Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.V3MY1S Arachis hypogaea HOM05D003715 ORTHO05D003958 1.7e-131 472.6 237 100.0
arahy.Tifrunner.gnm1.ann1.85Z4HY Arachis hypogaea HOM05D003715 ORTHO05D003958 4.2e-93 345.1 242 77.3
Glyma.16G153700 Glycine max HOM05D003715 ORTHO05D003958 1.5e-58 230.3 293 49.5
VMungo0464G1653 Vigna mungo HOM05D003715 ORTHO05D003958 1.5e-58 230.3 287 48.1
Glyma.02G072500 Glycine max HOM05D003715 ORTHO05D003958 5.7e-58 228.4 281 50.9
Phvul.004G080700 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 5.4e-56 221.9 286 49.7
Cfa001533 Carpinus fangiana HOM05D003715 ORTHO05D003958 2.7e-55 219.5 298 44.6
Ca_04486_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 2.1e-52 209.9 253 51.4
QL07p018445 Quercus lobata HOM05D003715 ORTHO05D003958 2.1e-52 209.9 304 44.1
TPR.G9142 Trifolium pratense HOM05D003715 ORTHO05D003958 3.0e-51 206.1 249 49.0
Medtr6g029250 Medicago truncatula HOM05D003715 ORTHO05D003958 4.0e-51 205.7 249 49.8
Lalb_Chr02g0157161 Lupinus albus HOM05D003715 ORTHO05D003958 6.8e-51 204.9 286 46.5
Haze_19430 Corylus avellana HOM05D003715 ORTHO05D003958 4.4e-50 202.2 306 42.5
Ca_08274_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 6.3e-49 198.4 264 47.7
Manes.09G140500 Manihot esculenta HOM05D003715 ORTHO05D003958 8.6e-46 188.0 287 41.8
Lalb_Chr14g0364551 Lupinus albus HOM05D003715 ORTHO05D003958 9.5e-45 184.5 264 45.5
Actinidia22080 Actinidia chinensis HOM05D003715 ORTHO05D003958 2.1e-44 183.3 306 41.5
CiPaw.10G001300 Carya illinoinensis HOM05D003715 ORTHO05D003958 4.7e-44 182.2 308 40.3
Manes.08G145000 Manihot esculenta HOM05D003715 ORTHO05D003958 4.0e-43 179.1 290 40.7
Lalb_Chr22g0359081 Lupinus albus HOM05D003715 ORTHO05D003958 6.8e-43 178.3 303 42.2
Psat1g091040 Pisum sativum HOM05D003715 ORTHO05D003958 6.8e-43 178.3 261 43.7
TPR.G5870 Trifolium pratense HOM05D003715 ORTHO05D003958 1.5e-42 177.2 272 43.4
Dinv14575 Davidia involucrata HOM05D003715 ORTHO05D003958 1.7e-41 173.7 291 40.2
Psat3g088760 Pisum sativum HOM05D003715 ORTHO05D003958 2.2e-41 173.3 269 43.5
Atru.chr2.1400 Acer truncatum HOM05D003715 ORTHO05D003958 1.1e-40 171.0 297 38.4
Hma1.2p1_0152F.1_g067600 Hydrangea macrophylla HOM05D003715 ORTHO05D003958 7.0e-40 168.3 285 39.3
Medtr7g085790 Medicago truncatula HOM05D003715 ORTHO05D003958 9.2e-40 167.9 278 42.4
TWI34G1349 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 1.2e-39 167.5 301 36.9
Phvul.001G111500 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 2.0e-39 166.8 287 42.5
Sabra19G0044200 Salix brachista HOM05D003715 ORTHO05D003958 2.7e-39 166.4 306 37.6
Sabra19G0047500 Salix brachista HOM05D003715 ORTHO05D003958 2.7e-39 166.4 306 37.6
PGSC0003DMG400008354 Solanum tuberosum HOM05D003715 ORTHO05D003958 1.0e-38 164.5 258 42.6
Ciclev10021362m.g Citrus clementina HOM05D003715 ORTHO05D003958 1.3e-38 164.1 297 39.7
Lj1g0012553 Lotus japonicus HOM05D003715 ORTHO05D003958 1.3e-38 164.1 303 39.6
Potri.019G035600 Populus trichocarpa HOM05D003715 ORTHO05D003958 2.3e-38 163.3 307 37.1
TAR623G0055 Trochodendron aralioides HOM05D003715 ORTHO05D003958 2.3e-38 163.3 303 37.0
Potri.013G057200 Populus trichocarpa HOM05D003715 ORTHO05D003958 3.9e-38 162.5 306 37.6
Eucgr.A02102 Eucalyptus grandis HOM05D003715 ORTHO05D003958 8.6e-38 161.4 295 35.9
Oeu035703.1 Olea europaea HOM05D003715 ORTHO05D003958 8.6e-38 161.4 288 36.8
Nitab4.5_0002769g0040 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.5e-37 160.6 273 38.8
PGR142G1981 Punica granatum HOM05D003715 ORTHO05D003958 1.9e-37 160.2 292 40.1
Solyc10g078590.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 2.5e-37 159.8 260 42.7
Lj1g0002462 Lotus japonicus HOM05D003715 ORTHO05D003958 4.3e-37 159.1 279 40.1
Sopen10g029220 Solanum pennellii HOM05D003715 ORTHO05D003958 9.5e-37 157.9 260 42.3
Dinv37021 Davidia involucrata HOM05D003715 ORTHO05D003958 2.1e-36 156.8 286 38.5
Peaxi162Scf00463g00019 Petunia axillaris HOM05D003715 ORTHO05D003958 3.6e-36 156.0 293 35.8
Sabra13G0051000 Salix brachista HOM05D003715 ORTHO05D003958 3.6e-36 156.0 306 37.3
TWI32G0411 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 3.6e-36 156.0 301 38.2
Glyma.19G112800 Glycine max HOM05D003715 ORTHO05D003958 6.2e-36 155.2 298 37.9
VMungo1383G2890 Vigna mungo HOM05D003715 ORTHO05D003958 6.2e-36 155.2 283 41.0
PGR042G0616 Punica granatum HOM05D003715 ORTHO05D003958 8.0e-36 154.8 278 41.0
Duzib106G1922 Durio zibethinus HOM05D003715 ORTHO05D003958 1.1e-35 154.5 305 37.7
Oeu024502.1 Olea europaea HOM05D003715 ORTHO05D003958 1.1e-35 154.5 285 36.8
MSTRG.26069 Avicennia marina HOM05D003715 ORTHO05D003958 2.3e-35 153.3 279 37.6
Thecc.05G249800 Theobroma cacao HOM05D003715 ORTHO05D003958 4.0e-35 152.5 294 36.4
Nitab4.5_0000658g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.5e-34 150.6 298 36.2
vmacro12564 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 2.0e-34 150.2 290 39.0
Glyma.16G040300 Glycine max HOM05D003715 ORTHO05D003958 1.3e-33 147.5 295 37.3
Prupe.7G006100 Prunus persica HOM05D003715 ORTHO05D003958 2.9e-33 146.4 315 36.8
Actinidia30549 Actinidia chinensis HOM05D003715 ORTHO05D003958 4.9e-33 145.6 129 60.5
Cpa.g.sc51.130 Carica papaya HOM05D003715 ORTHO05D003958 1.1e-32 144.4 297 37.4
MD14G1003600 Malus domestica HOM05D003715 ORTHO05D003958 1.1e-32 144.4 299 35.8
Gohir.A11G235300 Gossypium hirsutum HOM05D003715 ORTHO05D003958 1.4e-32 144.1 312 35.3
Peaxi162Scf00003g04827 Petunia axillaris HOM05D003715 ORTHO05D003958 1.4e-32 144.1 254 37.0
Gorai.007G262000 Gossypium raimondii HOM05D003715 ORTHO05D003958 5.4e-32 142.1 299 35.5
Nitab4.5_0000358g0150 Nicotiana tabacum HOM05D003715 ORTHO05D003958 7.1e-32 141.7 272 39.3
PSO384G3755 Papaver somniferum HOM05D003715 ORTHO05D003958 1.6e-31 140.6 287 33.8
Aqoxy2G00514 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 6.0e-31 138.7 278 36.0
Sc13g0002630 Simmondsia chinensis HOM05D003715 ORTHO05D003958 7.8e-31 138.3 294 33.0
Nn2g12054 Nelumbo nucifera HOM05D003715 ORTHO05D003958 1.0e-30 137.9 270 34.1
COL.COLO4_36085 Corchorus olitorius HOM05D003715 ORTHO05D003958 1.3e-30 137.5 286 35.7
MBI01_g25640_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 2.3e-30 136.7 315 30.8
MD12G1005100 Malus domestica HOM05D003715 ORTHO05D003958 2.3e-30 136.7 293 37.9
PSO339G5928 Papaver somniferum HOM05D003715 ORTHO05D003958 3.0e-30 136.3 290 32.1
DCAR_019875 Daucus carota HOM05D003715 ORTHO05D003958 5.1e-30 135.6 275 33.5
MBI04_g28023_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 5.1e-30 135.6 291 36.4
Gohir.D11G246200 Gossypium hirsutum HOM05D003715 ORTHO05D003958 6.6e-30 135.2 299 35.1
CANSAT78G1806 Cannabis sativa HOM05D003715 ORTHO05D003958 8.6e-30 134.8 311 34.1
Eucgr.K01502 Eucalyptus grandis HOM05D003715 ORTHO05D003958 9.5e-29 131.3 275 36.4
Hund19231 Selenicereus undatus HOM05D003715 ORTHO05D003958 1.2e-28 131.0 282 33.3
PSO781G0019 Papaver somniferum HOM05D003715 ORTHO05D003958 2.1e-28 130.2 263 32.7
SGA_v2.0_scaffold94G28404 Striga asiatica HOM05D003715 ORTHO05D003958 2.8e-28 129.8 258 38.4
arahy.Tifrunner.gnm1.ann1.KTU7AY Arachis hypogaea HOM05D003715 ORTHO05D003958 4.7e-28 129.0 250 40.0
RcHm_v2.0_Chr3g0497011 Rosa chinensis HOM05D003715 ORTHO05D003958 1.4e-27 127.5 311 34.7
TAR369G0375 Trochodendron aralioides HOM05D003715 ORTHO05D003958 2.3e-27 126.7 254 33.5
FvH4_1g28230 Fragaria vesca HOM05D003715 ORTHO05D003958 3.1e-27 126.3 288 34.7
TAR633G2492 Trochodendron aralioides HOM05D003715 ORTHO05D003958 3.1e-27 126.3 297 29.6
BcaB01g06399 Brassica carinata HOM05D003715 ORTHO05D003958 1.5e-26 124.0 262 35.5
FAN23G0877 Fragaria x ananassa HOM05D003715 ORTHO05D003958 1.5e-26 124.0 288 34.7
ECA238G2879 Erigeron canadensis HOM05D003715 ORTHO05D003958 3.4e-26 122.9 277 33.6
FAN26G1768 Fragaria x ananassa HOM05D003715 ORTHO05D003958 3.4e-26 122.9 288 36.1
MELO3C008806.2 Cucumis melo HOM05D003715 ORTHO05D003958 4.4e-26 122.5 299 32.4
EL10Ac3g06828 Beta vulgaris HOM05D003715 ORTHO05D003958 5.8e-26 122.1 270 30.7
Cc06_g23060 Coffea canephora HOM05D003715 ORTHO05D003958 5.8e-26 122.1 102 58.8
CsaV3_4G013240 Cucumis sativus L. HOM05D003715 ORTHO05D003958 7.6e-26 121.7 299 32.4
CiPaw.09G002400 Carya illinoinensis HOM05D003715 ORTHO05D003958 9.9e-26 121.3 257 34.2
Sp6g26180 Schrenkiella parvula HOM05D003715 ORTHO05D003958 9.9e-26 121.3 284 35.2
BolC2t06880H Brassica oleracea HOM05D003715 ORTHO05D003958 1.3e-25 120.9 283 35.0
ClCG04G005350 Citrullus lanatus HOM05D003715 ORTHO05D003958 1.7e-25 120.6 298 33.6
C02p09710 Brassica napus HOM05D003715 ORTHO05D003958 2.2e-25 120.2 283 35.3
A02p04750 Brassica napus HOM05D003715 ORTHO05D003958 2.9e-25 119.8 274 34.7
SalBow1G3164 Salvia bowleyana HOM05D003715 ORTHO05D003958 2.9e-25 119.8 237 37.1
Thhalv10014292m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 3.7e-25 119.4 288 33.7
BolC3t13497H Brassica oleracea HOM05D003715 ORTHO05D003958 8.3e-25 118.2 277 34.3
BraA02t05434Z Brassica rapa HOM05D003715 ORTHO05D003958 8.3e-25 118.2 284 34.5
Nitab4.5_0000394g0140 Nicotiana tabacum HOM05D003715 ORTHO05D003958 8.3e-25 118.2 288 33.7
Sed0021221 Sechium edule HOM05D003715 ORTHO05D003958 8.3e-25 118.2 282 34.8
CSS0027479 Camellia sinensis var. sinensis HOM05D003715 ORTHO05D003958 1.1e-24 117.9 241 38.2
Sed0002226 Sechium edule HOM05D003715 ORTHO05D003958 1.1e-24 117.9 305 32.1
BcaB01g05177 Brassica carinata HOM05D003715 ORTHO05D003958 1.4e-24 117.5 277 34.3
C03p10110 Brassica napus HOM05D003715 ORTHO05D003958 1.4e-24 117.5 277 34.3
BraA03t10190Z Brassica rapa HOM05D003715 ORTHO05D003958 1.4e-24 117.5 277 34.3
A03p08670 Brassica napus HOM05D003715 ORTHO05D003958 2.4e-24 116.7 265 35.8
FAN28G3019 Fragaria x ananassa HOM05D003715 ORTHO05D003958 5.4e-24 115.5 288 34.7
A10p21370 Brassica napus HOM05D003715 ORTHO05D003958 7.1e-24 115.2 279 37.6
Nn7g35866 Nelumbo nucifera HOM05D003715 ORTHO05D003958 7.1e-24 115.2 272 32.7
BcaC03g13579 Brassica carinata HOM05D003715 ORTHO05D003958 9.2e-24 114.8 283 33.6
HanXRQChr14g0438161 Helianthus annuus HOM05D003715 ORTHO05D003958 9.2e-24 114.8 276 34.4
C09p58840 Brassica napus HOM05D003715 ORTHO05D003958 1.2e-23 114.4 280 37.1
MBI04_g47731_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 1.6e-23 114.0 92 58.7
Actinidia38611 Actinidia chinensis HOM05D003715 ORTHO05D003958 2.1e-23 113.6 243 39.5
THA.LOC104820776 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 2.1e-23 113.6 290 34.5
Nitab4.5_0001079g0120 Nicotiana tabacum HOM05D003715 ORTHO05D003958 2.7e-23 113.2 238 34.0
Carub.0006s1642 Capsella rubella HOM05D003715 ORTHO05D003958 3.5e-23 112.8 273 33.7
BcaC05g30247 Brassica carinata HOM05D003715 ORTHO05D003958 4.6e-23 112.5 261 33.3
Rhsim04G0091400 Rhododendron simsii HOM05D006013 ORTHO05D007383 4.6e-23 112.5 234 37.6
AL6G29330 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 7.8e-23 111.7 288 34.7
AT5G18130 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 1.0e-22 111.3 287 33.8
BcaNung05741 Brassica carinata HOM05D003715 ORTHO05D003958 8.6e-22 108.2 261 34.9
BolC1t05801H Brassica oleracea HOM05D003715 ORTHO05D003958 8.6e-22 108.2 265 34.7
arahy.Tifrunner.gnm1.ann1.FCYU2S Arachis hypogaea HOM05D003715 ORTHO05D003958 1.1e-21 107.8 279 35.1
CARHR077990 Cardamine hirsuta HOM05D003715 ORTHO05D003958 1.9e-21 107.1 270 32.6
CARHR194940 Cardamine hirsuta HOM05D003715 ORTHO05D003958 1.9e-21 107.1 281 33.8
Os03g0806600 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 1.9e-21 107.1 248 31.0
vmacro09135 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 1.9e-21 107.1 227 35.7
Carub.0003s0306 Capsella rubella HOM05D003715 ORTHO05D003958 2.5e-21 106.7 284 33.8
Thhalv10021350m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 5.6e-21 105.5 278 31.7
Sp3g02840 Schrenkiella parvula HOM05D003715 ORTHO05D003958 5.6e-21 105.5 269 33.8
A05p43520 Brassica napus HOM05D003715 ORTHO05D003958 7.3e-21 105.1 268 33.6
MBI04_g37012_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 7.3e-21 105.1 89 55.1
BcaB05g23302 Brassica carinata HOM05D003715 ORTHO05D003958 1.6e-20 104.0 95 57.9
BcaC05g29901 Brassica carinata HOM05D003715 ORTHO05D003958 1.6e-20 104.0 258 34.5
BolC5t34973H Brassica oleracea HOM05D003715 ORTHO05D003958 1.6e-20 104.0 258 34.5
BolC9t58728H Brassica oleracea HOM05D003715 ORTHO05D003958 2.8e-20 103.2 130 49.2
Duzib128G0041 Durio zibethinus HOM05D003715 ORTHO05D003958 2.8e-20 103.2 267 31.8
BcaB08g36703 Brassica carinata HOM05D003715 ORTHO05D003958 4.7e-20 102.4 249 36.1
ATR0737G080 Amborella trichopoda HOM05D003715 ORTHO05D003958 6.2e-20 102.1 124 43.5
AT3G03870 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 1.1e-19 101.3 277 32.1
Lsat_1_v5_gn_6_37461 Lactuca sativa HOM05D003715 ORTHO05D003958 1.1e-19 101.3 267 29.6
Aa31LG11G11470 Aethionema arabicum HOM05D003715 ORTHO05D003958 1.8e-19 100.5 262 31.3
Aa31LG5G14450 Aethionema arabicum HOM05D003715 ORTHO05D003958 2.4e-19 100.1 268 33.2
BraA10t44200Z Brassica rapa HOM05D003715 ORTHO05D003958 2.4e-19 100.1 248 37.5
HanXRQChr02g0054571 Helianthus annuus HOM05D003715 ORTHO05D003958 3.1e-19 99.8 266 28.9
Nitab4.5_0009367g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 3.1e-19 99.8 260 32.3
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 5.2e-19 99.0 121 40.5
AL3G13760 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 5.2e-19 99.0 273 32.2
BraA05t23092Z Brassica rapa HOM05D003715 ORTHO05D003958 1.5e-18 97.4 262 32.8
HanXRQChr13g0397871 Helianthus annuus HOM05D003715 ORTHO05D003958 1.5e-18 97.4 259 29.0
ECA233G0839 Erigeron canadensis HOM05D003715 ORTHO05D003958 9.9e-18 94.7 266 30.1
VMungo1383G0996 Vigna mungo HOM05D002467 ORTHO05D013374 9.9e-18 94.7 68 61.8
BcaC05g30288 Brassica carinata HOM05D003715 ORTHO05D003958 1.7e-17 94.0 88 54.5
Aqoxy1G00472 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 4.9e-17 92.4 275 31.6
HPP92_014229 Vanilla planifolia HOM05D035551 ORTHO05D003958 1.1e-16 91.3 251 33.5
THA.LOC104802870 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 5.4e-16 89.0 265 30.9
AUR62032710 Chenopodium quinoa HOM05D003715 ORTHO05D003958 1.0e-14 84.7 243 27.2
Ah.04g153150 Amaranthus hybridus HOM05D003715 ORTHO05D003958 1.3e-14 84.3 256 27.3
Solyc10g080670.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 3.0e-14 83.2 258 32.6
Sopen10g031210 Solanum pennellii HOM05D003715 ORTHO05D003958 3.9e-14 82.8 258 32.9
AUR62032043 Chenopodium quinoa HOM05D003715 ORTHO05D003958 5.1e-14 82.4 243 25.9
Zm00001eb302900 Zea mays HOM05D003715 ORTHO05D003958 5.1e-14 82.4 96 44.8
Duzib106G0556 Durio zibethinus HOM05D003715 ORTHO05D003958 2.5e-13 80.1 250 31.2
Os07g0204100 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 7.3e-13 78.6 95 45.3
THA.LOC104827275 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 2.1e-12 77.0 258 30.2
FAN19G0160 Fragaria x ananassa HOM05D003715 ORTHO05D003958 6.2e-12 75.5 262 28.2
CDE02G4343 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 5.3e-11 72.4 125 40.0
PGSC0003DMG400023700 Solanum tuberosum HOM05D003715 ORTHO05D003958 6.9e-11 72.0 244 27.0
PSO384G3057 Papaver somniferum HOM05D003715 ORTHO05D003958 1.1e-08 64.7 85 36.5
CDE05G3048 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 3.2e-08 63.2 128 35.2
Lsat_1_v5_gn_2_58261 Lactuca sativa HOM05D003715 ORTHO05D003958 5.4e-08 62.4 250 27.6
PSO782G0808 Papaver somniferum HOM05D003715 ORTHO05D003958 1.2e-07 61.2 82 37.8
SEGI_20586 Sequoiadendron giganteum HOM05D003715 ORTHO05D003958 1.6e-07 60.8 92 39.1
Peaxi162Scf00249g00717 Petunia axillaris HOM05D003715 ORTHO05D003958 3.5e-07 59.7 257 30.0
unitig_0.g211 Utricularia gibba HOM05D003715 ORTHO05D003958 1.0e-06 58.2 247 27.1
VMungo1164G0001 Vigna mungo HOM05D003715 ORTHO05D003958 2.3e-06 57.0 68 48.5
Zm00001eb160910 Zea mays HOM05D015210 ORTHO05D003958 3.9e-06 56.2 70 41.4
Zm00001eb160970 Zea mays HOM05D015210 ORTHO05D003958 8.7e-06 55.1 70 40.0


User provided reference genes

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