Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.V70XEM Arachis hypogaea HOM05D064469 ORTHO05D005763 1.9e-42 175.6 102 100.0
arahy.Tifrunner.gnm1.ann1.4VA7BX Arachis hypogaea HOM05D064469 ORTHO05D005763 1.3e-38 162.9 102 88.2
arahy.Tifrunner.gnm1.ann1.5E44W3 Arachis hypogaea HOM05D008132 ORTHO05D005763 2.7e-12 75.5 116 51.7
Lalb_Chr04g0258791 Lupinus albus HOM05D021502 ORTHO05D005763 1.6e-09 66.2 108 41.7
Nn1g09275 Nelumbo nucifera HOM05D008132 ORTHO05D005763 1.6e-09 66.2 134 48.5
Medtr5g084330 Medicago truncatula HOM05D009657 ORTHO05D005763 2.1e-09 65.9 122 46.7
Cpa.g.sc132.70 Carica papaya HOM05D008132 ORTHO05D005763 8.0e-09 63.9 107 52.3
Cpa.g.sc132.73 Carica papaya HOM05D008132 ORTHO05D005763 8.0e-09 63.9 107 52.3
LjContig00357g0014262 Lotus japonicus HOM05D009657 ORTHO05D005763 2.3e-08 62.4 127 49.6
QL08p029862 Quercus lobata HOM05D008132 ORTHO05D005763 3.1e-08 62.0 135 47.4
Oeu022674.1 Olea europaea HOM05D008132 ORTHO05D005763 4.0e-08 61.6 127 43.3
EL10Ac9g22778 Beta vulgaris HOM05D008132 ORTHO05D005763 8.9e-08 60.5 133 46.6
Glyma.14G051900 Glycine max HOM05D016758 ORTHO05D005763 8.9e-08 60.5 122 50.0
BraA03t13597Z Brassica rapa HOM05D008158 ORTHO05D010323 1.2e-07 60.1 39 66.7
MSTRG.9649 Avicennia marina HOM05D008132 ORTHO05D005763 1.5e-07 59.7 117 51.3
Phvul.008G216600 Phaseolus vulgaris HOM05D016758 ORTHO05D005763 1.5e-07 59.7 127 46.5
LjContig00357g0002258 Lotus japonicus HOM05D016758 ORTHO05D005763 3.4e-07 58.5 101 52.5
Thhalv10002728m.g Eutrema salsugineum HOM05D008158 ORTHO05D010323 4.4e-07 58.2 54 72.2
C03p55470 Brassica napus HOM05D008158 ORTHO05D010323 7.5e-07 57.4 123 48.0
Nn1g09274 Nelumbo nucifera HOM05D008132 ORTHO05D005763 9.8e-07 57.0 130 46.9
GSVIVG01030407001 Vitis vinifera HOM05D008132 ORTHO05D005763 9.8e-07 57.0 39 71.8
arahy.Tifrunner.gnm1.ann1.UXSD6Z Arachis hypogaea HOM05D053588 ORTHO05D005763 3.7e-06 55.1 56 67.9
BcaB08g34503 Brassica carinata HOM05D008158 ORTHO05D010323 3.7e-06 55.1 131 45.0
Peaxi162Scf00286g00091 Petunia axillaris HOM05D016138 ORTHO05D005763 3.7e-06 55.1 36 69.4
RcHm_v2.0_Chr2g0157371 Rosa chinensis HOM05D019965 ORTHO05D005763 8.3e-06 53.9 116 47.4


User provided reference genes

Program Settings