Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.V4TPJI Arachis hypogaea HOM05D006074 ORTHO05D008728 7.1e-226 786.9 402 100.0
arahy.Tifrunner.gnm1.ann1.1Y4ZQN Arachis hypogaea HOM05D006074 ORTHO05D008728 1.4e-221 772.7 404 98.5
Lj2g0007765 Lotus japonicus HOM05D006074 ORTHO05D008728 3.0e-168 595.5 367 82.0
Lalb_Chr21g0318901 Lupinus albus HOM05D006074 ORTHO05D008728 1.1e-165 587.0 402 75.4
Medtr1g039990 Medicago truncatula HOM05D006074 ORTHO05D008728 5.0e-163 578.2 373 79.1
Psat1g075640 Pisum sativum HOM05D006074 ORTHO05D008728 1.9e-162 576.2 354 83.1
Phvul.004G027100 Phaseolus vulgaris HOM05D006074 ORTHO05D008728 1.8e-160 569.7 388 76.3
VMungo0464G0585 Vigna mungo HOM05D006074 ORTHO05D008728 1.0e-155 553.9 339 82.3
Sabra17G0072000 Salix brachista HOM05D006074 ORTHO05D008728 2.1e-153 546.2 396 69.7
CiPaw.03G029000 Carya illinoinensis HOM05D006074 ORTHO05D008728 6.8e-152 541.2 383 70.2
QL02p081203 Quercus lobata HOM05D006074 ORTHO05D008728 9.8e-151 537.3 359 75.5
TAR622G0709 Trochodendron aralioides HOM05D006074 ORTHO05D008728 1.3e-150 537.0 359 73.8
TAR729G0002 Trochodendron aralioides HOM05D006074 ORTHO05D008728 1.3e-150 537.0 359 73.8
Potri.017G080300 Populus trichocarpa HOM05D006074 ORTHO05D008728 3.7e-150 535.4 357 74.8
Actinidia02708 Actinidia chinensis HOM05D006074 ORTHO05D008728 3.1e-149 532.3 363 73.8
CSS0024892 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 5.4e-149 531.6 372 72.6
GSVIVG01011374001 Vitis vinifera HOM05D006074 ORTHO05D008728 1.6e-148 530.0 382 69.4
Hma1.2p1_0449F.1_g155300 Hydrangea macrophylla HOM05D006074 ORTHO05D008728 4.5e-148 528.5 369 73.4
TPR.G10370 Trifolium pratense HOM05D006074 ORTHO05D008728 1.3e-147 526.9 310 85.5
Glyma.19G020800 Glycine max HOM05D006074 ORTHO05D008728 5.0e-147 525.0 367 74.1
CSS0026498 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.9e-146 523.1 372 72.6
vmacro18203 Vaccinium macrocarpon HOM05D006074 ORTHO05D008728 1.2e-145 520.4 367 70.8
Duzib187G1598 Durio zibethinus HOM05D006074 ORTHO05D008728 2.1e-145 519.6 369 71.5
FAN02G2663 Fragaria x ananassa HOM05D006074 ORTHO05D008728 3.6e-145 518.8 410 66.6
Prupe.3G270100 Prunus persica HOM05D006074 ORTHO05D008728 4.7e-145 518.5 417 65.5
MD09G1048800 Malus domestica HOM05D006074 ORTHO05D008728 1.4e-144 516.9 413 65.1
RcHm_v2.0_Chr2g0168871 Rosa chinensis HOM05D006074 ORTHO05D008728 1.4e-144 516.9 372 71.2
FvH4_6g49080 Fragaria vesca HOM05D006074 ORTHO05D008728 5.7e-143 511.5 371 70.9
Rhsim08G0067900 Rhododendron simsii HOM05D006074 ORTHO05D008728 2.2e-142 509.6 369 69.9
BcaC06g30896 Brassica carinata HOM05D006074 ORTHO05D008728 1.4e-141 506.9 365 69.3
Thecc.04G099800 Theobroma cacao HOM05D006074 ORTHO05D008728 7.0e-141 504.6 367 68.7
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 2.0e-140 503.1 377 67.4
BraA06t26953Z Brassica rapa HOM05D006074 ORTHO05D008728 2.0e-140 503.1 377 67.4
CsaV3_3G041590 Cucumis sativus L. HOM05D006074 ORTHO05D008728 3.5e-140 502.3 364 69.2
ClCG10G014940 Citrullus lanatus HOM05D006074 ORTHO05D008728 7.8e-140 501.1 368 68.5
COL.COLO4_36112 Corchorus olitorius HOM05D006074 ORTHO05D008728 7.8e-140 501.1 346 72.8
Lsat_1_v5_gn_4_177200 Lactuca sativa HOM05D006074 ORTHO05D008728 7.8e-140 501.1 368 67.7
Ca_04272_v3 Cicer arietinum L. HOM05D006074 ORTHO05D008728 1.3e-139 500.4 311 83.3
MBI02_g10680_MAGBIO Magnolia biondii HOM05D006074 ORTHO05D008728 1.3e-139 500.4 375 65.3
Aa31LG2G4460 Aethionema arabicum HOM05D006074 ORTHO05D008728 3.0e-139 499.2 357 68.6
MELO3C009883.2 Cucumis melo HOM05D006074 ORTHO05D008728 3.0e-139 499.2 356 70.2
BcaC06g33639 Brassica carinata HOM05D006074 ORTHO05D008728 5.0e-139 498.4 377 66.6
Gohir.A07G215200 Gossypium hirsutum HOM05D006074 ORTHO05D008728 8.6e-139 497.7 402 65.2
Sp2g17410 Schrenkiella parvula HOM05D006074 ORTHO05D008728 8.6e-139 497.7 369 68.3
BolC7t44287H Brassica oleracea HOM05D006074 ORTHO05D008728 1.1e-138 497.3 377 66.3
Carub.0005s0731 Capsella rubella HOM05D006074 ORTHO05D008728 1.1e-138 497.3 366 68.9
Cpa.g.sc14.19 Carica papaya HOM05D006074 ORTHO05D008728 1.5e-138 496.9 415 63.4
PSO591G0110 Papaver somniferum HOM05D006074 ORTHO05D008728 1.5e-138 496.9 369 67.5
Sopen03g012680 Solanum pennellii HOM05D006074 ORTHO05D008728 1.5e-138 496.9 362 68.2
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 1.9e-138 496.5 377 66.6
PSO832G2479 Papaver somniferum HOM05D006074 ORTHO05D008728 1.9e-138 496.5 374 67.6
Eucgr.J01218 Eucalyptus grandis HOM05D006074 ORTHO05D008728 2.5e-138 496.1 368 69.0
Aqoxy3G03321 Aquilegia oxysepala HOM05D006074 ORTHO05D008728 5.6e-138 495.0 370 66.8
PGSC0003DMG400009217 Solanum tuberosum HOM05D006074 ORTHO05D008728 5.6e-138 495.0 369 67.2
Migut.H00904 Erythranthe guttata HOM05D006074 ORTHO05D008728 7.3e-138 494.6 352 68.5
CAN.G579.8 Capsicum annuum HOM05D006074 ORTHO05D008728 1.2e-137 493.8 377 64.2
AT3G28760 Arabidopsis thaliana HOM05D006074 ORTHO05D008728 1.6e-137 493.4 365 68.2
Solyc03g058860.3 Solanum lycopersicum HOM05D006074 ORTHO05D008728 1.6e-137 493.4 369 67.2
HanXRQChr09g0265461 Helianthus annuus HOM05D006074 ORTHO05D008728 4.7e-137 491.9 359 68.0
PGR083G0972 Punica granatum HOM05D006074 ORTHO05D008728 6.2e-137 491.5 371 69.3
CANSAT64G1183 Cannabis sativa HOM05D006074 ORTHO05D008728 1.4e-136 490.3 390 66.7
Oeu060929.1 Olea europaea HOM05D006074 ORTHO05D008728 5.2e-136 488.4 359 68.2
Lju41C23G10 Lonicera japonica HOM05D006074 ORTHO05D008728 8.9e-136 487.6 388 66.0
ATR0564G024 Amborella trichopoda HOM05D006074 ORTHO05D008728 1.2e-135 487.3 384 65.1
CSS0026374 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 2.0e-135 486.5 363 69.7
CANSAT64G2140 Cannabis sativa HOM05D006074 ORTHO05D008728 2.0e-135 486.5 390 66.4
Gorai.001G256400 Gossypium raimondii HOM05D006074 ORTHO05D008728 4.4e-135 485.3 436 60.3
AL5G18490 Arabidopsis lyrata HOM05D006074 ORTHO05D008728 5.8e-135 485.0 369 66.9
THA.LOC104823933 Tarenaya hassleriana HOM05D006074 ORTHO05D008728 7.5e-135 484.6 391 63.7
Gohir.D07G222100 Gossypium hirsutum HOM05D006074 ORTHO05D008728 2.2e-134 483.0 402 63.7
Atru.BG.207.p Acer truncatum HOM05D006074 ORTHO05D008728 5.4e-133 478.4 351 69.8
DCAR_021653 Daucus carota HOM05D006074 ORTHO05D008728 1.3e-131 473.8 355 67.6
CSS0037615 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.7e-131 473.4 360 68.1
AUR62038861 Chenopodium quinoa HOM05D006074 ORTHO05D008728 1.7e-131 473.4 401 61.3
Cc07_g03180 Coffea canephora HOM05D006074 ORTHO05D008728 2.3e-131 473.0 368 65.2
TWI34G1337 Tripterygium wilfordii HOM05D006074 ORTHO05D008728 2.3e-131 473.0 376 65.7
EL10Ac2g02949 Beta vulgaris HOM05D006074 ORTHO05D008728 5.0e-131 471.9 376 63.6
AUR62031615 Chenopodium quinoa HOM05D006074 ORTHO05D008728 1.9e-130 469.9 401 61.3
SalBow1G4287 Salvia bowleyana HOM05D006074 ORTHO05D008728 4.3e-130 468.8 359 65.5
Sc14g0005980 Simmondsia chinensis HOM05D006074 ORTHO05D008728 7.3e-130 468.0 360 65.6
Sed0009974 Sechium edule HOM05D006074 ORTHO05D008728 9.5e-130 467.6 346 66.5
Dinv33738 Davidia involucrata HOM05D006074 ORTHO05D008728 1.1e-128 464.2 369 64.0
ECA232G4667 Erigeron canadensis HOM05D006074 ORTHO05D008728 1.1e-128 464.2 345 66.4
Nn4g23084 Nelumbo nucifera HOM05D006074 ORTHO05D008728 2.0e-127 459.9 329 70.2
Os03g0170300 Oryza sativa ssp. japonica HOM05D006074 ORTHO05D008728 5.8e-127 458.4 365 64.4
Hund15626 Selenicereus undatus HOM05D006074 ORTHO05D008728 1.1e-125 454.1 358 65.1
Peaxi162Scf00451g00822 Petunia axillaris HOM05D006074 ORTHO05D008728 1.1e-122 444.1 300 73.7
Zm00001eb402270 Zea mays HOM05D006074 ORTHO05D008728 1.9e-122 443.4 352 63.9
SGA_v2.0_scaffold59G20672 Striga asiatica HOM05D006074 ORTHO05D008728 9.5e-122 441.0 322 67.7
Nitab4.5_0003081g0050 Nicotiana tabacum HOM05D006074 ORTHO05D008728 2.8e-121 439.5 331 66.2
Nitab4.5_0000002g0350 Nicotiana tabacum HOM05D006074 ORTHO05D008728 4.7e-121 438.7 316 69.0
Thhalv10004593m.g Eutrema salsugineum HOM05D006074 ORTHO05D008728 1.8e-120 436.8 317 69.4
Manes.15G177000 Manihot esculenta HOM05D006074 ORTHO05D008728 6.6e-115 418.3 273 74.7
AagrBONN_evm.TU.Sc2ySwM_228.462 Anthoceros agrestis HOM05D006074 ORTHO05D008728 3.6e-105 386.0 353 55.2
Pp3c9_19570 Physcomitrium patens HOM05D006074 ORTHO05D008728 3.1e-104 382.9 380 53.2
Pp3c10_1080 Physcomitrium patens HOM05D006074 ORTHO05D008728 1.5e-98 364.0 357 52.1
Mapoly0005s0075 Marchantia polymorpha HOM05D006074 ORTHO05D008728 3.4e-95 352.8 389 48.1
Glyma.13G064100 Glycine max HOM05D006074 ORTHO05D008728 1.3e-94 350.9 255 73.3
FAN14G0759 Fragaria x ananassa HOM05D006074 ORTHO05D008728 1.1e-82 311.2 436 46.8
CDE02G2631 Ceratophyllum demersum HOM05D006074 ORTHO05D008728 5.7e-82 308.9 257 60.3
Pp3c15_19890 Physcomitrium patens HOM05D006074 ORTHO05D008728 1.6e-81 307.4 342 48.2
Ciclev10012867m.g Citrus clementina HOM05D006074 ORTHO05D008728 1.4e-80 304.3 184 82.6
unitig_21.g20922 Utricularia gibba HOM05D006074 ORTHO05D008728 5.3e-80 302.4 276 54.7
Lsat_1_v5_gn_4_177220 Lactuca sativa HOM05D006074 ORTHO05D008728 8.5e-70 268.5 184 72.3
MCO08G127 Micromonas commoda HOM05D006074 ORTHO05D008728 5.1e-67 259.2 368 42.7
SEGI_14685 Sequoiadendron giganteum HOM05D006074 ORTHO05D008728 5.1e-67 259.2 183 65.0
Pp3c1_20750 Physcomitrium patens HOM05D006074 ORTHO05D020966 2.4e-64 250.4 411 36.3
Pp3c1_20753 Physcomitrium patens HOM05D006074 ORTHO05D020966 2.4e-64 250.4 411 36.3
CARHR151760 Cardamine hirsuta HOM05D006074 ORTHO05D008728 2.2e-62 243.8 225 58.2
Pp3c2_18540 Physcomitrium patens HOM05D006074 ORTHO05D020966 4.7e-60 236.1 463 33.5
Cre05.g248250 Chlamydomonas reinhardtii HOM05D006074 ORTHO05D008728 9.1e-56 221.9 340 40.9
Pp3c10_2120 Physcomitrium patens HOM05D006074 ORTHO05D020966 1.5e-53 214.5 518 28.4
PRCOL_00003957 Prasinoderma coloniale HOM05D006074 ORTHO05D008728 3.0e-51 206.8 356 37.6
Haze_18216 Corylus avellana HOM05D000132 ORTHO05D000058 7.2e-37 159.1 170 51.8
Lsat_1_v5_gn_0_26800 Lactuca sativa HOM05D006074 ORTHO05D008728 6.8e-35 152.5 153 49.0
Lsat_1_v5_gn_3_53141 Lactuca sativa HOM05D006074 ORTHO05D008728 2.9e-30 137.1 143 47.6
Sabra17G0081400 Salix brachista HOM05D006074 ORTHO05D008728 2.1e-20 104.4 71 74.6
Atru.chr3.96 Acer truncatum HOM05D006074 ORTHO05D026256 5.2e-19 99.8 68 75.0
Pp3c20_4730 Physcomitrium patens HOM05D006074 ORTHO05D026055 4.9e-17 93.2 167 37.1
Pp3c8_20190 Physcomitrium patens HOM05D006074 ORTHO05D026055 6.4e-17 92.8 170 33.5
Pp3c23_20410 Physcomitrium patens HOM05D006074 ORTHO05D026055 1.4e-16 91.7 179 35.2
CDE02G1972 Ceratophyllum demersum HOM05D006074 ORTHO05D026256 3.2e-16 90.5 63 68.3
Actinidia17537 Actinidia chinensis HOM05D006074 ORTHO05D026256 7.0e-16 89.4 66 68.2
PGSC0003DMG400013970 Solanum tuberosum HOM05D006074 ORTHO05D008728 6.0e-15 86.3 58 69.0
Pp3c20_10280 Physcomitrium patens HOM05D006074 ORTHO05D026055 3.0e-14 84.0 184 30.4
HanXRQChr09g0253281 Helianthus annuus HOM05D006074 ORTHO05D008728 3.1e-11 73.9 53 73.6
SEGI_18941 Sequoiadendron giganteum HOM05D006074 ORTHO05D026256 3.9e-06 57.0 50 60.0


User provided reference genes

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