Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.UXAL1K Arachis hypogaea HOM05D000963 ORTHO05D011117 1.1e-156 556.6 281 100.0
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 8.9e-58 228.0 131 88.5
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 5.0e-53 212.2 177 67.8
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 2.8e-51 206.5 218 55.0
DCAR_001146 Daucus carota HOM05D000963 ORTHO05D005131 3.4e-49 199.5 105 95.2
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 9.2e-47 191.4 240 50.4
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 8.6e-45 184.9 229 49.8
arahy.Tifrunner.gnm1.ann1.URY1CV Arachis hypogaea HOM05D000533 ORTHO05D011117 1.9e-44 183.7 97 95.9
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 4.4e-41 172.6 87 96.6
Oeu054373.3 Olea europaea HOM05D000540 ORTHO05D000681 5.8e-41 172.2 129 72.9
Sopen01g027140 Solanum pennellii HOM05D000963 ORTHO05D011117 1.4e-39 167.5 94 88.3
BcaC04g20703 Brassica carinata HOM05D000963 ORTHO05D011117 1.9e-39 167.2 98 86.7
BcaC04g20780 Brassica carinata HOM05D000963 ORTHO05D011117 1.9e-39 167.2 98 86.7
BcaNung07084 Brassica carinata HOM05D000963 ORTHO05D011117 1.9e-39 167.2 98 86.7
CSS0012622 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D011117 2.4e-39 166.8 97 88.7
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.1e-38 163.7 94 89.4
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.1e-38 163.7 94 89.4
C04p22530 Brassica napus HOM05D000963 ORTHO05D011117 3.5e-38 162.9 98 85.7
C09p24690 Brassica napus HOM05D000963 ORTHO05D011117 3.5e-38 162.9 98 85.7
C09p39370 Brassica napus HOM05D000963 ORTHO05D011117 3.5e-38 162.9 98 85.7
BolSC47t61068H Brassica oleracea HOM05D000963 ORTHO05D011117 3.5e-38 162.9 98 85.7
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 3.5e-38 162.9 96 86.5
Sopen06g015040 Solanum pennellii HOM05D000963 ORTHO05D011117 4.6e-38 162.5 94 88.3
MELO3C033790.2 Cucumis melo HOM05D000963 ORTHO05D011117 7.8e-38 161.8 87 93.1
unitig_8.g4107 Utricularia gibba HOM05D000963 ORTHO05D011117 2.3e-37 160.2 94 87.2
Cpa.g.sc2719.1 Carica papaya HOM05D000963 ORTHO05D011117 3.9e-37 159.5 88 90.9
MELO3C027127.2 Cucumis melo HOM05D000963 ORTHO05D011117 5.1e-37 159.1 89 91.0
Oeu039801.1 Olea europaea HOM05D000963 ORTHO05D005131 3.6e-35 152.9 87 87.4
Oeu038562.1 Olea europaea HOM05D000963 ORTHO05D011117 2.0e-33 147.1 88 85.2
PGSC0003DMG400039021 Solanum tuberosum HOM05D000963 ORTHO05D010201 7.1e-31 138.7 80 87.5
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 6.0e-30 135.6 91 78.0
MELO3C028157.2 Cucumis melo HOM05D000963 ORTHO05D011117 7.8e-30 135.2 71 94.4
ECA169G0003 Erigeron canadensis HOM05D000963 ORTHO05D005131 3.9e-29 132.9 67 97.0
PGSC0003DMG400018892 Solanum tuberosum HOM05D000963 ORTHO05D005131 3.9e-29 132.9 67 97.0
unitig_8.g4106 Utricularia gibba HOM05D000963 ORTHO05D005131 3.9e-29 132.9 67 97.0
VMungo0720G2312 Vigna mungo HOM05D000963 ORTHO05D005131 3.9e-29 132.9 67 97.0
SHI36890 Sapria himalayana HOM05D000963 ORTHO05D005131 8.7e-29 131.7 108 65.7
Sopen02g009100 Solanum pennellii HOM05D000963 ORTHO05D005131 8.7e-29 131.7 67 95.5
arahy.Tifrunner.gnm1.ann1.J9XL5M Arachis hypogaea HOM05D000963 ORTHO05D005131 1.1e-28 131.3 67 97.0
unitig_87.g27920 Utricularia gibba HOM05D000963 ORTHO05D001540 1.9e-28 130.6 67 95.5
DCAR_032037 Daucus carota HOM05D000963 ORTHO05D005131 3.3e-28 129.8 67 95.5
EL10As10g23961 Beta vulgaris HOM05D000963 ORTHO05D005131 4.3e-28 129.4 108 64.8
Gohir.D03G074448 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.3e-28 129.4 65 96.9
arahy.Tifrunner.gnm1.ann1.LWFR1C Arachis hypogaea HOM05D000963 ORTHO05D005131 7.3e-28 128.6 87 78.2
BcaB02g11354 Brassica carinata HOM05D000963 ORTHO05D011117 7.3e-28 128.6 70 90.0
arahy.Tifrunner.gnm1.ann1.ZFFY2U Arachis hypogaea HOM05D000963 ORTHO05D005131 2.1e-27 127.1 79 83.5
MBI08_g48228_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 2.4e-26 123.6 79 81.0
HPP92_028387 Vanilla planifolia HOM05D000963 ORTHO05D005131 4.0e-26 122.9 67 91.0
Gohir.A12G092444 Gossypium hirsutum HOM05D000963 ORTHO05D005131 5.2e-26 122.5 65 90.8
EL10Ac6g15367 Beta vulgaris HOM05D000963 ORTHO05D011117 6.9e-26 122.1 178 48.3
Ca_03776_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 5.8e-25 119.0 114 61.4
Ca_03777_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 5.8e-25 119.0 114 61.4
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 1.7e-24 117.5 62 93.5
MELO3C028252.2 Cucumis melo HOM05D000963 ORTHO05D011117 3.8e-24 116.3 62 93.5
Lsat_1_v5_gn_9_35301 Lactuca sativa HOM05D000963 ORTHO05D005131 2.4e-23 113.6 108 57.4
Hma1.2p1_0016F.1_g010990 Hydrangea macrophylla HOM05D000963 ORTHO05D011117 4.2e-23 112.8 78 76.9
Oeu015125.1 Olea europaea HOM05D000963 ORTHO05D010201 9.6e-20 101.7 96 60.4
Sc08g0004380 Simmondsia chinensis HOM05D000963 ORTHO05D011117 9.6e-20 101.7 75 74.7
arahy.Tifrunner.gnm1.ann1.H1VL0A Arachis hypogaea HOM05D000963 ORTHO05D011117 1.4e-18 97.8 69 72.5
Migut.D01399 Erythranthe guttata HOM05D000963 ORTHO05D011117 6.9e-18 95.5 55 83.6
SHI36891 Sapria himalayana HOM05D000963 ORTHO05D011117 2.0e-17 94.0 84 65.5
VMungo1024G0004 Vigna mungo HOM05D000963 ORTHO05D011117 3.8e-16 89.7 70 64.3
FAN10G3847 Fragaria x ananassa HOM05D000367 ORTHO05D001227 1.1e-15 88.2 76 64.5
BcaC04g22599 Brassica carinata HOM05D000963 ORTHO05D011117 5.4e-15 85.9 64 70.3
arahy.Tifrunner.gnm1.ann1.SH46T5 Arachis hypogaea HOM05D000963 ORTHO05D005131 1.6e-14 84.3 87 56.3
TAR629G1823 Trochodendron aralioides HOM05D001041 ORTHO05D000846 1.6e-14 84.3 55 80.0
MELO3C030559.2 Cucumis melo HOM05D000963 ORTHO05D011117 4.6e-14 82.8 41 92.7
BraSC143t45648Z Brassica rapa HOM05D000963 ORTHO05D011117 7.9e-14 82.0 42 90.5
BraSC58t46452Z Brassica rapa HOM05D000963 ORTHO05D011117 3.0e-13 80.1 47 85.1
Oeu048363.1 Olea europaea HOM05D000963 ORTHO05D018542 1.5e-12 77.8 61 67.2
CSS0000719 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D005131 1.9e-12 77.4 67 67.2
C06p23110 Brassica napus HOM05D000963 ORTHO05D005131 4.3e-12 76.3 36 97.2
C09p24700 Brassica napus HOM05D000963 ORTHO05D005131 4.3e-12 76.3 36 97.2
C09p39380 Brassica napus HOM05D000963 ORTHO05D005131 4.3e-12 76.3 36 97.2
BraSC143t45666Z Brassica rapa HOM05D000963 ORTHO05D005131 4.3e-12 76.3 36 97.2
BraSC25t45900Z Brassica rapa HOM05D000963 ORTHO05D005131 4.3e-12 76.3 36 97.2
BraSC59t46558Z Brassica rapa HOM05D000963 ORTHO05D005131 4.3e-12 76.3 36 97.2
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.3e-12 76.3 36 97.2
arahy.Tifrunner.gnm1.ann1.BMCQ1I Arachis hypogaea HOM05D000963 ORTHO05D005131 7.4e-12 75.5 99 51.5
arahy.Tifrunner.gnm1.ann1.LAST4K Arachis hypogaea HOM05D000963 ORTHO05D005131 9.6e-12 75.1 42 85.7
Eucgr.I00427 Eucalyptus grandis HOM05D000963 ORTHO05D011117 1.6e-11 74.3 81 53.1
BolSC46t60969H Brassica oleracea HOM05D000963 ORTHO05D005131 8.1e-11 72.0 88 55.7
SHI36398 Sapria himalayana HOM05D000963 ORTHO05D005131 1.1e-10 71.6 36 91.7
arahy.Tifrunner.gnm1.ann1.JE53Y0 Arachis hypogaea HOM05D000963 ORTHO05D005131 1.2e-09 68.2 32 96.9
Peaxi162Scf00224g00612 Petunia axillaris HOM05D012761 ORTHO05D013554 3.4e-09 66.6 102 43.1
Gohir.D12G186150 Gossypium hirsutum HOM05D000963 ORTHO05D011117 4.5e-09 66.2 46 76.1
arahy.Tifrunner.gnm1.ann1.NK9AGX Arachis hypogaea HOM05D000089 ORTHO05D011117 5.8e-09 65.9 36 91.7
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 9.9e-09 65.1 44 65.9
BraSC138t45525Z Brassica rapa HOM05D000963 ORTHO05D011117 2.9e-08 63.5 36 88.9
Medtr8g040260 Medicago truncatula HOM05D000963 ORTHO05D005131 1.1e-07 61.6 34 85.3
BraA07t28395Z Brassica rapa HOM05D000963 ORTHO05D005131 1.9e-07 60.8 41 75.6
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 1.9e-07 60.8 38 81.6
Sc22g0004610 Simmondsia chinensis HOM05D000963 ORTHO05D011117 1.9e-07 60.8 35 85.7
BcaC07g42443 Brassica carinata HOM05D003314 ORTHO05D004164 4.2e-07 59.7 44 68.2
PGSC0003DMG400001215 Solanum tuberosum HOM05D000963 ORTHO05D005131 5.5e-07 59.3 34 76.5
Oeu012784.1 Olea europaea HOM05D000963 ORTHO05D005131 1.2e-06 58.2 36 75.0
Cfa023002 Carpinus fangiana HOM05D000963 ORTHO05D011117 2.7e-06 57.0 29 89.7
Sopen09g017480 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-06 57.0 42 66.7
CAN.G631.45 Capsicum annuum HOM05D000550 ORTHO05D009781 3.5e-06 56.6 124 39.5
HPP92_025570 Vanilla planifolia HOM05D000963 ORTHO05D011117 7.9e-06 55.5 52 53.8


User provided reference genes

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