Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 1.4e-295 1018.8 515 100.0
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 3.9e-293 1010.7 515 99.0
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 2.2e-243 845.5 508 84.6
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 6.3e-243 844.0 510 84.9
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 4.1e-242 841.3 508 83.7
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 3.0e-237 825.1 513 82.3
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 3.2e-231 805.1 512 80.3
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 2.0e-225 785.8 484 83.1
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 1.3e-224 783.1 511 79.3
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 2.9e-224 781.9 510 80.0
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 3.2e-223 778.5 511 78.7
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 2.6e-212 742.3 477 77.4
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 3.8e-208 728.4 507 73.2
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 4.7e-206 721.5 509 72.3
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 8.0e-206 720.7 463 77.5
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 2.3e-205 719.2 509 73.3
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 3.0e-205 718.8 506 72.5
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 3.0e-205 718.8 506 72.5
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 4.0e-205 718.4 506 73.5
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 4.0e-205 718.4 500 73.4
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 4.0e-205 718.4 463 77.1
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 2.0e-204 716.1 456 77.0
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 2.6e-204 715.7 537 70.2
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 3.4e-204 715.3 456 77.0
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 4.4e-204 714.9 455 77.4
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 1.3e-203 713.4 459 77.8
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 1.7e-203 713.0 456 76.8
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 2.8e-203 712.2 499 72.7
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 4.8e-203 711.4 500 72.6
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 4.8e-203 711.4 454 77.5
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 6.3e-203 711.1 492 74.4
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 2.4e-202 709.1 456 76.5
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 3.1e-202 708.8 497 72.8
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 7.0e-202 707.6 508 71.3
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 9.1e-202 707.2 515 70.5
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 3.5e-201 705.3 493 71.6
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 4.5e-201 704.9 506 69.8
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 1.7e-200 703.0 485 75.9
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 1.7e-200 703.0 468 74.8
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 6.6e-200 701.0 514 69.3
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 1.5e-199 699.9 506 69.6
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 1.9e-199 699.5 519 68.6
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 9.5e-199 697.2 495 71.5
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 1.6e-198 696.4 512 68.9
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 2.1e-198 696.0 450 76.9
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 2.1e-198 696.0 510 69.2
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 6.1e-198 694.5 512 68.8
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 8.0e-198 694.1 511 70.1
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 8.3e-195 684.1 517 67.3
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 1.6e-193 679.9 454 73.6
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 1.5e-191 673.3 470 71.7
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 9.5e-191 670.6 506 67.0
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 3.1e-189 665.6 446 73.3
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 3.1e-189 665.6 446 73.3
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 3.4e-188 662.1 513 65.3
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 4.4e-188 661.8 515 67.0
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 4.4e-188 661.8 508 66.3
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 5.8e-188 661.4 446 73.1
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 4.9e-187 658.3 451 73.6
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 1.4e-186 656.8 444 73.0
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 1.7e-184 649.8 455 69.7
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 3.0e-184 649.0 453 70.9
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 5.8e-180 634.8 443 70.7
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 1.7e-179 633.3 449 68.6
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 1.7e-179 633.3 405 77.5
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 3.7e-179 632.1 523 63.7
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 6.4e-179 631.3 454 68.5
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 6.4e-179 631.3 449 70.2
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 2.7e-177 625.9 527 63.0
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 3.0e-176 622.5 449 67.0
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 5.1e-176 621.7 449 68.2
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 6.6e-176 621.3 511 61.6
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 2.5e-175 619.4 449 67.0
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 9.5e-175 617.5 499 63.7
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 1.6e-174 616.7 419 71.8
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 2.8e-174 615.9 472 65.7
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 2.8e-174 615.9 441 68.7
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 8.3e-171 604.4 440 66.4
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 2.4e-170 602.8 515 59.0
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 2.1e-169 599.7 494 61.7
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 1.7e-168 596.7 510 60.0
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 2.3e-168 596.3 445 65.4
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 3.0e-168 595.9 449 64.1
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 8.6e-168 594.3 456 63.2
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 1.1e-167 594.0 502 60.8
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 5.6e-167 591.7 478 61.3
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 1.2e-166 590.5 453 63.6
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 1.2e-166 590.5 476 61.8
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 1.6e-166 590.1 476 61.3
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 4.0e-165 585.5 493 62.1
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 4.9e-163 578.6 446 63.9
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 3.5e-161 572.4 445 62.9
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 2.6e-156 556.2 381 73.8
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 1.7e-152 543.5 398 68.6
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 3.1e-149 532.7 354 72.6
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 5.3e-141 505.4 468 54.7
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 6.9e-141 505.0 491 53.4
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 9.9e-140 501.1 458 56.8
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 1.6e-126 457.2 433 57.0
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 1.2e-121 441.0 295 74.6
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 2.0e-111 407.1 424 46.9
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 1.4e-109 401.0 343 57.4
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 3.1e-109 399.8 257 74.7
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.5e-95 354.4 423 49.4
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 5.7e-87 325.9 438 40.2
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 2.5e-82 310.5 233 68.7
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 2.9e-75 287.0 210 71.9
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 2.3e-67 260.8 429 36.4
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 2.8e-65 253.8 151 79.5
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 1.5e-63 248.1 433 34.2
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 5.1e-59 233.0 134 83.6
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 4.0e-48 196.8 171 57.9
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 3.9e-35 153.7 228 41.7
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 1.5e-34 151.8 228 41.2
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 3.3e-34 150.6 141 58.9
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 4.8e-33 146.7 200 40.0
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 6.2e-33 146.4 127 57.5
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 1.5e-31 141.7 126 57.1
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 2.2e-14 84.7 143 36.4


User provided reference genes

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