Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.V8UVVM Arachis hypogaea HOM05D005577 ORTHO05D086716 3.0e-23 110.9 54 100.0
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 3.9e-10 67.4 43 74.4
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 3.9e-10 67.4 43 74.4
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 2.8e-08 61.2 43 65.1
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 1.8e-07 58.5 43 65.1
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 1.8e-07 58.5 43 60.5
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 1.8e-07 58.5 43 60.5
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 1.8e-07 58.5 43 60.5
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 1.8e-07 58.5 43 62.8
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 5.2e-07 57.0 43 60.5
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 5.2e-07 57.0 43 62.8
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 5.2e-07 57.0 43 62.8
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 6.8e-07 56.6 43 60.5
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 6.8e-07 56.6 43 62.8
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 6.8e-07 56.6 43 60.5
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 6.8e-07 56.6 43 65.1
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 6.8e-07 56.6 43 65.1
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 6.8e-07 56.6 43 62.8
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 8.9e-07 56.2 43 58.1
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 8.9e-07 56.2 55 50.9
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 8.9e-07 56.2 43 60.5
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 1.2e-06 55.8 43 60.5
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 1.5e-06 55.5 43 58.1
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 2.0e-06 55.1 43 55.8
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 2.0e-06 55.1 43 55.8
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 2.6e-06 54.7 43 55.8
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 2.6e-06 54.7 43 58.1
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 2.6e-06 54.7 43 58.1
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 2.6e-06 54.7 43 58.1
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 2.6e-06 54.7 43 58.1
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 2.6e-06 54.7 43 60.5
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 2.6e-06 54.7 43 55.8
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 3.4e-06 54.3 43 55.8
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 3.4e-06 54.3 43 58.1
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 3.4e-06 54.3 43 58.1
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 3.4e-06 54.3 43 58.1
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 4.4e-06 53.9 43 53.5
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 5.8e-06 53.5 43 55.8
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 5.8e-06 53.5 43 55.8
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 5.8e-06 53.5 43 53.5
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 5.8e-06 53.5 43 55.8
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 5.8e-06 53.5 43 55.8
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 5.8e-06 53.5 43 58.1
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 7.5e-06 53.1 43 55.8
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 7.5e-06 53.1 43 55.8
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 7.5e-06 53.1 43 55.8
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 9.8e-06 52.8 43 53.5


User provided reference genes

Program Settings