Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.V5Y6WP Arachis hypogaea HOM05D000323 ORTHO05D000201 1.5e-26 122.1 60 100.0
arahy.Tifrunner.gnm1.ann1.69XFJ5 Arachis hypogaea HOM05D000323 ORTHO05D000201 2.1e-09 65.1 33 100.0
arahy.Tifrunner.gnm1.ann1.I0RZXY Arachis hypogaea HOM05D000323 ORTHO05D000201 2.1e-09 65.1 33 100.0
Glyma.01G022700 Glycine max HOM05D000323 ORTHO05D000201 1.1e-08 62.8 43 76.7
Glyma.09G199600 Glycine max HOM05D000323 ORTHO05D000201 1.1e-08 62.8 43 76.7
Ciclev10024972m.g Citrus clementina HOM05D000323 ORTHO05D000201 1.4e-08 62.4 33 93.9
QL06p035856 Quercus lobata HOM05D000323 ORTHO05D000201 1.8e-08 62.0 34 88.2
Ca_22701_v3 Cicer arietinum L. HOM05D000323 ORTHO05D000201 2.3e-08 61.6 33 90.9
Medtr5g032020 Medicago truncatula HOM05D000323 ORTHO05D000201 2.3e-08 61.6 33 90.9
CiPaw.08G140600 Carya illinoinensis HOM05D000323 ORTHO05D000201 3.1e-08 61.2 33 87.9
Phvul.003G288600 Phaseolus vulgaris HOM05D000323 ORTHO05D000201 3.1e-08 61.2 33 90.9
VMungo0251G1413 Vigna mungo HOM05D000323 ORTHO05D000201 3.1e-08 61.2 33 90.9
Cfa006875 Carpinus fangiana HOM05D000323 ORTHO05D000201 4.0e-08 60.8 33 87.9
Haze_03882 Corylus avellana HOM05D000323 ORTHO05D000201 4.0e-08 60.8 33 87.9
Glyma.18G147700 Glycine max HOM05D000323 ORTHO05D000201 4.0e-08 60.8 33 87.9
Lj2g0003522 Lotus japonicus HOM05D000323 ORTHO05D000201 4.0e-08 60.8 33 87.9
VMungo1215G0740 Vigna mungo HOM05D000323 ORTHO05D000201 4.0e-08 60.8 43 74.4
Phvul.002G146700 Phaseolus vulgaris HOM05D000323 ORTHO05D000201 5.2e-08 60.5 43 72.1
Psat2g085080 Pisum sativum HOM05D000323 ORTHO05D000201 5.2e-08 60.5 33 87.9
TPR.G8011 Trifolium pratense HOM05D000323 ORTHO05D000201 5.2e-08 60.5 33 87.9
Thecc.01G089700 Theobroma cacao HOM05D000323 ORTHO05D000201 6.8e-08 60.1 33 87.9
Dinv13594 Davidia involucrata HOM05D000323 ORTHO05D000201 8.9e-08 59.7 33 84.8
SGA_v2.0_scaffold45G17230 Striga asiatica HOM05D000323 ORTHO05D000201 8.9e-08 59.7 33 84.8
Actinidia06510 Actinidia chinensis HOM05D000323 ORTHO05D000201 1.2e-07 59.3 57 57.9
Migut.K00804 Erythranthe guttata HOM05D000323 ORTHO05D000201 1.2e-07 59.3 33 81.8
Lalb_Chr05g0216401 Lupinus albus HOM05D000323 ORTHO05D000201 1.2e-07 59.3 33 87.9
FAN28G0048 Fragaria x ananassa HOM05D000323 ORTHO05D000201 2.0e-07 58.5 33 84.8
Atru.chr3.1236 Acer truncatum HOM05D000323 ORTHO05D000201 2.6e-07 58.2 33 84.8
arahy.Tifrunner.gnm1.ann1.PF7EUS Arachis hypogaea HOM05D000323 ORTHO05D000201 2.6e-07 58.2 33 84.8
arahy.Tifrunner.gnm1.ann1.X506T0 Arachis hypogaea HOM05D000323 ORTHO05D000201 2.6e-07 58.2 33 84.8
CiPaw.07G047000 Carya illinoinensis HOM05D000323 ORTHO05D000201 2.6e-07 58.2 33 78.8
Duzib187G1499 Durio zibethinus HOM05D000323 ORTHO05D000201 2.6e-07 58.2 33 84.8
COL.COLO4_27360 Corchorus olitorius HOM05D000323 ORTHO05D000201 3.4e-07 57.8 32 84.4
FAN23G2966 Fragaria x ananassa HOM05D000323 ORTHO05D000201 4.4e-07 57.4 33 81.8
FAN26G2837 Fragaria x ananassa HOM05D000323 ORTHO05D000201 4.4e-07 57.4 33 81.8
Potri.007G011400 Populus trichocarpa HOM05D000323 ORTHO05D000201 4.4e-07 57.4 32 81.2
CSS0013386 Camellia sinensis var. sinensis HOM05D000323 ORTHO05D000201 5.8e-07 57.0 33 78.8
CSS0016909 Camellia sinensis var. sinensis HOM05D000323 ORTHO05D000201 5.8e-07 57.0 33 78.8
Cpa.g.sc55.17 Carica papaya HOM05D000323 ORTHO05D000201 5.8e-07 57.0 32 84.4
Ca_22616_v3 Cicer arietinum L. HOM05D000323 ORTHO05D000201 5.8e-07 57.0 33 84.8
Lj2A533G47 Lonicera japonica HOM05D000323 ORTHO05D000201 5.8e-07 57.0 33 78.8
Sabra07G0008900 Salix brachista HOM05D000323 ORTHO05D000201 5.8e-07 57.0 32 78.1
A01p01040 Brassica napus HOM05D000323 ORTHO05D000201 7.6e-07 56.6 33 78.8
BraA01t00102Z Brassica rapa HOM05D000323 ORTHO05D000201 7.6e-07 56.6 33 78.8
CANSAT01G0748 Cannabis sativa HOM05D000323 ORTHO05D000201 7.6e-07 56.6 33 78.8
CAN.G1344.20 Capsicum annuum HOM05D000323 ORTHO05D000201 7.6e-07 56.6 32 81.2
ECA238G3568 Erigeron canadensis HOM05D000323 ORTHO05D000201 7.6e-07 56.6 32 81.2
MBI16_g27572_MAGBIO Magnolia biondii HOM05D000323 ORTHO05D000201 7.6e-07 56.6 32 81.2
SalBow5G2501 Salvia bowleyana HOM05D000323 ORTHO05D000201 7.6e-07 56.6 33 75.8
SalBow5G2828 Salvia bowleyana HOM05D000323 ORTHO05D000201 7.6e-07 56.6 33 75.8
DCAR_014181 Daucus carota HOM05D000323 ORTHO05D000201 9.9e-07 56.2 33 81.8
FvH4_1g19590 Fragaria vesca HOM05D000323 ORTHO05D000201 9.9e-07 56.2 33 78.8
FAN19G0719 Fragaria x ananassa HOM05D000323 ORTHO05D000201 9.9e-07 56.2 33 78.8
Nn1g05586 Nelumbo nucifera HOM05D000323 ORTHO05D000201 9.9e-07 56.2 33 81.8
Oeu031123.1 Olea europaea HOM05D000323 ORTHO05D000201 9.9e-07 56.2 33 75.8
PGR102G3063 Punica granatum HOM05D000323 ORTHO05D000201 9.9e-07 56.2 32 84.4
TPR.G29842 Trifolium pratense HOM05D000323 ORTHO05D000201 9.9e-07 56.2 33 84.8
Cc07_g14030 Coffea canephora HOM05D000323 ORTHO05D000201 1.3e-06 55.8 32 78.1
Gohir.D11G053700 Gossypium hirsutum HOM05D000323 ORTHO05D000201 1.3e-06 55.8 33 78.8
Gorai.007G058700 Gossypium raimondii HOM05D000323 ORTHO05D000201 1.3e-06 55.8 33 78.8
MD15G1311400 Malus domestica HOM05D000323 ORTHO05D000201 1.3e-06 55.8 33 78.8
Nitab4.5_0003930g0050 Nicotiana tabacum HOM05D000323 ORTHO05D000201 1.3e-06 55.8 32 81.2
Peaxi162Scf00474g00730 Petunia axillaris HOM05D000323 ORTHO05D000201 1.3e-06 55.8 32 81.2
RcHm_v2.0_Chr2g0111121 Rosa chinensis HOM05D000323 ORTHO05D000201 1.3e-06 55.8 33 78.8
TAR376G1014 Trochodendron aralioides HOM05D000323 ORTHO05D000201 1.3e-06 55.8 33 78.8
MSTRG.15684 Avicennia marina HOM05D000323 ORTHO05D000201 1.7e-06 55.5 33 72.7
EL10Ac6g15198 Beta vulgaris HOM05D000323 ORTHO05D000201 1.7e-06 55.5 33 75.8
BcaNung00946 Brassica carinata HOM05D000323 ORTHO05D000201 1.7e-06 55.5 33 75.8
BcaNung00949 Brassica carinata HOM05D000323 ORTHO05D000201 1.7e-06 55.5 33 75.8
BcaNung05374 Brassica carinata HOM05D000323 ORTHO05D000201 1.7e-06 55.5 33 75.8
C01p01160 Brassica napus HOM05D000323 ORTHO05D000201 1.7e-06 55.5 33 75.8
BolC1t00114H Brassica oleracea HOM05D000323 ORTHO05D000201 1.7e-06 55.5 33 75.8
Carub.0007s0217 Capsella rubella HOM05D000323 ORTHO05D000201 1.7e-06 55.5 33 75.8
HanXRQChr07g0188781 Helianthus annuus HOM05D000323 ORTHO05D000201 1.7e-06 55.5 32 84.4
Nitab4.5_0006221g0030 Nicotiana tabacum HOM05D000323 ORTHO05D000201 1.7e-06 55.5 32 78.1
Hund14187 Selenicereus undatus HOM05D000323 ORTHO05D000201 1.7e-06 55.5 33 75.8
Solyc11g010690.3 Solanum lycopersicum HOM05D000323 ORTHO05D000201 1.7e-06 55.5 32 78.1
Sopen11g005490 Solanum pennellii HOM05D000323 ORTHO05D000201 1.7e-06 55.5 32 78.1
PGSC0003DMG400016198 Solanum tuberosum HOM05D000323 ORTHO05D000201 1.7e-06 55.5 32 78.1
vmacro13010 Vaccinium macrocarpon HOM05D000323 ORTHO05D000201 1.7e-06 55.5 32 81.2
Aqoxy5G01376 Aquilegia oxysepala HOM05D000323 ORTHO05D000201 2.2e-06 55.1 33 75.8
Eucgr.H04721 Eucalyptus grandis HOM05D000323 ORTHO05D000201 2.2e-06 55.1 33 78.8
AL7G12590 Arabidopsis lyrata HOM05D000323 ORTHO05D000201 2.9e-06 54.7 33 72.7
AT4G38050 Arabidopsis thaliana HOM05D000323 ORTHO05D000201 2.9e-06 54.7 33 75.8
AUR62003669 Chenopodium quinoa HOM05D000323 ORTHO05D000201 2.9e-06 54.7 32 75.0
Gohir.A11G050401 Gossypium hirsutum HOM05D000323 ORTHO05D000201 2.9e-06 54.7 33 78.8
Medtr8g068550 Medicago truncatula HOM05D000323 ORTHO05D000201 2.9e-06 54.7 33 81.8
Rhsim10G0173300 Rhododendron simsii HOM05D000323 ORTHO05D000201 2.9e-06 54.7 32 78.1
TAR628G1616 Trochodendron aralioides HOM05D000323 ORTHO05D000201 2.9e-06 54.7 32 78.1
HPP92_014908 Vanilla planifolia HOM05D000323 ORTHO05D000201 2.9e-06 54.7 57 50.9
Thhalv10024538m.g Eutrema salsugineum HOM05D000323 ORTHO05D000201 3.7e-06 54.3 33 72.7
THA.LOC104824914 Tarenaya hassleriana HOM05D000323 ORTHO05D000201 3.7e-06 54.3 33 78.8
Manes.13G100700 Manihot esculenta HOM05D000323 ORTHO05D000201 4.9e-06 53.9 32 78.1
AUR62017978 Chenopodium quinoa HOM05D000323 ORTHO05D000201 8.4e-06 53.1 32 71.9
Sed0008457 Sechium edule HOM05D000323 ORTHO05D000201 8.4e-06 53.1 32 71.9


User provided reference genes

Program Settings