Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.V58P3M Arachis hypogaea HOM05D003793 ORTHO05D004471 4.3e-92 341.3 168 100.0
arahy.Tifrunner.gnm1.ann1.TXPN3Z Arachis hypogaea HOM05D003793 ORTHO05D004471 4.5e-33 145.2 69 98.6
arahy.Tifrunner.gnm1.ann1.5NG4EY Arachis hypogaea HOM05D003793 ORTHO05D004471 1.7e-32 143.3 69 97.1
arahy.Tifrunner.gnm1.ann1.L925XS Arachis hypogaea HOM05D003793 ORTHO05D004471 1.7e-32 143.3 69 97.1
arahy.Tifrunner.gnm1.ann1.SYC9J3 Arachis hypogaea HOM05D003793 ORTHO05D004471 1.7e-32 143.3 69 97.1
TAR375G0772 Trochodendron aralioides HOM05D003793 ORTHO05D004471 4.2e-31 138.7 69 92.8
Glyma.12G014300 Glycine max HOM05D003793 ORTHO05D004471 7.2e-31 137.9 69 92.8
CiPaw.05G212400 Carya illinoinensis HOM05D003793 ORTHO05D004471 2.1e-30 136.3 69 91.3
Dinv29122 Davidia involucrata HOM05D003793 ORTHO05D004471 2.1e-30 136.3 69 91.3
TPR.G38857 Trifolium pratense HOM05D003793 ORTHO05D004471 3.6e-30 135.6 69 89.9
GSVIVG01024322001 Vitis vinifera HOM05D003793 ORTHO05D004471 3.6e-30 135.6 69 89.9
Gorai.003G058100 Gossypium raimondii HOM05D003793 ORTHO05D004471 4.7e-30 135.2 76 82.9
VMungo1127G2010 Vigna mungo HOM05D003793 ORTHO05D004471 4.7e-30 135.2 69 89.9
Nn1g09155 Nelumbo nucifera HOM05D003793 ORTHO05D004471 6.1e-30 134.8 69 89.9
vmacro09916 Vaccinium macrocarpon HOM05D003793 ORTHO05D004471 6.1e-30 134.8 69 89.9
Ca_13083_v3 Cicer arietinum L. HOM05D003793 ORTHO05D004471 8.0e-30 134.4 69 89.9
ClCG02G007700 Citrullus lanatus HOM05D003793 ORTHO05D004471 1.8e-29 133.3 69 87.0
FAN14G1236 Fragaria x ananassa HOM05D003793 ORTHO05D004471 1.8e-29 133.3 77 83.1
PSO210G3154 Papaver somniferum HOM05D003793 ORTHO05D004471 1.8e-29 133.3 69 88.4
Cpa.g.sc43.146 Carica papaya HOM05D003793 ORTHO05D004471 2.3e-29 132.9 69 87.0
Lalb_Chr05g0211181 Lupinus albus HOM05D003793 ORTHO05D004471 2.3e-29 132.9 68 91.2
PSO210G3487 Papaver somniferum HOM05D003793 ORTHO05D004471 2.3e-29 132.9 69 88.4
Gohir.A02G114300 Gossypium hirsutum HOM05D003793 ORTHO05D004471 3.0e-29 132.5 69 88.4
Oeu027984.2 Olea europaea HOM05D003793 ORTHO05D004471 3.0e-29 132.5 69 87.0
Cfa016078 Carpinus fangiana HOM05D003793 ORTHO05D004471 4.0e-29 132.1 68 88.2
Haze_00367 Corylus avellana HOM05D003793 ORTHO05D004471 4.0e-29 132.1 68 88.2
Duzib106G1724 Durio zibethinus HOM05D003793 ORTHO05D004471 4.0e-29 132.1 69 88.4
Duzib177G0459 Durio zibethinus HOM05D003793 ORTHO05D004471 4.0e-29 132.1 70 85.7
Lj3A883G46 Lonicera japonica HOM05D003793 ORTHO05D004471 4.0e-29 132.1 68 89.7
Lj3g0009427 Lotus japonicus HOM05D003793 ORTHO05D004471 4.0e-29 132.1 69 88.4
VMungo1127G0200 Vigna mungo HOM05D003793 ORTHO05D004471 4.0e-29 132.1 69 87.0
HanXRQChr08g0217461 Helianthus annuus HOM05D003793 ORTHO05D004471 5.2e-29 131.7 69 87.0
HanXRQChr08g0217471 Helianthus annuus HOM05D003793 ORTHO05D004471 5.2e-29 131.7 69 87.0
HanXRQChr08g0217581 Helianthus annuus HOM05D003793 ORTHO05D004471 5.2e-29 131.7 69 87.0
Lsat_1_v5_gn_2_104420 Lactuca sativa HOM05D003793 ORTHO05D004471 5.2e-29 131.7 69 87.0
Actinidia33800 Actinidia chinensis HOM05D003793 ORTHO05D004471 6.8e-29 131.3 69 88.4
CAN.G726.8 Capsicum annuum HOM05D003793 ORTHO05D004471 6.8e-29 131.3 69 87.0
FvH4_6g17810 Fragaria vesca HOM05D003793 ORTHO05D004471 6.8e-29 131.3 68 88.2
FAN02G3282 Fragaria x ananassa HOM05D003793 ORTHO05D004471 6.8e-29 131.3 68 88.2
FAN05G0338 Fragaria x ananassa HOM05D003793 ORTHO05D004471 6.8e-29 131.3 68 88.2
FAN05G4652 Fragaria x ananassa HOM05D003793 ORTHO05D004471 6.8e-29 131.3 68 88.2
Glyma.12G014200 Glycine max HOM05D003793 ORTHO05D004471 6.8e-29 131.3 69 87.0
Lsat_1_v5_gn_8_24121 Lactuca sativa HOM05D003793 ORTHO05D004471 6.8e-29 131.3 69 88.4
Os02g0701600 Oryza sativa ssp. japonica HOM05D003793 ORTHO05D004471 6.8e-29 131.3 69 87.0
Phvul.011G017200 Phaseolus vulgaris HOM05D003793 ORTHO05D004471 6.8e-29 131.3 69 85.5
QL09p020586 Quercus lobata HOM05D003793 ORTHO05D004471 6.8e-29 131.3 68 88.2
EL10Ac3g05040 Beta vulgaris HOM05D003793 ORTHO05D004471 8.8e-29 131.0 67 89.6
Migut.J00551 Erythranthe guttata HOM05D003793 ORTHO05D004471 8.8e-29 131.0 70 84.3
Eucgr.K00068 Eucalyptus grandis HOM05D003793 ORTHO05D004471 8.8e-29 131.0 69 87.0
Glyma.09G222800 Glycine max HOM05D003793 ORTHO05D004471 8.8e-29 131.0 69 87.0
Nitab4.5_0000411g0010 Nicotiana tabacum HOM05D003793 ORTHO05D004471 8.8e-29 131.0 69 87.0
Phvul.011G017100 Phaseolus vulgaris HOM05D003793 ORTHO05D004471 8.8e-29 131.0 69 85.5
SalBow3G1300 Salvia bowleyana HOM05D003793 ORTHO05D004471 8.8e-29 131.0 69 85.5
SalBow3G2252 Salvia bowleyana HOM05D003793 ORTHO05D004471 8.8e-29 131.0 69 85.5
TWI60G0578 Tripterygium wilfordii HOM05D003793 ORTHO05D004471 8.8e-29 131.0 70 84.3
Zm00001eb251860 Zea mays HOM05D003793 ORTHO05D004471 8.8e-29 131.0 69 87.0
Aqoxy6G01753 Aquilegia oxysepala HOM05D003793 ORTHO05D004471 1.2e-28 130.6 70 84.3
Gohir.D03G055300 Gossypium hirsutum HOM05D003793 ORTHO05D004471 1.2e-28 130.6 69 87.0
Potri.013G077000 Populus trichocarpa HOM05D003793 ORTHO05D004471 1.2e-28 130.6 69 87.0
Rhsim09G0190300 Rhododendron simsii HOM05D003793 ORTHO05D004471 1.2e-28 130.6 69 87.0
Sabra13G0066000 Salix brachista HOM05D003793 ORTHO05D004471 1.2e-28 130.6 69 87.0
vmacro22191 Vaccinium macrocarpon HOM05D003793 ORTHO05D004471 1.2e-28 130.6 69 87.0
Atru.chr12.1860 Acer truncatum HOM05D003793 ORTHO05D004471 1.5e-28 130.2 68 88.2
MELO3C024736.2 Cucumis melo HOM05D003793 ORTHO05D004471 1.5e-28 130.2 69 85.5
Hma1.2p1_0419F.1_g149530 Hydrangea macrophylla HOM05D003793 ORTHO05D004471 1.5e-28 130.2 71 83.1
MD12G1017400 Malus domestica HOM05D003793 ORTHO05D004471 1.5e-28 130.2 68 86.8
Prupe.7G118300 Prunus persica HOM05D003793 ORTHO05D004471 1.5e-28 130.2 68 86.8
AUR62028213 Chenopodium quinoa HOM05D003793 ORTHO05D004471 2.0e-28 129.8 68 86.8
HanXRQChr11g0342111 Helianthus annuus HOM05D003793 ORTHO05D004471 2.0e-28 129.8 69 87.0
MD14G1015100 Malus domestica HOM05D003793 ORTHO05D004471 2.0e-28 129.8 68 86.8
QL09p020551 Quercus lobata HOM05D003793 ORTHO05D004471 2.0e-28 129.8 68 86.8
Hund26874 Selenicereus undatus HOM05D003793 ORTHO05D004471 2.0e-28 129.8 67 88.1
unitig_578.g15801 Utricularia gibba HOM05D003793 ORTHO05D004471 2.0e-28 129.8 69 87.0
Aqoxy6G01754 Aquilegia oxysepala HOM05D003793 ORTHO05D004471 2.6e-28 129.4 70 82.9
Medtr1g014690 Medicago truncatula HOM05D003793 ORTHO05D004471 2.6e-28 129.4 68 88.2
Nitab4.5_0004045g0040 Nicotiana tabacum HOM05D003793 ORTHO05D004471 2.6e-28 129.4 68 86.8
Sed0025175 Sechium edule HOM05D003793 ORTHO05D004471 2.6e-28 129.4 69 84.1
Solyc08g076360.4 Solanum lycopersicum HOM05D003793 ORTHO05D004471 2.6e-28 129.4 69 85.5
Actinidia34215 Actinidia chinensis HOM05D003793 ORTHO05D004471 3.4e-28 129.0 69 84.1
COL.COLO4_15127 Corchorus olitorius HOM05D003793 ORTHO05D004471 3.4e-28 129.0 68 86.8
Thecc.05G223100 Theobroma cacao HOM05D003793 ORTHO05D004471 3.4e-28 129.0 69 87.0
HPP92_022760 Vanilla planifolia HOM05D003793 ORTHO05D004471 3.4e-28 129.0 69 87.0
MSTRG.5738 Avicennia marina HOM05D003793 ORTHO05D004471 4.4e-28 128.6 69 84.1
Ciclev10005360m.g Citrus clementina HOM05D003793 ORTHO05D004471 4.4e-28 128.6 69 85.5
Ciclev10032026m.g Citrus clementina HOM05D003793 ORTHO05D004471 4.4e-28 128.6 69 85.5
Psat6g024400 Pisum sativum HOM05D003793 ORTHO05D004471 5.7e-28 128.3 69 84.1
ECA233G1952 Erigeron canadensis HOM05D003793 ORTHO05D004471 7.5e-28 127.9 69 85.5
Aa31LG2G2160 Aethionema arabicum HOM05D003793 ORTHO05D004471 9.8e-28 127.5 69 84.1
ATR0829G208 Amborella trichopoda HOM05D003793 ORTHO05D004471 9.8e-28 127.5 68 85.3
CsaV3_2G036010 Cucumis sativus L. HOM05D003793 ORTHO05D004471 9.8e-28 127.5 69 82.6
Manes.08G160400 Manihot esculenta HOM05D003793 ORTHO05D004471 9.8e-28 127.5 68 86.8
Rhsim09G0214000 Rhododendron simsii HOM05D003793 ORTHO05D004471 1.3e-27 127.1 68 85.3
Sc13g0011010 Simmondsia chinensis HOM05D003793 ORTHO05D004471 1.3e-27 127.1 69 79.7
Ah.04g156140 Amaranthus hybridus HOM05D003793 ORTHO05D004471 1.7e-27 126.7 69 82.6
RcHm_v2.0_Chr3g0472061 Rosa chinensis HOM05D003793 ORTHO05D004471 1.7e-27 126.7 68 85.3
HPP92_027662 Vanilla planifolia HOM05D003793 ORTHO05D004471 1.7e-27 126.7 68 85.3
HPP92_027670 Vanilla planifolia HOM05D003793 ORTHO05D004471 1.7e-27 126.7 68 86.8
Aa31LG2G2170 Aethionema arabicum HOM05D003793 ORTHO05D004471 2.8e-27 125.9 69 82.6
A02p12940 Brassica napus HOM05D003793 ORTHO05D004471 4.8e-27 125.2 69 82.6
BraA02t06348Z Brassica rapa HOM05D003793 ORTHO05D004471 4.8e-27 125.2 69 82.6
SEGI_24486 Sequoiadendron giganteum HOM05D003793 ORTHO05D004471 4.8e-27 125.2 90 70.0
Duzib177G0347 Durio zibethinus HOM05D003793 ORTHO05D004471 6.3e-27 124.8 69 85.5
Gohir.A13G157500 Gossypium hirsutum HOM05D003793 ORTHO05D004471 6.3e-27 124.8 69 81.2
Gohir.D13G162300 Gossypium hirsutum HOM05D003793 ORTHO05D004471 6.3e-27 124.8 69 81.2
Gorai.013G184400 Gossypium raimondii HOM05D003793 ORTHO05D004471 6.3e-27 124.8 69 81.2
Hund00468 Selenicereus undatus HOM05D003793 ORTHO05D004471 6.3e-27 124.8 69 82.6
THA.LOC104805718 Tarenaya hassleriana HOM05D003793 ORTHO05D004471 6.3e-27 124.8 69 82.6
CANSAT21G0915 Cannabis sativa HOM05D003793 ORTHO05D004471 8.3e-27 124.4 68 83.8
Atru.chr12.1866 Acer truncatum HOM05D003793 ORTHO05D004471 1.1e-26 124.0 68 85.3
Thhalv10018768m.g Eutrema salsugineum HOM05D003793 ORTHO05D004471 1.1e-26 124.0 69 81.2
AT1G64970 Arabidopsis thaliana HOM05D003793 ORTHO05D004471 1.4e-26 123.6 68 82.4
Carub.0002s1011 Capsella rubella HOM05D003793 ORTHO05D004471 1.4e-26 123.6 69 81.2
Cc11_g00040 Coffea canephora HOM05D003793 ORTHO05D004471 1.4e-26 123.6 69 81.2
Pp3c11_23800 Physcomitrium patens HOM05D003793 ORTHO05D004471 1.4e-26 123.6 69 81.2
BcaC03g16025 Brassica carinata HOM05D003793 ORTHO05D004471 1.8e-26 123.2 69 82.6
C02p37750 Brassica napus HOM05D003793 ORTHO05D004471 1.8e-26 123.2 69 82.6
BolC2t09793H Brassica oleracea HOM05D003793 ORTHO05D004471 1.8e-26 123.2 69 82.6
BraA02t07388Z Brassica rapa HOM05D003793 ORTHO05D004471 1.8e-26 123.2 69 82.6
CDE11G0124 Ceratophyllum demersum HOM05D003793 ORTHO05D004471 1.8e-26 123.2 68 83.8
BcaC03g14668 Brassica carinata HOM05D003793 ORTHO05D004471 3.1e-26 122.5 74 77.0
ATR0829G050 Amborella trichopoda HOM05D003793 ORTHO05D004471 4.1e-26 122.1 68 76.5
AL2G19520 Arabidopsis lyrata HOM05D003793 ORTHO05D004471 4.1e-26 122.1 69 79.7
BcaB05g24071 Brassica carinata HOM05D003793 ORTHO05D004471 4.1e-26 122.1 69 81.2
C02p21050 Brassica napus HOM05D003793 ORTHO05D004471 4.1e-26 122.1 69 81.2
BolC2t08246H Brassica oleracea HOM05D003793 ORTHO05D004471 4.1e-26 122.1 69 81.2
Sp5g19260 Schrenkiella parvula HOM05D003793 ORTHO05D004471 4.1e-26 122.1 69 79.7
THA.LOC104821707 Tarenaya hassleriana HOM05D003793 ORTHO05D004471 5.4e-26 121.7 69 79.7
Mapoly0025s0046 Marchantia polymorpha HOM05D003793 ORTHO05D004471 7.0e-26 121.3 69 81.2
Hund00469 Selenicereus undatus HOM05D003793 ORTHO05D004471 7.0e-26 121.3 68 82.4
CDE12G0793 Ceratophyllum demersum HOM05D003793 ORTHO05D004471 9.1e-26 120.9 69 81.2
PGR142G3821 Punica granatum HOM05D003793 ORTHO05D004471 9.1e-26 120.9 68 83.8
A02p23940 Brassica napus HOM05D003793 ORTHO05D004471 1.6e-25 120.2 69 81.2
AagrBONN_evm.TU.Sc2ySwM_362.1718 Anthoceros agrestis HOM05D003793 ORTHO05D004471 2.7e-25 119.4 67 82.1
arahy.Tifrunner.gnm1.ann1.2TKZ7Y Arachis hypogaea HOM05D000590 ORTHO05D001713 2.7e-25 119.4 62 90.3
CARHR056370 Cardamine hirsuta HOM05D003793 ORTHO05D004471 2.7e-25 119.4 69 78.3
SMO145G0054 Selaginella moellendorffii HOM05D003793 ORTHO05D004471 2.7e-25 119.4 68 76.5
Mapoly0921s0001 Marchantia polymorpha HOM05D003793 ORTHO05D004471 4.5e-25 118.6 69 79.7
CDE11G0369 Ceratophyllum demersum HOM05D003793 ORTHO05D004471 1.7e-24 116.7 69 78.3
PGR142G3948 Punica granatum HOM05D003793 ORTHO05D004471 1.7e-24 116.7 68 77.9
PGR142G4176 Punica granatum HOM05D003793 ORTHO05D004471 1.7e-24 116.7 68 77.9
Peaxi162Scf00052g00016 Petunia axillaris HOM05D003793 ORTHO05D004471 5.0e-24 115.2 69 75.4
CDE02G3720 Ceratophyllum demersum HOM05D003793 ORTHO05D004471 2.5e-23 112.8 69 75.4
Nitab4.5_0001475g0030 Nicotiana tabacum HOM05D003793 ORTHO05D004471 3.2e-23 112.5 61 82.0
CDE01G0103 Ceratophyllum demersum HOM05D003793 ORTHO05D004471 4.2e-23 112.1 63 81.0
Nn3g21149 Nelumbo nucifera HOM05D003793 ORTHO05D004471 4.2e-23 112.1 69 73.9
SGA_v2.0_scaffold126G33927 Striga asiatica HOM05D003793 ORTHO05D004471 4.2e-23 112.1 60 83.3
Cre09.g393400 Chlamydomonas reinhardtii HOM05D003793 ORTHO05D004471 7.2e-23 111.3 68 73.5
MCO16G568 Micromonas commoda HOM05D003793 ORTHO05D004471 4.7e-22 108.6 66 74.2
Cc06_g18700 Coffea canephora HOM05D003793 ORTHO05D004471 6.1e-22 108.2 69 68.1
arahy.Tifrunner.gnm1.ann1.4UW4R2 Arachis hypogaea HOM05D001821 ORTHO05D001778 4.0e-21 105.5 62 80.6
arahy.Tifrunner.gnm1.ann1.QG2AY3 Arachis hypogaea HOM05D001821 ORTHO05D001778 4.0e-21 105.5 62 80.6
Cc06_g18710 Coffea canephora HOM05D003793 ORTHO05D004471 1.2e-20 104.0 69 68.1
Cc06_g18750 Coffea canephora HOM05D003793 ORTHO05D004471 1.7e-19 100.1 69 63.8
SMO115G0333 Selaginella moellendorffii HOM05D003793 ORTHO05D004471 3.7e-19 99.0 68 61.8
SMO119G0172 Selaginella moellendorffii HOM05D003793 ORTHO05D004471 3.7e-19 99.0 68 61.8
SMO351G0374 Selaginella moellendorffii HOM05D003793 ORTHO05D004471 8.3e-19 97.8 68 60.3
PGR142G2095 Punica granatum HOM05D003793 ORTHO05D004471 1.8e-18 96.7 68 66.2
Oeu001351.2 Olea europaea HOM05D003793 ORTHO05D004471 7.7e-17 91.3 46 87.0
arahy.Tifrunner.gnm1.ann1.DIJP1R Arachis hypogaea HOM05D003793 ORTHO05D004471 1.0e-16 90.9 181 38.7
SMO119G0398 Selaginella moellendorffii HOM05D003793 ORTHO05D004471 1.9e-15 86.7 68 52.9
FAN09G3950 Fragaria x ananassa HOM05D003793 ORTHO05D004471 5.6e-15 85.1 53 71.7
MCO13G309 Micromonas commoda HOM05D003793 ORTHO05D004471 7.3e-15 84.7 64 56.2
Cre14.g624350 Chlamydomonas reinhardtii HOM05D003793 ORTHO05D004471 2.1e-14 83.2 60 56.7
PRCOL_00002005 Prasinoderma coloniale HOM05D003793 ORTHO05D004471 1.8e-13 80.1 62 50.0
Mapoly0008s0048 Marchantia polymorpha HOM05D003793 ORTHO05D004471 2.3e-13 79.7 46 78.3
MCO15G681 Micromonas commoda HOM05D003793 ORTHO05D004471 6.8e-13 78.2 63 50.8
Mapoly0013s0102 Marchantia polymorpha HOM05D003793 ORTHO05D004471 1.2e-12 77.4 46 73.9
ECA238G4812 Erigeron canadensis HOM05D003793 ORTHO05D004471 2.0e-12 76.6 69 56.5
AUR62002095 Chenopodium quinoa HOM05D003793 ORTHO05D004471 1.6e-09 67.0 35 82.9
Medtr4g036005 Medicago truncatula HOM05D003793 ORTHO05D004471 7.8e-09 64.7 48 64.6
LjContig00408g0002790 Lotus japonicus HOM05D003793 ORTHO05D004471 2.1e-06 56.6 49 53.1
Rhsim03G0258600 Rhododendron simsii HOM05D001535 ORTHO05D004010 6.2e-06 55.1 88 34.1
arahy.Tifrunner.gnm1.ann1.FM31KL Arachis hypogaea HOM05D000423 ORTHO05D001713 8.0e-06 54.7 36 66.7


User provided reference genes

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