Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.VAE2IM Arachis hypogaea HOM05D005864 ORTHO05D006770 5.3e-287 990.3 507 100.0
arahy.Tifrunner.gnm1.ann1.UG5YAZ Arachis hypogaea HOM05D005864 ORTHO05D006770 1.1e-228 796.6 572 76.7
Lj3g0027429 Lotus japonicus HOM05D005864 ORTHO05D006770 8.8e-157 557.8 500 62.2
Lalb_Chr19g0135701 Lupinus albus HOM05D005864 ORTHO05D006770 5.4e-146 521.9 498 60.6
Psat7g195480 Pisum sativum HOM05D005864 ORTHO05D006770 2.3e-136 490.0 501 58.7
Glyma.06G306800 Glycine max HOM05D005864 ORTHO05D006770 6.6e-136 488.4 497 58.4
Phvul.011G106100 Phaseolus vulgaris HOM05D005864 ORTHO05D006770 4.7e-134 482.3 497 57.9
Medtr4g046697 Medicago truncatula HOM05D005864 ORTHO05D006770 3.4e-132 476.1 499 57.5
VMungo1127G2082 Vigna mungo HOM05D005864 ORTHO05D006770 9.5e-127 458.0 497 55.1
Glyma.12G101400 Glycine max HOM05D005864 ORTHO05D006770 1.4e-125 454.1 497 54.7
Ca_19101_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 2.8e-110 403.3 470 55.3
TPR.G19040 Trifolium pratense HOM05D005864 ORTHO05D006770 1.2e-97 361.3 475 51.4
CiPaw.03G162800 Carya illinoinensis HOM05D005864 ORTHO05D006770 1.3e-94 351.3 513 46.6
QL08p033779 Quercus lobata HOM05D005864 ORTHO05D006770 4.8e-94 349.4 512 46.9
CiPaw.04G117700 Carya illinoinensis HOM05D005864 ORTHO05D006770 7.9e-89 332.0 513 44.6
GSVIVG01030622001 Vitis vinifera HOM05D005864 ORTHO05D006770 2.6e-84 317.0 504 42.9
Haze_12896 Corylus avellana HOM05D005864 ORTHO05D006770 5.9e-76 289.3 537 40.4
Nn1g07000 Nelumbo nucifera HOM05D005864 ORTHO05D006770 1.7e-75 287.7 506 40.9
Dinv39688 Davidia involucrata HOM05D005864 ORTHO05D006770 4.6e-73 279.6 513 39.2
Hma1.2p1_0613F.1_g189160 Hydrangea macrophylla HOM05D005864 ORTHO05D006770 5.1e-72 276.2 507 40.0
MELO3C018803.2 Cucumis melo HOM05D005864 ORTHO05D006770 4.8e-70 269.6 508 40.7
TWI36G0516 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 4.8e-70 269.6 529 39.3
Atru.chr6.3147 Acer truncatum HOM05D005864 ORTHO05D006770 1.1e-69 268.5 501 37.3
Cpa.g.sc8.234 Carica papaya HOM05D005864 ORTHO05D006770 1.1e-69 268.5 514 38.9
Prupe.3G220100 Prunus persica HOM05D005864 ORTHO05D006770 1.8e-69 267.7 506 39.1
Thecc.02G162100 Theobroma cacao HOM05D005864 ORTHO05D006770 2.6e-68 263.8 516 38.2
TWI75G1887 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 2.2e-67 260.8 292 50.0
Potri.007G121700 Populus trichocarpa HOM05D005864 ORTHO05D006770 8.5e-67 258.8 514 39.5
FvH4_6g43530 Fragaria vesca HOM05D005864 ORTHO05D006770 2.7e-65 253.8 503 37.4
CsaV3_7G003760 Cucumis sativus L. HOM05D005864 ORTHO05D006770 1.5e-63 248.1 508 38.6
Duzib052G0164 Durio zibethinus HOM05D005864 ORTHO05D006770 4.8e-62 243.0 518 36.9
Sc21g0001650 Simmondsia chinensis HOM05D005864 ORTHO05D006770 1.4e-61 241.5 523 36.7
Dinv18530 Davidia involucrata HOM05D005864 ORTHO05D006770 1.2e-60 238.4 295 48.1
FAN14G4164 Fragaria x ananassa HOM05D005864 ORTHO05D006770 5.0e-59 233.0 522 35.2
CDE05G3135 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 7.2e-58 229.2 513 35.7
Actinidia12503 Actinidia chinensis HOM05D005864 ORTHO05D006770 5.1e-56 223.0 502 34.1
HPP92_002197 Vanilla planifolia HOM05D005864 ORTHO05D006770 5.7e-55 219.5 514 34.4
SHI10272 Sapria himalayana HOM05D005864 ORTHO05D006770 3.7e-54 216.9 305 45.6
FAN09G3055 Fragaria x ananassa HOM05D005864 ORTHO05D006770 8.2e-54 215.7 508 35.6
ClCG02G001780 Citrullus lanatus HOM05D005864 ORTHO05D006770 1.4e-53 214.9 565 34.3
FAN05G0568 Fragaria x ananassa HOM05D005864 ORTHO05D006770 2.4e-53 214.2 502 35.7
SalBow7G0586 Salvia bowleyana HOM05D005864 ORTHO05D006770 4.1e-53 213.4 517 34.2
Eucgr.K00811 Eucalyptus grandis HOM05D005864 ORTHO05D006770 9.1e-53 212.2 255 49.4
Gohir.A03G163800 Gossypium hirsutum HOM05D005864 ORTHO05D006770 2.6e-52 210.7 513 33.1
Nitab4.5_0000631g0060 Nicotiana tabacum HOM05D005864 ORTHO05D006770 5.9e-52 209.5 299 44.5
Eucgr.K00844 Eucalyptus grandis HOM05D005864 ORTHO05D006770 5.0e-51 206.5 255 48.6
HanXRQChr07g0191611 Helianthus annuus HOM05D005864 ORTHO05D006770 1.1e-50 205.3 535 32.5
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-50 203.8 520 33.7
Ciclev10015598m.g Citrus clementina HOM05D005864 ORTHO05D006770 7.2e-50 202.6 280 44.6
PGR142G4274 Punica granatum HOM05D005864 ORTHO05D006770 7.2e-50 202.6 271 46.1
Sed0014520 Sechium edule HOM05D005864 ORTHO05D006770 1.2e-49 201.8 437 38.4
THA.LOC104809073 Tarenaya hassleriana HOM05D005864 ORTHO05D006770 4.7e-49 199.9 450 35.6
MSTRG.6547 Avicennia marina HOM05D005864 ORTHO05D006770 1.8e-48 198.0 517 31.9
Manes.12G077600 Manihot esculenta HOM05D005864 ORTHO05D006770 1.8e-48 198.0 472 37.1
CAN.G80.20 Capsicum annuum HOM05D005864 ORTHO05D006770 2.3e-48 197.6 538 33.3
Gohir.D02G187200 Gossypium hirsutum HOM05D005864 ORTHO05D006770 5.2e-48 196.4 504 31.3
Cc05_g05040 Coffea canephora HOM05D005864 ORTHO05D006770 4.4e-47 193.4 533 32.6
Os02g0161200 Oryza sativa ssp. japonica HOM05D005864 ORTHO05D006770 4.8e-46 189.9 506 31.8
Lsat_1_v5_gn_3_43700 Lactuca sativa HOM05D005864 ORTHO05D006770 6.3e-46 189.5 314 42.0
Sed0020795 Sechium edule HOM05D005864 ORTHO05D006770 1.4e-45 188.3 504 34.7
PSO675G8332 Papaver somniferum HOM05D005864 ORTHO05D006770 1.8e-45 188.0 511 32.7
Aqoxy4G02070 Aquilegia oxysepala HOM05D005864 ORTHO05D006770 9.1e-45 185.7 520 30.2
RcHm_v2.0_Chr2g0160051 Rosa chinensis HOM05D005864 ORTHO05D006770 1.2e-44 185.3 217 46.1
Solyc12g005770.3 Solanum lycopersicum HOM05D005864 ORTHO05D006770 2.7e-44 184.1 547 30.9
Oeu041940.1 Olea europaea HOM05D005864 ORTHO05D006770 1.0e-43 182.2 589 31.9
Zm00001eb207650 Zea mays HOM05D005864 ORTHO05D006770 2.9e-43 180.6 507 32.0
COL.COLO4_12982 Corchorus olitorius HOM05D005864 ORTHO05D006770 8.5e-43 179.1 464 34.9
SGA_v2.0_scaffold70G23416 Striga asiatica HOM05D005864 ORTHO05D006770 8.5e-43 179.1 502 31.7
Nitab4.5_0006207g0020 Nicotiana tabacum HOM05D005864 ORTHO05D006770 1.9e-42 177.9 532 31.6
FAN02G2067 Fragaria x ananassa HOM05D005864 ORTHO05D006770 3.2e-42 177.2 457 34.4
TAR624G1226 Trochodendron aralioides HOM05D005864 ORTHO05D006770 4.2e-42 176.8 371 37.7
Sabra07G0098400 Salix brachista HOM05D005864 ORTHO05D006770 6.1e-41 172.9 471 34.6
CDE05G1184 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 8.0e-41 172.6 470 34.0
unitig_699.g19613 Utricularia gibba HOM05D005864 ORTHO05D006770 1.0e-40 172.2 516 29.5
Ca_27661_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 4.0e-40 170.2 164 59.8
Ca_27662_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 4.0e-40 170.2 164 59.8
Sp3g19810 Schrenkiella parvula HOM05D005864 ORTHO05D006770 6.8e-40 169.5 269 42.0
ATR0794G118 Amborella trichopoda HOM05D005864 ORTHO05D006770 8.8e-40 169.1 532 31.8
Thhalv10020800m.g Eutrema salsugineum HOM05D005864 ORTHO05D006770 1.5e-39 168.3 253 42.7
PSO541G3214 Papaver somniferum HOM05D005864 ORTHO05D006770 3.4e-39 167.2 551 29.6
Sopen12g001690 Solanum pennellii HOM05D005864 ORTHO05D006770 3.4e-39 167.2 533 30.2
AL3G35960 Arabidopsis lyrata HOM05D005864 ORTHO05D006770 5.7e-39 166.4 303 37.3
CARHR097800 Cardamine hirsuta HOM05D005864 ORTHO05D006770 2.4e-37 161.0 303 37.3
Aa31LG8G8400 Aethionema arabicum HOM05D005864 ORTHO05D006770 7.0e-37 159.5 512 30.1
AT3G21810 Arabidopsis thaliana HOM05D005864 ORTHO05D006770 7.0e-37 159.5 314 36.3
Migut.M00396 Erythranthe guttata HOM05D005864 ORTHO05D006770 1.3e-35 155.2 274 38.0
A01p33130 Brassica napus HOM05D005864 ORTHO05D006770 1.9e-34 151.4 303 37.0
BcaC09g49121 Brassica carinata HOM05D005864 ORTHO05D006770 2.5e-34 151.0 297 36.0
BcaB04g20556 Brassica carinata HOM05D005864 ORTHO05D006770 4.2e-34 150.2 298 37.2
Peaxi162Scf00012g03212 Petunia axillaris HOM05D005864 ORTHO05D006770 1.0e-32 145.6 540 29.1
BolC1t04192H Brassica oleracea HOM05D005864 ORTHO05D006770 4.0e-32 143.7 297 35.0
unitig_85.g27303 Utricularia gibba HOM05D005864 ORTHO05D006770 1.2e-31 142.1 502 27.1
AUR62025062 Chenopodium quinoa HOM05D005864 ORTHO05D006770 1.5e-31 141.7 610 26.9
AUR62037142 Chenopodium quinoa HOM05D005864 ORTHO05D006770 4.4e-31 140.2 467 30.0
MD09G1105200 Malus domestica HOM05D005864 ORTHO05D006770 1.6e-28 131.7 471 29.7
BraA01t03436Z Brassica rapa HOM05D005864 ORTHO05D006770 2.0e-28 131.3 311 34.7
Gorai.005G209600 Gossypium raimondii HOM05D005864 ORTHO05D006770 2.0e-28 131.3 407 29.5
TAR626G1271 Trochodendron aralioides HOM05D005864 ORTHO05D006770 7.7e-28 129.4 144 50.7
DCAR_021187 Daucus carota HOM05D005864 ORTHO05D006770 3.8e-27 127.1 419 30.8
PGSC0003DMG401024331 Solanum tuberosum HOM05D005864 ORTHO05D006770 8.6e-27 125.9 434 30.4
vmacro12226 Vaccinium macrocarpon HOM05D005864 ORTHO05D006770 7.3e-26 122.9 555 30.1
Actinidia32077 Actinidia chinensis HOM05D005864 ORTHO05D006770 2.8e-25 120.9 414 30.4
SEGI_09449 Sequoiadendron giganteum HOM05D005864 ORTHO05D006770 1.0e-24 119.0 263 34.6
Rhsim06G0158200 Rhododendron simsii HOM05D005864 ORTHO05D006770 5.7e-23 113.2 535 26.4
C01p42370 Brassica napus HOM05D005864 ORTHO05D006770 1.3e-22 112.1 318 30.8
Mapoly0099s0053 Marchantia polymorpha HOM05D005864 ORTHO05D006770 6.4e-22 109.8 278 33.8
Carub.0003s2189 Capsella rubella HOM05D005864 ORTHO05D006770 1.7e-19 101.7 245 31.8
FAN09G4739 Fragaria x ananassa HOM05D005864 ORTHO05D006770 2.3e-19 101.3 88 55.7
Zm00001eb273610 Zea mays HOM05D005864 ORTHO05D006770 1.2e-17 95.5 241 32.8
EL10Ac9g20653 Beta vulgaris HOM05D005864 ORTHO05D006770 4.0e-16 90.5 515 27.8
TPR.G1791 Trifolium pratense HOM05D005864 ORTHO05D006770 6.8e-16 89.7 70 71.4
AagrBONN_evm.TU.Sc2ySwM_369.130 Anthoceros agrestis HOM05D005864 ORTHO05D006770 4.4e-15 87.0 238 33.2
CSS0029042 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 8.3e-14 82.8 236 32.2
Ah.01g003700 Amaranthus hybridus HOM05D005864 ORTHO05D006770 1.4e-13 82.0 466 24.7
TAR626G0331 Trochodendron aralioides HOM05D005864 ORTHO05D006770 3.2e-13 80.9 70 60.0
Pp3c11_20880 Physcomitrium patens HOM05D005864 ORTHO05D006770 8.6e-11 72.8 300 28.3
Zm00001eb225260 Zea mays HOM05D005864 ORTHO05D006770 1.5e-10 72.0 132 34.8
CDE05G1677 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 3.6e-09 67.4 45 62.2
Pp3c7_5470 Physcomitrium patens HOM05D005864 ORTHO05D006770 3.4e-07 60.8 264 27.7
Lsat_1_v5_gn_9_59080 Lactuca sativa HOM05D005864 ORTHO05D006770 5.8e-07 60.1 134 34.3
RcHm_v2.0_Chr2g0160061 Rosa chinensis HOM05D005864 ORTHO05D006770 3.7e-06 57.4 151 34.4
TAR375G0046 Trochodendron aralioides HOM05D005864 ORTHO05D006770 3.7e-06 57.4 48 52.1
Hund01249 Selenicereus undatus HOM05D005864 ORTHO05D006770 6.4e-06 56.6 113 36.3
TAR372G0002 Trochodendron aralioides HOM05D005864 ORTHO05D006770 8.3e-06 56.2 48 52.1


User provided reference genes

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