Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.GHK1U8 Arachis hypogaea HOM05D006803 ORTHO05D008552 2.5e-95 352.1 170 100.0
arahy.Tifrunner.gnm1.ann1.V6YLC6 Arachis hypogaea HOM05D006803 ORTHO05D008552 2.5e-95 352.1 170 100.0
Lalb_Chr01g0009661 Lupinus albus HOM05D006803 ORTHO05D008552 9.1e-66 253.8 182 74.7
TPR.G36689 Trifolium pratense HOM05D006803 ORTHO05D008552 4.2e-63 245.0 181 71.8
Ca_19336_v3 Cicer arietinum L. HOM05D006803 ORTHO05D008552 7.2e-63 244.2 175 73.7
Lj2g0024519 Lotus japonicus HOM05D006803 ORTHO05D008552 5.2e-61 238.0 172 70.9
Psat1g097000 Pisum sativum HOM05D006803 ORTHO05D008552 1.4e-58 229.9 176 71.0
Medtr6g034205 Medicago truncatula HOM05D006803 ORTHO05D008552 9.2e-58 227.3 174 71.3
Phvul.004G101300 Phaseolus vulgaris HOM05D006803 ORTHO05D008552 6.6e-56 221.1 173 67.6
Glyma.09G125800 Glycine max HOM05D006803 ORTHO05D008552 1.9e-55 219.5 174 67.8
VMungo0464G0281 Vigna mungo HOM05D006803 ORTHO05D008552 3.3e-55 218.8 170 68.2
Ciclev10006070m.g Citrus clementina HOM05D006803 ORTHO05D008552 4.7e-54 214.9 173 63.0
Sed0009140 Sechium edule HOM05D006803 ORTHO05D008552 2.3e-53 212.6 137 75.9
Atru.chr1.293 Acer truncatum HOM05D006803 ORTHO05D008552 8.9e-53 210.7 184 60.3
Hma1.2p1_0327F.1_g126650 Hydrangea macrophylla HOM05D006803 ORTHO05D008552 1.5e-52 209.9 179 64.2
Potri.012G033700 Populus trichocarpa HOM05D006803 ORTHO05D008552 4.4e-52 208.4 176 64.8
QL09p011586 Quercus lobata HOM05D006803 ORTHO05D008552 4.4e-52 208.4 149 70.5
COL.COLO4_07418 Corchorus olitorius HOM05D006803 ORTHO05D008552 5.7e-52 208.0 172 64.0
Glyma.16G172700 Glycine max HOM05D006803 ORTHO05D008552 5.7e-52 208.0 173 64.2
ClCG05G008590 Citrullus lanatus HOM05D006803 ORTHO05D008552 1.7e-51 206.5 138 75.4
MELO3C006968.2 Cucumis melo HOM05D006803 ORTHO05D008552 4.9e-51 204.9 132 77.3
Hund11694 Selenicereus undatus HOM05D006803 ORTHO05D008552 6.4e-51 204.5 156 66.0
vmacro06587 Vaccinium macrocarpon HOM05D006803 ORTHO05D008552 6.4e-51 204.5 180 60.6
Thhalv10014833m.g Eutrema salsugineum HOM05D006803 ORTHO05D008552 8.3e-51 204.1 126 77.8
Sopen03g003500 Solanum pennellii HOM05D006803 ORTHO05D008552 8.3e-51 204.1 174 61.5
Gohir.D08G108400 Gossypium hirsutum HOM05D006803 ORTHO05D008552 1.1e-50 203.8 154 67.5
Gorai.004G116000 Gossypium raimondii HOM05D006803 ORTHO05D008552 1.1e-50 203.8 154 67.5
Manes.14G019756 Manihot esculenta HOM05D006803 ORTHO05D008552 1.4e-50 203.4 173 61.3
TWI14G0759 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 1.4e-50 203.4 159 67.9
Thecc.03G190700 Theobroma cacao HOM05D006803 ORTHO05D008552 1.8e-50 203.0 168 63.1
Duzib084G0216 Durio zibethinus HOM05D006803 ORTHO05D008552 3.2e-50 202.2 168 61.9
RcHm_v2.0_Chr1g0379821 Rosa chinensis HOM05D006803 ORTHO05D008552 4.1e-50 201.8 122 74.6
C09p42680 Brassica napus HOM05D006803 ORTHO05D008552 5.4e-50 201.4 128 77.3
BolC9t57144H Brassica oleracea HOM05D006803 ORTHO05D008552 5.4e-50 201.4 128 77.3
BraA10t43128Z Brassica rapa HOM05D006803 ORTHO05D008552 5.4e-50 201.4 128 78.1
Cpa.g.sc3.33 Carica papaya HOM05D006803 ORTHO05D008552 7.0e-50 201.1 158 65.8
Solyc03g007540.3 Solanum lycopersicum HOM05D006803 ORTHO05D008552 7.0e-50 201.1 174 60.3
A10p10450 Brassica napus HOM05D006803 ORTHO05D008552 9.2e-50 200.7 126 78.6
PGSC0003DMG400009065 Solanum tuberosum HOM05D006803 ORTHO05D008552 1.6e-49 199.9 174 60.9
unitig_37.g11977 Utricularia gibba HOM05D000211 ORTHO05D002285 1.6e-49 199.9 135 71.9
Aa31LG3G9190 Aethionema arabicum HOM05D006803 ORTHO05D008552 2.7e-49 199.1 126 76.2
Dinv28351 Davidia involucrata HOM05D006803 ORTHO05D008552 2.7e-49 199.1 170 62.9
MD01G1213500 Malus domestica HOM05D006803 ORTHO05D008552 2.7e-49 199.1 172 59.3
Prupe.2G305500 Prunus persica HOM05D006803 ORTHO05D008552 2.7e-49 199.1 170 61.8
Carub.0008s1314 Capsella rubella HOM05D006803 ORTHO05D008552 4.6e-49 198.4 128 75.0
Duzib205G0804 Durio zibethinus HOM05D006803 ORTHO05D008552 4.6e-49 198.4 155 65.2
AT5G52960 Arabidopsis thaliana HOM05D006803 ORTHO05D008552 1.0e-48 197.2 122 77.9
Gohir.A08G097600 Gossypium hirsutum HOM05D006803 ORTHO05D008552 1.0e-48 197.2 154 65.6
Actinidia34181 Actinidia chinensis HOM05D006803 ORTHO05D008552 1.7e-48 196.4 176 60.2
FAN06G1048 Fragaria x ananassa HOM05D006803 ORTHO05D008552 1.7e-48 196.4 130 71.5
FAN06G4527 Fragaria x ananassa HOM05D006803 ORTHO05D008552 1.7e-48 196.4 130 71.5
FAN10G2870 Fragaria x ananassa HOM05D006803 ORTHO05D008552 2.3e-48 196.1 123 74.0
THA.LOC104825126 Tarenaya hassleriana HOM05D006803 ORTHO05D008552 2.3e-48 196.1 172 61.0
AL8G27460 Arabidopsis lyrata HOM05D006803 ORTHO05D008552 3.0e-48 195.7 122 77.9
FvH4_7g30800 Fragaria vesca HOM05D006803 ORTHO05D008552 3.0e-48 195.7 130 71.5
FAN03G2299 Fragaria x ananassa HOM05D006803 ORTHO05D008552 3.0e-48 195.7 123 73.2
MD07G1283300 Malus domestica HOM05D006803 ORTHO05D008552 3.0e-48 195.7 133 69.9
TWI39G0241 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 3.0e-48 195.7 139 69.8
Sp6g15120 Schrenkiella parvula HOM05D006803 ORTHO05D008552 3.9e-48 195.3 115 80.9
Migut.F00254 Erythranthe guttata HOM05D006803 ORTHO05D008552 5.0e-48 194.9 173 61.3
FAN01G0710 Fragaria x ananassa HOM05D006803 ORTHO05D008552 5.0e-48 194.9 130 71.5
Aqoxy7G00212 Aquilegia oxysepala HOM05D006803 ORTHO05D008552 6.6e-48 194.5 160 63.8
Eucgr.K00316 Eucalyptus grandis HOM05D006803 ORTHO05D008552 6.6e-48 194.5 131 71.0
Sabra15G0018100 Salix brachista HOM05D006803 ORTHO05D008552 6.6e-48 194.5 197 56.9
Sabra15G0020600 Salix brachista HOM05D006803 ORTHO05D008552 8.6e-48 194.1 197 56.3
Lj3C914T13 Lonicera japonica HOM05D006803 ORTHO05D008552 1.1e-47 193.7 172 61.6
Nn1g01776 Nelumbo nucifera HOM05D006803 ORTHO05D008552 1.1e-47 193.7 179 61.5
GSVIVG01028745001 Vitis vinifera HOM05D006803 ORTHO05D008552 1.9e-47 193.0 170 62.4
CiPaw.05G259100 Carya illinoinensis HOM05D006803 ORTHO05D008552 3.3e-47 192.2 175 58.3
TAR333G0006 Trochodendron aralioides HOM05D006803 ORTHO05D008552 3.3e-47 192.2 173 61.8
Potri.016G123100 Populus trichocarpa HOM05D006803 ORTHO05D008552 5.6e-47 191.4 154 63.0
SGA_v2.0_scaffold44G16771 Striga asiatica HOM05D006803 ORTHO05D008552 5.6e-47 191.4 170 61.8
MBI06_g04289_MAGBIO Magnolia biondii HOM05D006803 ORTHO05D008552 9.5e-47 190.7 156 62.2
CAN.G108.11 Capsicum annuum HOM05D006803 ORTHO05D008552 1.2e-46 190.3 174 59.2
CDE03G0029 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 2.8e-46 189.1 155 63.9
Sc19g0001080 Simmondsia chinensis HOM05D006803 ORTHO05D008552 6.2e-46 188.0 138 67.4
DCAR_014527 Daucus carota HOM05D006803 ORTHO05D008552 8.0e-46 187.6 170 57.6
Peaxi162Scf00904g00457 Petunia axillaris HOM05D006803 ORTHO05D008552 8.0e-46 187.6 179 54.7
EL10Ac3g05364 Beta vulgaris HOM05D006803 ORTHO05D008552 1.0e-45 187.2 157 61.1
CANSAT21G0672 Cannabis sativa HOM05D006803 ORTHO05D008552 1.8e-45 186.4 98 84.7
Sed0024434 Sechium edule HOM05D006803 ORTHO05D008552 1.8e-45 186.4 156 63.5
SalBow4G1856 Salvia bowleyana HOM05D006803 ORTHO05D008552 4.0e-45 185.3 172 59.9
SalBow4G1881 Salvia bowleyana HOM05D006803 ORTHO05D008552 4.0e-45 185.3 172 59.9
Lsat_1_v5_gn_9_57340 Lactuca sativa HOM05D006803 ORTHO05D008552 5.2e-45 184.9 170 58.8
Oeu044167.1 Olea europaea HOM05D006803 ORTHO05D008552 8.9e-45 184.1 170 61.8
Cc02_g02040 Coffea canephora HOM05D006803 ORTHO05D008552 1.2e-44 183.7 97 82.5
HanXRQChr09g0253111 Helianthus annuus HOM05D006803 ORTHO05D008552 1.2e-44 183.7 159 60.4
CDE04G2534 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 2.0e-44 183.0 158 62.0
Actinidia08612 Actinidia chinensis HOM05D006803 ORTHO05D008552 3.4e-44 182.2 178 57.3
PGR142G1334 Punica granatum HOM05D006803 ORTHO05D008552 3.4e-44 182.2 159 59.1
CSS0034587 Camellia sinensis var. sinensis HOM05D006803 ORTHO05D008552 4.4e-44 181.8 171 55.0
PSO384G2893 Papaver somniferum HOM05D006803 ORTHO05D008552 4.4e-44 181.8 139 64.7
Rhsim03G0197200 Rhododendron simsii HOM05D006803 ORTHO05D008552 7.5e-44 181.0 162 58.6
PSO135G0887 Papaver somniferum HOM05D006803 ORTHO05D008552 2.9e-43 179.1 158 60.1
ATR0721G182 Amborella trichopoda HOM05D006803 ORTHO05D008552 8.3e-43 177.6 133 63.2
ECA232G4170 Erigeron canadensis HOM05D006803 ORTHO05D008552 1.9e-42 176.4 100 80.0
Mapoly0006s0111 Marchantia polymorpha HOM05D006803 ORTHO05D008552 1.2e-41 173.7 97 74.2
Os05g0569200 Oryza sativa ssp. japonica HOM05D006803 ORTHO05D008552 1.2e-41 173.7 98 78.6
Zm00001eb296320 Zea mays HOM05D006803 ORTHO05D008552 2.0e-41 172.9 98 78.6
Sabra12G0022800 Salix brachista HOM05D006803 ORTHO05D008552 3.0e-40 169.1 246 43.9
SEGI_13941 Sequoiadendron giganteum HOM05D006803 ORTHO05D008552 1.6e-38 163.3 97 74.2
AagrBONN_evm.TU.Sc2ySwM_228.1351 Anthoceros agrestis HOM05D006803 ORTHO05D008552 1.4e-37 160.2 92 77.2
Pp3c4_26620 Physcomitrium patens HOM05D006803 ORTHO05D008552 2.3e-37 159.5 91 78.0
SMO169G0228 Selaginella moellendorffii HOM05D006803 ORTHO05D008552 4.0e-37 158.7 109 65.1
Nitab4.5_0001331g0090 Nicotiana tabacum HOM05D006803 ORTHO05D008552 2.4e-34 149.4 174 52.3
Nitab4.5_0000472g0050 Nicotiana tabacum HOM05D006803 ORTHO05D008552 4.1e-34 148.7 174 53.4
Pp3c26_8430 Physcomitrium patens HOM05D006803 ORTHO05D008552 4.1e-34 148.7 88 75.0
Haze_00093 Corylus avellana HOM05D006803 ORTHO05D008552 2.5e-31 139.4 142 57.7
BcaB08g35659 Brassica carinata HOM05D006803 ORTHO05D008552 4.3e-31 138.7 94 73.4
CARHR265930 Cardamine hirsuta HOM05D006803 ORTHO05D008552 5.6e-31 138.3 137 58.4
CBR_g9073 Chara braunii HOM05D006803 ORTHO05D008552 2.1e-30 136.3 98 62.2
Eucgr.L03342 Eucalyptus grandis HOM05D006803 ORTHO05D008552 6.4e-27 124.8 96 62.5
HPP92_011456 Vanilla planifolia HOM05D006803 ORTHO05D008552 1.9e-23 113.2 65 76.9
Oeu059677.1 Olea europaea HOM05D006803 ORTHO05D008552 4.7e-22 108.6 108 51.9
Oeu008094.1 Olea europaea HOM05D006803 ORTHO05D008552 3.8e-19 99.0 111 48.6
Oeu059693.1 Olea europaea HOM05D006803 ORTHO05D008552 3.5e-17 92.4 122 45.9
Thecc.03G190900 Theobroma cacao HOM05D006803 ORTHO05D008552 9.9e-12 74.3 36 91.7
RcHm_v2.0_Chr1g0379761 Rosa chinensis HOM05D006803 ORTHO05D008552 6.4e-11 71.6 35 91.4


User provided reference genes

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