.8e-59 234.2 303 44.6
arahy.Tifrunner.gnm1.ann1.D1TUAT Arachis hypogaea HOM05D004356 ORTHO05D005542 2.0e-55 220.7 131 87.0
Psat0s4321g0120 Pisum sativum HOM05D004356 ORTHO05D005542 1.1e-48 198.4 116 81.9
arahy.Tifrunner.gnm1.ann1.6VP8YS Arachis hypogaea HOM05D004356 ORTHO05D005542 2.7e-47 193.7 122 83.6
arahy.Tifrunner.gnm1.ann1.H4UIY2 Arachis hypogaea HOM05D004356 ORTHO05D005542 1.8e-40 171.0 303 45.5
arahy.Tifrunner.gnm1.ann1.JXGW17 Arachis hypogaea HOM05D004356 ORTHO05D005542 1.8e-40 171.0 303 45.5
EL10As8g23848 Beta vulgaris HOM05D004356 ORTHO05D090264 6.6e-30 136.0 234 37.6
Cfa024383 Carpinus fangiana HOM05D004356 ORTHO05D124745 3.3e-21 107.1 169 37.9
Zm00001eb297900 Zea mays HOM05D004356 ORTHO05D005542 3.4e-18 97.1 53 77.4
Zm00001eb297960 Zea mays HOM05D004356 ORTHO05D444542 3.4e-18 97.1 53 77.4
arahy.Tifrunner.gnm1.ann1.8IDC4C Arachis hypogaea HOM05D004356 ORTHO05D005542 1.3e-17 95.1 51 92.2
arahy.Tifrunner.gnm1.ann1.E3H3WY Arachis hypogaea HOM05D000075 ORTHO05D000073 6.2e-12 76.3 44 90.9
arahy.Tifrunner.gnm1.ann1.J07EWC Arachis hypogaea HOM05D004356 ORTHO05D005542 8.1e-12 75.9 42 90.5
arahy.Tifrunner.gnm1.ann1.03U3FR Arachis hypogaea HOM05D036434 ORTHO05D085949 1.1e-11 75.5 56 75.0
arahy.Tifrunner.gnm1.ann1.E7EHDM Arachis hypogaea HOM05D036434 ORTHO05D085916 1.1e-11 75.5 56 75.0
SHI20361 Sapria himalayana HOM05D004356 ORTHO05D365714 2.1e-07 61.2 47 59.6


User provided reference genes

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