Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.UVG9XA Arachis hypogaea HOM05D001966 ORTHO05D010127 1.7e-66 255.8 123 100.0
arahy.Tifrunner.gnm1.ann1.CV40CV Arachis hypogaea HOM05D001966 ORTHO05D010127 1.8e-39 166.0 96 81.2
Nitab4.5_0003644g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 2.6e-38 162.2 96 79.2
FAN13G1592 Fragaria x ananassa HOM05D001966 ORTHO05D010127 7.1e-36 154.1 96 77.1
arahy.Tifrunner.gnm1.ann1.SGU002 Arachis hypogaea HOM05D000213 ORTHO05D000426 8.7e-34 147.1 118 67.8
Peaxi162Scf01071g00036 Petunia axillaris HOM05D001966 ORTHO05D010127 4.8e-32 141.4 94 77.7
Gohir.1Z050082 Gossypium hirsutum HOM05D001966 ORTHO05D010127 1.0e-29 133.7 72 88.9
Gohir.A04G039225 Gossypium hirsutum HOM05D001966 ORTHO05D010127 1.0e-29 133.7 72 88.9
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 2.5e-28 129.0 96 69.8
Gohir.A01G139755 Gossypium hirsutum HOM05D001966 ORTHO05D010127 5.5e-28 127.9 72 84.7
Gohir.1Z049792 Gossypium hirsutum HOM05D001966 ORTHO05D010127 2.1e-27 125.9 68 88.2
Gohir.A06G123204 Gossypium hirsutum HOM05D001966 ORTHO05D010127 4.6e-27 124.8 72 83.3
Sopen11g020180 Solanum pennellii HOM05D001966 ORTHO05D010127 2.3e-26 122.5 72 80.6
arahy.Tifrunner.gnm1.ann1.WY6BZE Arachis hypogaea HOM05D004182 ORTHO05D010127 1.8e-23 112.8 72 79.2
Gohir.D01G134240 Gossypium hirsutum HOM05D001966 ORTHO05D010127 2.4e-23 112.5 72 76.4
Gorai.007G150800 Gossypium raimondii HOM05D001966 ORTHO05D010127 2.4e-23 112.5 61 86.9
Gorai.002G166100 Gossypium raimondii HOM05D001966 ORTHO05D010127 6.9e-23 110.9 72 76.4
arahy.Tifrunner.gnm1.ann1.71HDHZ Arachis hypogaea HOM05D001966 ORTHO05D010127 1.3e-21 106.7 61 80.3
Gorai.011G180000 Gossypium raimondii HOM05D001966 ORTHO05D010127 2.2e-21 105.9 72 72.2
Gohir.D11G140550 Gossypium hirsutum HOM05D001966 ORTHO05D010127 3.8e-21 105.1 61 82.0
Cpa.g.sc120.41 Carica papaya HOM05D001966 ORTHO05D010127 5.0e-21 104.8 51 94.1
Gohir.D11G306003 Gossypium hirsutum HOM05D001966 ORTHO05D010127 6.5e-21 104.4 75 70.7
Gorai.007G326200 Gossypium raimondii HOM05D001966 ORTHO05D010127 1.4e-20 103.2 63 79.4
Nitab4.5_0001577g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 1.6e-19 99.8 55 83.6
Sopen02g002730 Solanum pennellii HOM05D004182 ORTHO05D007321 7.9e-19 97.4 101 54.5
Lsat_1_v5_gn_6_14541 Lactuca sativa HOM05D001966 ORTHO05D010127 1.4e-18 96.7 96 54.2
Oeu012760.1 Olea europaea HOM05D001966 ORTHO05D010127 3.1e-15 85.5 92 51.1
Glyma.20G027700 Glycine max HOM05D001966 ORTHO05D010127 4.1e-15 85.1 64 62.5
arahy.Tifrunner.gnm1.ann1.9XT8BN Arachis hypogaea HOM05D001966 ORTHO05D010127 9.1e-15 84.0 44 88.6
arahy.Tifrunner.gnm1.ann1.H5WC3R Arachis hypogaea HOM05D001966 ORTHO05D011119 9.1e-15 84.0 44 88.6
arahy.Tifrunner.gnm1.ann1.U90T8C Arachis hypogaea HOM05D004182 ORTHO05D010127 9.1e-15 84.0 44 88.6
Phvul.008G246600 Phaseolus vulgaris HOM05D001966 ORTHO05D010127 2.0e-14 82.8 63 69.8
A08p09050 Brassica napus HOM05D001966 ORTHO05D010127 2.6e-14 82.4 62 67.7
LjContig00318g0013893 Lotus japonicus HOM05D004182 ORTHO05D007321 3.4e-14 82.0 44 86.4
Glyma.05G084375 Glycine max HOM05D004182 ORTHO05D010127 7.7e-14 80.9 57 66.7
Peaxi162Scf00263g00168 Petunia axillaris HOM05D001966 ORTHO05D010127 1.7e-13 79.7 104 45.2
Cpa.g.sc302.2 Carica papaya HOM05D001966 ORTHO05D010127 2.9e-13 79.0 44 84.1
Gohir.1Z050966 Gossypium hirsutum HOM05D001966 ORTHO05D010127 2.9e-13 79.0 44 84.1
EL10Ac7g17373 Beta vulgaris HOM05D004182 ORTHO05D010127 1.4e-12 76.6 44 81.8
TPR.G18363 Trifolium pratense HOM05D000107 ORTHO05D000062 7.2e-12 74.3 44 79.5
Nn029s41582 Nelumbo nucifera HOM05D001966 ORTHO05D010127 9.4e-12 73.9 44 79.5
Nn031s41607 Nelumbo nucifera HOM05D001966 ORTHO05D010127 9.4e-12 73.9 44 79.5
Nn064s42219 Nelumbo nucifera HOM05D001966 ORTHO05D010127 9.4e-12 73.9 44 79.5
Nn212s45204 Nelumbo nucifera HOM05D001966 ORTHO05D010127 9.4e-12 73.9 44 79.5
Nn264s45948 Nelumbo nucifera HOM05D001966 ORTHO05D010127 9.4e-12 73.9 44 79.5
Nn304s46230 Nelumbo nucifera HOM05D001966 ORTHO05D010127 9.4e-12 73.9 44 79.5
Nn349s46476 Nelumbo nucifera HOM05D001966 ORTHO05D010127 9.4e-12 73.9 44 79.5
Nn403s46569 Nelumbo nucifera HOM05D001966 ORTHO05D010127 9.4e-12 73.9 44 79.5
Nn442s46689 Nelumbo nucifera HOM05D001966 ORTHO05D010127 9.4e-12 73.9 44 79.5
Nn4g25380 Nelumbo nucifera HOM05D001966 ORTHO05D010127 9.4e-12 73.9 44 79.5
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.1e-11 72.8 54 66.7
Nitab4.5_0007400g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010127 2.7e-11 72.4 54 66.7
Lsat_1_v5_gn_6_14561 Lactuca sativa HOM05D001966 ORTHO05D010127 3.6e-11 72.0 42 78.6
Nitab4.5_0006306g0030 Nicotiana tabacum HOM05D001966 ORTHO05D010127 4.7e-11 71.6 45 75.6
Oeu008622.1 Olea europaea HOM05D000866 ORTHO05D000673 6.1e-11 71.2 92 46.7
Cpa.g.sc2529.2 Carica papaya HOM05D004182 ORTHO05D010127 1.0e-10 70.5 43 79.1
Nn6g32819 Nelumbo nucifera HOM05D001966 ORTHO05D010127 1.0e-10 70.5 46 71.7
Nn1g00555 Nelumbo nucifera HOM05D001966 ORTHO05D010127 3.0e-10 68.9 46 69.6
arahy.Tifrunner.gnm1.ann1.MHEL4J Arachis hypogaea HOM05D001966 ORTHO05D011119 8.8e-10 67.4 60 56.7
Nitab4.5_0012517g0030 Nicotiana tabacum HOM05D004182 ORTHO05D010127 2.6e-09 65.9 36 77.8
BolSC46t60966H Brassica oleracea HOM05D004182 ORTHO05D007321 5.7e-09 64.7 82 48.8
Oeu022559.1 Olea europaea HOM05D001966 ORTHO05D011119 7.4e-09 64.3 83 44.6
BcaC04g20783 Brassica carinata HOM05D004182 ORTHO05D010127 1.3e-08 63.5 34 85.3
Nitab4.5_0018109g0010 Nicotiana tabacum HOM05D001966 ORTHO05D010127 2.2e-08 62.8 35 82.9
Gohir.A05G327708 Gossypium hirsutum HOM05D001966 ORTHO05D010127 2.8e-08 62.4 34 82.4
Peaxi162Scf00080g00510 Petunia axillaris HOM05D011856 ORTHO05D013014 1.1e-07 60.5 33 84.8
VMungo0720G0997 Vigna mungo HOM05D004182 ORTHO05D007321 3.1e-07 58.9 30 90.0
PGSC0003DMG400013043 Solanum tuberosum HOM05D034867 ORTHO05D030679 7.7e-06 54.3 51 58.8


User provided reference genes

Program Settings