Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.V5BWPF Arachis hypogaea HOM05D006101 ORTHO05D007422 1.8e-232 808.9 408 100.0
arahy.Tifrunner.gnm1.ann1.P58SHS Arachis hypogaea HOM05D006101 ORTHO05D007422 1.4e-208 729.6 384 96.4
arahy.Tifrunner.gnm1.ann1.66BK9V Arachis hypogaea HOM05D006101 ORTHO05D007422 1.3e-179 633.3 373 87.1
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 4.0e-136 488.8 461 56.8
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 9.0e-136 487.6 461 57.3
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 2.1e-132 476.5 461 57.9
VMungo1127G1509 Vigna mungo HOM05D006101 ORTHO05D007422 2.3e-131 473.0 462 55.8
Lj3g0002990 Lotus japonicus HOM05D006101 ORTHO05D007422 1.6e-129 466.8 471 54.8
Ca_30122_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 1.1e-128 464.2 459 56.6
Ca_02469_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 6.1e-124 448.4 459 55.3
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 8.8e-123 444.5 459 54.5
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 1.4e-120 437.2 460 54.6
arahy.Tifrunner.gnm1.ann1.KM9ELV Arachis hypogaea HOM05D006101 ORTHO05D007422 2.9e-118 429.5 214 98.1
Manes.04G013700 Manihot esculenta HOM05D006101 ORTHO05D007422 2.0e-95 353.6 464 43.1
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 1.0e-94 351.3 463 44.3
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 1.7e-94 350.5 463 43.4
VMungo1215G2511 Vigna mungo HOM05D006101 ORTHO05D007422 5.5e-93 345.5 284 60.6
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 4.7e-92 342.4 462 42.4
Duzib150G0708 Durio zibethinus HOM05D006101 ORTHO05D007422 8.0e-92 341.7 463 42.8
Potri.009G006200 Populus trichocarpa HOM05D006101 ORTHO05D007422 1.4e-91 340.9 459 43.6
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 6.8e-91 338.6 472 40.5
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 8.8e-91 338.2 459 43.6
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 2.6e-90 336.7 456 43.0
TWI75G1238 Tripterygium wilfordii HOM05D006101 ORTHO05D007422 3.4e-90 336.3 460 43.0
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 4.4e-90 335.9 462 43.7
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 1.1e-88 331.3 464 41.4
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 1.4e-88 330.9 461 44.9
Thecc.09G350300 Theobroma cacao HOM05D006101 ORTHO05D007422 1.4e-88 330.9 463 41.5
Dinv16214 Davidia involucrata HOM05D006101 ORTHO05D007422 9.1e-88 328.2 463 42.5
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 4.5e-87 325.9 462 40.7
CsaV3_1G013150 Cucumis sativus L. HOM05D006101 ORTHO05D007422 7.7e-87 325.1 464 40.3
Gohir.D03G139000 Gossypium hirsutum HOM05D006101 ORTHO05D007422 7.7e-87 325.1 462 40.7
COL.COLO4_11107 Corchorus olitorius HOM05D006101 ORTHO05D007422 6.6e-86 322.0 463 40.4
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 4.2e-85 319.3 466 39.3
Gorai.003G145800 Gossypium raimondii HOM05D006101 ORTHO05D007422 5.5e-85 318.9 462 40.5
MD11G1147300 Malus domestica HOM05D006101 ORTHO05D007422 1.6e-84 317.4 456 39.9
ClCG03G002470 Citrullus lanatus HOM05D006101 ORTHO05D007422 3.6e-84 316.2 464 39.4
FvH4_3g30770 Fragaria vesca HOM05D006101 ORTHO05D007422 6.8e-83 312.0 460 41.3
Sed0008610 Sechium edule HOM05D006101 ORTHO05D007422 1.7e-81 307.4 457 39.2
THA.LOC104800579 Tarenaya hassleriana HOM05D006101 ORTHO05D007422 2.0e-79 300.4 464 38.4
CAN.G546.34 Capsicum annuum HOM05D006101 ORTHO05D007422 4.5e-79 299.3 464 36.4
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 1.7e-78 297.4 465 40.2
MELO3C004994.2 Cucumis melo HOM05D006101 ORTHO05D007422 5.0e-78 295.8 524 36.1
HanXRQChr13g0396251 Helianthus annuus HOM05D006101 ORTHO05D007422 5.0e-78 295.8 462 38.3
FAN16G0923 Fragaria x ananassa HOM05D006101 ORTHO05D007422 2.5e-77 293.5 461 39.7
FAN25G1259 Fragaria x ananassa HOM05D006101 ORTHO05D007422 5.6e-77 292.4 465 39.1
PSO063G0796 Papaver somniferum HOM05D006101 ORTHO05D007422 7.3e-77 292.0 468 38.9
Sopen11g026080 Solanum pennellii HOM05D006101 ORTHO05D007422 7.3e-77 292.0 465 36.3
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 1.6e-76 290.8 385 45.7
FAN21G1086 Fragaria x ananassa HOM05D006101 ORTHO05D007422 2.8e-76 290.0 461 40.3
PSO339G3309 Papaver somniferum HOM05D006101 ORTHO05D007422 3.6e-76 289.7 468 39.1
Solyc11g066340.2 Solanum lycopersicum HOM05D006101 ORTHO05D007422 6.1e-76 288.9 465 35.7
AL4G22020 Arabidopsis lyrata HOM05D006101 ORTHO05D007422 8.0e-76 288.5 448 35.7
Lsat_1_v5_gn_6_44300 Lactuca sativa HOM05D006101 ORTHO05D007422 1.4e-75 287.7 462 36.1
Ciclev10028403m.g Citrus clementina HOM05D006101 ORTHO05D007422 3.1e-75 286.6 462 37.7
Hma1.2p1_0051F.1_g029390 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 5.2e-75 285.8 442 38.5
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.2e-74 284.6 400 39.0
arahy.Tifrunner.gnm1.ann1.PH2QKZ Arachis hypogaea HOM05D006101 ORTHO05D007422 2.6e-74 283.5 258 65.9
Nitab4.5_0000329g0130 Nicotiana tabacum HOM05D006101 ORTHO05D007422 4.4e-74 282.7 475 36.4
Actinidia03696 Actinidia chinensis HOM05D006101 ORTHO05D007422 5.8e-74 282.3 469 38.4
ECA233G2185 Erigeron canadensis HOM05D006101 ORTHO05D007422 1.7e-73 280.8 434 37.8
Sp4g10940 Schrenkiella parvula HOM05D006101 ORTHO05D007422 1.7e-73 280.8 462 35.9
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 4.9e-73 279.3 495 35.6
Carub.0004s0893 Capsella rubella HOM05D006101 ORTHO05D007422 6.4e-73 278.9 461 35.4
Aqoxy1G01111 Aquilegia oxysepala HOM05D006101 ORTHO05D007422 8.3e-73 278.5 472 38.1
AT2G28130 Arabidopsis thaliana HOM05D006101 ORTHO05D007422 1.1e-72 278.1 465 35.3
MSTRG.21091 Avicennia marina HOM05D006101 ORTHO05D007422 1.1e-72 278.1 461 36.4
Sabra09G0003500 Salix brachista HOM05D006101 ORTHO05D007422 3.2e-72 276.6 365 41.6
CANSAT56G2622 Cannabis sativa HOM05D006101 ORTHO05D007422 5.4e-72 275.8 450 37.1
PGSC0003DMG400000413 Solanum tuberosum HOM05D006101 ORTHO05D007422 9.2e-72 275.0 464 35.3
BcaB02g10150 Brassica carinata HOM05D006101 ORTHO05D007422 1.7e-70 270.8 461 34.9
Eucgr.B03934 Eucalyptus grandis HOM05D006101 ORTHO05D007422 6.6e-70 268.9 456 37.1
BcaC02g10947 Brassica carinata HOM05D006101 ORTHO05D007422 8.6e-70 268.5 465 35.3
Rhsim01G0211100 Rhododendron simsii HOM05D006101 ORTHO05D007422 8.6e-70 268.5 468 37.4
PGR102G2892 Punica granatum HOM05D006101 ORTHO05D007422 4.3e-69 266.2 458 36.0
Migut.D02287 Erythranthe guttata HOM05D006101 ORTHO05D007422 1.2e-68 264.6 465 35.1
Peaxi162Scf00086g01114 Petunia axillaris HOM05D006101 ORTHO05D007422 1.6e-68 264.2 465 35.5
Aa31LG5G8010 Aethionema arabicum HOM05D006101 ORTHO05D007422 2.1e-68 263.8 463 34.8
Sc06g0010850 Simmondsia chinensis HOM05D006101 ORTHO05D007422 2.8e-68 263.5 468 35.7
A07p18660 Brassica napus HOM05D006101 ORTHO05D007422 1.4e-67 261.2 465 34.4
Cc01_g10370 Coffea canephora HOM05D006101 ORTHO05D007422 1.4e-67 261.2 468 35.0
BraA07t29579Z Brassica rapa HOM05D006101 ORTHO05D007422 4.0e-67 259.6 461 34.1
BolC4t23840H Brassica oleracea HOM05D006101 ORTHO05D007422 5.2e-67 259.2 465 35.3
C04p23380 Brassica napus HOM05D006101 ORTHO05D007422 1.2e-66 258.1 465 34.6
CARHR120970 Cardamine hirsuta HOM05D006101 ORTHO05D007422 3.7e-65 253.1 465 34.0
Thhalv10016576m.g Eutrema salsugineum HOM05D006101 ORTHO05D007422 1.2e-63 248.1 496 32.5
Nn2g13844 Nelumbo nucifera HOM05D006101 ORTHO05D007422 4.6e-63 246.1 418 36.1
EL10Ac9g22610 Beta vulgaris HOM05D006101 ORTHO05D007422 6.0e-63 245.7 471 32.9
Oeu007313.2 Olea europaea HOM05D006101 ORTHO05D007422 7.8e-63 245.4 501 33.5
Ah.01g014140 Amaranthus hybridus HOM05D006101 ORTHO05D007422 1.7e-62 244.2 461 34.7
CDE09G0605 Ceratophyllum demersum HOM05D006101 ORTHO05D007422 3.0e-62 243.4 466 32.8
SGA_v2.0_scaffold27G11561 Striga asiatica HOM05D006101 ORTHO05D007422 6.6e-62 242.3 478 33.3
ATR0088G017 Amborella trichopoda HOM05D006101 ORTHO05D007422 8.6e-62 241.9 445 32.8
SalBow4G3219 Salvia bowleyana HOM05D006101 ORTHO05D007422 1.2e-60 238.0 465 34.4
MBI13_g39328_MAGBIO Magnolia biondii HOM05D006101 ORTHO05D007422 5.2e-59 232.6 550 30.0
arahy.Tifrunner.gnm1.ann1.EU9JMW Arachis hypogaea HOM05D006101 ORTHO05D007422 3.2e-56 223.4 192 69.3
vmacro14396 Vaccinium macrocarpon HOM05D006101 ORTHO05D007422 1.3e-54 218.0 440 33.0
Dinv29372 Davidia involucrata HOM05D006101 ORTHO05D007422 5.6e-53 212.6 257 45.9
Nitab4.5_0003880g0040 Nicotiana tabacum HOM05D006101 ORTHO05D007422 6.2e-52 209.1 482 30.5
AUR62014957 Chenopodium quinoa HOM05D006101 ORTHO05D007422 8.1e-52 208.8 300 37.0
Os01g0241100 Oryza sativa ssp. japonica HOM05D006101 ORTHO05D007422 4.4e-50 203.0 464 31.9
AUR62029180 Chenopodium quinoa HOM05D006101 ORTHO05D007422 5.8e-50 202.6 460 29.8
HPP92_020176 Vanilla planifolia HOM05D006101 ORTHO05D007422 1.0e-46 191.8 466 30.7
DCAR_018770 Daucus carota HOM05D006101 ORTHO05D007422 1.4e-43 181.4 380 32.4
arahy.Tifrunner.gnm1.ann1.88XJ4T Arachis hypogaea HOM05D006101 ORTHO05D007422 3.4e-42 176.8 107 82.2
unitig_747.g21973 Utricularia gibba HOM05D006101 ORTHO05D007422 2.3e-38 164.1 355 31.0
HanXRQChr04g0111151 Helianthus annuus HOM05D006101 ORTHO05D007422 2.1e-36 157.5 182 42.3
Hund08365 Selenicereus undatus HOM05D006101 ORTHO05D007422 7.6e-34 149.1 467 27.8
Zm00001eb118850 Zea mays HOM05D006101 ORTHO05D007422 4.0e-27 126.7 331 28.4
Hma1.2p1_0051F.1_g029400 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 3.4e-26 123.6 117 52.1
TPR.G36765 Trifolium pratense HOM05D006101 ORTHO05D007422 5.8e-26 122.9 76 75.0
SEGI_30921 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 8.2e-20 102.4 184 32.1
arahy.Tifrunner.gnm1.ann1.Y0M1V0 Arachis hypogaea HOM05D006101 ORTHO05D007422 7.6e-18 95.9 78 80.8
arahy.Tifrunner.gnm1.ann1.AAV4SA Arachis hypogaea HOM05D006101 ORTHO05D007422 1.3e-17 95.1 101 53.5
SHI06230 Sapria himalayana HOM05D006101 ORTHO05D007422 1.2e-15 88.6 154 36.4
SEGI_35146 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 1.0e-14 85.5 118 38.1
Pp3c4_7040 Physcomitrium patens HOM05D006101 ORTHO05D007422 1.4e-11 75.1 452 22.6
Glyma.09G075800 Glycine max HOM05D006101 ORTHO05D007422 5.5e-08 63.2 52 59.6
arahy.Tifrunner.gnm1.ann1.KT1YEE Arachis hypogaea HOM05D032090 ORTHO05D007422 1.4e-06 58.5 29 93.1
SHI06228 Sapria himalayana HOM05D006101 ORTHO05D007422 3.0e-06 57.4 196 23.5


User provided reference genes

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