Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.V14AVL Arachis hypogaea HOM05D000383 ORTHO05D021517 5.4e-21 103.2 46 100.0
arahy.Tifrunner.gnm1.ann1.R607WF Arachis hypogaea HOM05D000383 ORTHO05D021517 1.0e-19 99.0 46 97.8
arahy.Tifrunner.gnm1.ann1.DUH36G Arachis hypogaea HOM05D001300 ORTHO05D021517 3.0e-19 97.4 45 95.6
arahy.Tifrunner.gnm1.ann1.ZUR202 Arachis hypogaea HOM05D000383 ORTHO05D021517 5.0e-19 96.7 42 100.0
arahy.Tifrunner.gnm1.ann1.596IVE Arachis hypogaea HOM05D000383 ORTHO05D021517 8.1e-17 89.4 39 100.0
arahy.Tifrunner.gnm1.ann1.PH2T15 Arachis hypogaea HOM05D000383 ORTHO05D001666 3.4e-15 84.0 38 94.7
arahy.Tifrunner.gnm1.ann1.QUB6RF Arachis hypogaea HOM05D000383 ORTHO05D001666 3.4e-15 84.0 38 94.7
Lj4g0001993 Lotus japonicus HOM05D000383 ORTHO05D001666 1.1e-13 79.0 38 89.5
Glyma.01G148002 Glycine max HOM05D000383 ORTHO05D021517 2.4e-13 77.8 38 86.8
Glyma.11G040700 Glycine max HOM05D000383 ORTHO05D001666 2.4e-13 77.8 38 86.8
Phvul.002G004100 Phaseolus vulgaris HOM05D000383 ORTHO05D001666 2.4e-13 77.8 38 86.8
Glyma.17G151700 Glycine max HOM05D000383 ORTHO05D001666 3.2e-13 77.4 43 76.7
Lalb_Chr09g0329611 Lupinus albus HOM05D000383 ORTHO05D001666 3.2e-13 77.4 43 76.7
arahy.Tifrunner.gnm1.ann1.1RS262 Arachis hypogaea HOM05D000383 ORTHO05D001666 5.4e-13 76.6 38 81.6
Ciclev10032508m.g Citrus clementina HOM05D000383 ORTHO05D001666 5.4e-13 76.6 38 84.2
Phvul.003G228000 Phaseolus vulgaris HOM05D000383 ORTHO05D001666 5.4e-13 76.6 43 74.4
Glyma.01G202100 Glycine max HOM05D000383 ORTHO05D001666 7.1e-13 76.3 38 84.2
Glyma.05G069100 Glycine max HOM05D000383 ORTHO05D001666 7.1e-13 76.3 43 74.4
Ca_22041_v3 Cicer arietinum L. HOM05D000383 ORTHO05D001666 1.2e-12 75.5 38 81.6
Hma1.2p1_0311F.1_g121250 Hydrangea macrophylla HOM05D000383 ORTHO05D001666 1.2e-12 75.5 38 84.2
Manes.17G018100 Manihot esculenta HOM05D000383 ORTHO05D001666 1.2e-12 75.5 38 84.2
arahy.Tifrunner.gnm1.ann1.NU762S Arachis hypogaea HOM05D000383 ORTHO05D001666 1.6e-12 75.1 38 78.9
Lj8C289G1 Lonicera japonica HOM05D000383 ORTHO05D001666 1.6e-12 75.1 38 81.6
Medtr4g098930 Medicago truncatula HOM05D000383 ORTHO05D001666 1.6e-12 75.1 38 81.6
CSS0013120 Camellia sinensis var. sinensis HOM05D000383 ORTHO05D001666 2.1e-12 74.7 38 81.6
CSS0019143 Camellia sinensis var. sinensis HOM05D000383 ORTHO05D001666 2.1e-12 74.7 38 81.6
Haze_08306 Corylus avellana HOM05D000383 ORTHO05D001666 2.7e-12 74.3 38 81.6
Dinv28912 Davidia involucrata HOM05D000383 ORTHO05D001666 2.7e-12 74.3 38 81.6
FAN08G3619 Fragaria x ananassa HOM05D000383 ORTHO05D001666 2.7e-12 74.3 38 81.6
FAN13G1006 Fragaria x ananassa HOM05D000383 ORTHO05D001666 2.7e-12 74.3 38 81.6
QL12p007247 Quercus lobata HOM05D000383 ORTHO05D001666 2.7e-12 74.3 38 81.6
TAR629G3350 Trochodendron aralioides HOM05D000383 ORTHO05D001666 2.7e-12 74.3 37 81.1
vmacro00353 Vaccinium macrocarpon HOM05D000383 ORTHO05D001666 2.7e-12 74.3 38 81.6
Gohir.A08G159900 Gossypium hirsutum HOM05D000383 ORTHO05D001666 3.5e-12 73.9 37 81.1
Gohir.D08G180300 Gossypium hirsutum HOM05D000383 ORTHO05D001666 3.5e-12 73.9 37 81.1
Gorai.004G188800 Gossypium raimondii HOM05D000383 ORTHO05D001666 3.5e-12 73.9 37 81.1
Nn1g00633 Nelumbo nucifera HOM05D000383 ORTHO05D001666 3.5e-12 73.9 37 81.1
Sabra03G0056700 Salix brachista HOM05D000383 ORTHO05D001666 3.5e-12 73.9 38 81.6
TPR.G19182 Trifolium pratense HOM05D000383 ORTHO05D001666 3.5e-12 73.9 38 78.9
COL.COLO4_17115 Corchorus olitorius HOM05D000383 ORTHO05D001666 4.6e-12 73.6 38 78.9
Duzib084G0514 Durio zibethinus HOM05D000383 ORTHO05D001666 4.6e-12 73.6 38 78.9
Gorai.008G229300 Gossypium raimondii HOM05D000383 ORTHO05D001666 4.6e-12 73.6 38 78.9
Nitab4.5_0009567g0010 Nicotiana tabacum HOM05D000383 ORTHO05D001666 4.6e-12 73.6 38 81.6
CiPaw.12G060000 Carya illinoinensis HOM05D000383 ORTHO05D001666 6.0e-12 73.2 38 78.9
Eucgr.E00317 Eucalyptus grandis HOM05D000383 ORTHO05D001666 6.0e-12 73.2 38 78.9
Gohir.D12G213700 Gossypium hirsutum HOM05D000383 ORTHO05D001666 6.0e-12 73.2 38 76.3
Manes.17G018000 Manihot esculenta HOM05D000383 ORTHO05D001666 6.0e-12 73.2 38 81.6
PSO782G5317 Papaver somniferum HOM05D000383 ORTHO05D001666 6.0e-12 73.2 36 83.3
SalBow4G1351 Salvia bowleyana HOM05D000383 ORTHO05D001666 6.0e-12 73.2 38 76.3
Thecc.03G234700 Theobroma cacao HOM05D000383 ORTHO05D001666 6.0e-12 73.2 38 78.9
Actinidia25941 Actinidia chinensis HOM05D000383 ORTHO05D001666 7.8e-12 72.8 38 76.3
Nn6g33681 Nelumbo nucifera HOM05D000383 ORTHO05D001666 7.8e-12 72.8 37 78.4
GSVIVG01013208001 Vitis vinifera HOM05D000383 ORTHO05D001666 7.8e-12 72.8 37 78.4
Lalb_Chr09g0323961 Lupinus albus HOM05D000383 ORTHO05D001666 1.0e-11 72.4 38 84.2
Lalb_Chr16g0379251 Lupinus albus HOM05D000383 ORTHO05D001666 1.0e-11 72.4 38 84.2
Nitab4.5_0002055g0020 Nicotiana tabacum HOM05D000383 ORTHO05D001666 1.0e-11 72.4 38 78.9
Potri.001G147200 Populus trichocarpa HOM05D000383 ORTHO05D001666 1.0e-11 72.4 38 76.3
Solyc08g077330.3 Solanum lycopersicum HOM05D000383 ORTHO05D001666 1.0e-11 72.4 38 78.9
Sopen08g025910 Solanum pennellii HOM05D000383 ORTHO05D001666 1.0e-11 72.4 38 78.9
PGSC0003DMG400001848 Solanum tuberosum HOM05D000383 ORTHO05D001666 1.0e-11 72.4 38 78.9
CiPaw.11G087300 Carya illinoinensis HOM05D000383 ORTHO05D001666 1.3e-11 72.0 43 72.1
Haze_08309 Corylus avellana HOM05D000383 ORTHO05D001666 1.3e-11 72.0 38 78.9
FAN18G3320 Fragaria x ananassa HOM05D000383 ORTHO05D001666 1.3e-11 72.0 38 78.9
Peaxi162Scf00084g00716 Petunia axillaris HOM05D000383 ORTHO05D001666 1.3e-11 72.0 37 81.1
Potri.003G087000 Populus trichocarpa HOM05D000383 ORTHO05D001666 1.3e-11 72.0 38 78.9
Rhsim07G0121500 Rhododendron simsii HOM05D000383 ORTHO05D001666 1.3e-11 72.0 38 76.3
Duzib205G0382 Durio zibethinus HOM05D000383 ORTHO05D001666 1.7e-11 71.6 38 76.3
RcHm_v2.0_Chr7g0208241 Rosa chinensis HOM05D000383 ORTHO05D001666 1.7e-11 71.6 37 78.4
TAR636G0573 Trochodendron aralioides HOM05D000383 ORTHO05D001666 1.7e-11 71.6 37 75.7
RhsimUnG0093600 Rhododendron simsii HOM05D000383 ORTHO05D001666 2.3e-11 71.2 38 78.9
vmacro14144 Vaccinium macrocarpon HOM05D000383 ORTHO05D001666 2.3e-11 71.2 38 73.7
CSS0012644 Camellia sinensis var. sinensis HOM05D000383 ORTHO05D001666 3.9e-11 70.5 38 78.9
PSO478G3108 Papaver somniferum HOM05D000383 ORTHO05D001666 3.9e-11 70.5 36 80.6
Prupe.5G047300 Prunus persica HOM05D000383 ORTHO05D001666 3.9e-11 70.5 38 78.9
Sopen08g003030 Solanum pennellii HOM05D000383 ORTHO05D001666 3.9e-11 70.5 38 78.9
CAN.G572.39 Capsicum annuum HOM05D000383 ORTHO05D001666 5.1e-11 70.1 38 76.3
Cfa012378 Carpinus fangiana HOM05D000383 ORTHO05D001666 5.1e-11 70.1 38 76.3
TWI60G1430 Tripterygium wilfordii HOM05D000383 ORTHO05D001666 5.1e-11 70.1 38 78.9
CAN.G845.30 Capsicum annuum HOM05D000383 ORTHO05D001666 8.6e-11 69.3 38 76.3
AUR62018781 Chenopodium quinoa HOM05D000383 ORTHO05D001666 8.6e-11 69.3 37 78.4
HanXRQChr17g0535741 Helianthus annuus HOM05D000383 ORTHO05D001666 8.6e-11 69.3 38 76.3
PGSC0003DMG400020497 Solanum tuberosum HOM05D000383 ORTHO05D001666 8.6e-11 69.3 38 76.3
ECA246G1502 Erigeron canadensis HOM05D000383 ORTHO05D001666 1.1e-10 68.9 38 76.3
Sabra01G0115700 Salix brachista HOM05D000383 ORTHO05D001666 1.1e-10 68.9 37 78.4
TWI15G0377 Tripterygium wilfordii HOM05D000383 ORTHO05D001666 1.1e-10 68.9 38 78.9
Actinidia10878 Actinidia chinensis HOM05D000383 ORTHO05D001666 2.5e-10 67.8 38 76.3
Cc08_g01830 Coffea canephora HOM05D000383 ORTHO05D001666 2.5e-10 67.8 37 78.4
Cc08_g01860 Coffea canephora HOM05D000383 ORTHO05D001666 2.5e-10 67.8 37 78.4
DCAR_024980 Daucus carota HOM05D000383 ORTHO05D001666 2.5e-10 67.8 42 66.7
Ah.12g053700 Amaranthus hybridus HOM05D000383 ORTHO05D001666 3.3e-10 67.4 37 75.7
EL10As14g24076 Beta vulgaris HOM05D000383 ORTHO05D001666 3.3e-10 67.4 37 75.7
AUR62007220 Chenopodium quinoa HOM05D000383 ORTHO05D001666 4.3e-10 67.0 37 75.7
Dinv25181 Davidia involucrata HOM05D000383 ORTHO05D001666 4.3e-10 67.0 37 78.4
Hund14432 Selenicereus undatus HOM05D000383 ORTHO05D001666 4.3e-10 67.0 42 66.7
Sc22g0001360 Simmondsia chinensis HOM05D000383 ORTHO05D001666 4.3e-10 67.0 37 73.0
Actinidia31474 Actinidia chinensis HOM05D000383 ORTHO05D001666 5.6e-10 66.6 38 76.3
MSTRG.25874 Avicennia marina HOM05D000383 ORTHO05D001666 7.3e-10 66.2 38 71.1
Migut.A00275 Erythranthe guttata HOM05D000383 ORTHO05D001666 7.3e-10 66.2 38 71.1
Lj2A247T89 Lonicera japonica HOM05D000383 ORTHO05D001666 7.3e-10 66.2 38 68.4
CANSAT21G0476 Cannabis sativa HOM05D000383 ORTHO05D001666 9.5e-10 65.9 37 73.0
PGR042G0977 Punica granatum HOM05D000383 ORTHO05D001666 9.5e-10 65.9 38 76.3
Hund11273 Selenicereus undatus HOM05D000383 ORTHO05D001666 9.5e-10 65.9 37 73.0
MELO3C003371.2 Cucumis melo HOM05D000383 ORTHO05D001666 2.1e-09 64.7 38 73.7
DCAR_024979 Daucus carota HOM05D000383 ORTHO05D001666 6.2e-09 63.2 38 65.8
ClCG09G012380 Citrullus lanatus HOM05D000383 ORTHO05D001666 8.1e-09 62.8 37 73.0
CsaV3_3G049550 Cucumis sativus L. HOM05D000383 ORTHO05D001666 8.1e-09 62.8 37 73.0
Sed0009214 Sechium edule HOM05D000383 ORTHO05D001666 8.1e-09 62.8 37 73.0
HPP92_014866 Vanilla planifolia HOM05D000383 ORTHO05D001666 8.1e-09 62.8 36 75.0
Os07g0496250 Oryza sativa ssp. japonica HOM05D000383 ORTHO05D001666 1.4e-08 62.0 36 69.4
MD06G1041000 Malus domestica HOM05D000383 ORTHO05D001666 1.8e-08 61.6 38 71.1
THA.LOC104820141 Tarenaya hassleriana HOM05D000383 ORTHO05D001666 3.4e-07 57.4 37 67.6
Peaxi162Scf00102g00734 Petunia axillaris HOM05D000383 ORTHO05D001666 2.2e-06 54.7 61 45.9
Gohir.A12G211100 Gossypium hirsutum HOM05D000383 ORTHO05D001666 2.9e-06 54.3 38 65.8
Nitab4.5_0010461g0020 Nicotiana tabacum HOM05D000383 ORTHO05D001666 2.9e-06 54.3 38 65.8


User provided reference genes

Program Settings