Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.UNR197 Arachis hypogaea HOM05D006775 ORTHO05D008344 2.7e-155 552.0 285 100.0
arahy.Tifrunner.gnm1.ann1.HV9WHL Arachis hypogaea HOM05D006775 ORTHO05D008344 1.1e-153 546.6 285 97.5
Glyma.07G251400 Glycine max HOM05D006775 ORTHO05D008344 5.0e-109 398.3 257 75.5
Phvul.003G101000 Phaseolus vulgaris HOM05D006775 ORTHO05D008344 4.7e-107 391.7 256 73.8
VMungo1215G1959 Vigna mungo HOM05D006775 ORTHO05D008344 2.0e-105 386.3 256 73.0
Lalb_Chr13g0303871 Lupinus albus HOM05D006775 ORTHO05D008344 5.4e-103 378.3 250 73.6
Glyma.17G022900 Glycine max HOM05D006775 ORTHO05D008344 3.1e-98 362.5 252 72.2
Lj4g0016853 Lotus japonicus HOM05D006775 ORTHO05D008344 1.1e-92 344.0 263 67.7
Medtr4g118790 Medicago truncatula HOM05D006775 ORTHO05D008344 1.1e-92 344.0 252 65.5
TPR.G14956 Trifolium pratense HOM05D006775 ORTHO05D008344 1.7e-88 330.1 257 61.5
Psat4g030400 Pisum sativum HOM05D006775 ORTHO05D008344 9.2e-87 324.3 257 61.1
Psat4g030480 Pisum sativum HOM05D006775 ORTHO05D008344 3.0e-85 319.3 252 60.3
QL06p007489 Quercus lobata HOM05D006775 ORTHO05D008344 3.3e-76 289.3 252 56.0
COL.COLO4_13925 Corchorus olitorius HOM05D006775 ORTHO05D008344 1.8e-74 283.5 252 56.0
Cfa015346 Carpinus fangiana HOM05D006775 ORTHO05D008344 2.4e-74 283.1 255 55.7
Manes.15G016600 Manihot esculenta HOM05D006775 ORTHO05D008344 1.2e-73 280.8 258 52.7
Atru.chr4.2756 Acer truncatum HOM05D006775 ORTHO05D008344 5.8e-73 278.5 253 51.8
Ca_21549_v3 Cicer arietinum L. HOM05D006775 ORTHO05D008344 1.7e-72 276.9 265 54.0
Thecc.04G277900 Theobroma cacao HOM05D006775 ORTHO05D008344 1.7e-72 276.9 252 54.8
Ciclev10006777m.g Citrus clementina HOM05D000611 ORTHO05D000809 5.4e-71 271.9 246 54.5
Duzib151G0911 Durio zibethinus HOM05D006775 ORTHO05D008344 5.6e-68 261.9 237 56.5
PGR004G1240 Punica granatum HOM05D006775 ORTHO05D008344 2.1e-67 260.0 255 50.2
SalBow2G3406 Salvia bowleyana HOM05D006775 ORTHO05D008344 4.8e-67 258.8 259 50.2
Actinidia40225 Actinidia chinensis HOM05D006775 ORTHO05D008344 6.2e-67 258.5 258 48.4
MSTRG.10056 Avicennia marina HOM05D006775 ORTHO05D008344 6.2e-67 258.5 257 49.8
Eucgr.H03770 Eucalyptus grandis HOM05D006775 ORTHO05D008344 5.3e-66 255.4 259 51.4
Gohir.D10G166800 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.2e-65 254.2 248 50.8
Potri.008G204800 Populus trichocarpa HOM05D006775 ORTHO05D008344 1.5e-65 253.8 250 50.8
Sc25g0004760 Simmondsia chinensis HOM05D006775 ORTHO05D008344 2.2e-64 250.0 255 49.0
SGA_v2.0_scaffold57G20240 Striga asiatica HOM05D006775 ORTHO05D008344 3.8e-64 249.2 259 47.1
Nitab4.5_0005595g0020 Nicotiana tabacum HOM05D006775 ORTHO05D008344 6.4e-64 248.4 261 49.4
Gorai.011G186100 Gossypium raimondii HOM05D006775 ORTHO05D008344 1.1e-63 247.7 248 50.4
Lsat_1_v5_gn_5_50761 Lactuca sativa HOM05D006775 ORTHO05D008344 1.1e-63 247.7 255 49.0
CiPaw.02G086400 Carya illinoinensis HOM05D006775 ORTHO05D008344 1.9e-63 246.9 245 51.0
Migut.G00207 Erythranthe guttata HOM05D006775 ORTHO05D008344 9.3e-63 244.6 259 45.2
Lj3A812T71 Lonicera japonica HOM05D006775 ORTHO05D008344 9.3e-63 244.6 251 47.4
Nn3g21322 Nelumbo nucifera HOM05D006775 ORTHO05D008344 9.3e-63 244.6 248 49.6
TWI09G0706 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 1.2e-62 244.2 254 49.2
TWI09G0159 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 1.6e-62 243.8 254 49.2
MBI18_g12413_MAGBIO Magnolia biondii HOM05D006775 ORTHO05D008344 2.7e-62 243.0 248 49.6
Cpa.g.sc1008.3 Carica papaya HOM05D006775 ORTHO05D008344 4.6e-62 242.3 245 50.2
Aqoxy5G01958 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 1.0e-61 241.1 249 48.6
vmacro08201 Vaccinium macrocarpon HOM05D006775 ORTHO05D008344 1.8e-61 240.4 236 48.7
Hma1.2p1_0823F.1_g224630 Hydrangea macrophylla HOM05D006775 ORTHO05D008344 2.3e-61 240.0 247 47.4
HanXRQChr03g0079491 Helianthus annuus HOM05D006775 ORTHO05D008344 8.7e-61 238.0 252 49.2
MD00G1092600 Malus domestica HOM05D006775 ORTHO05D008344 8.7e-61 238.0 248 47.6
Sabra08G0157200 Salix brachista HOM05D006775 ORTHO05D008344 8.7e-61 238.0 250 49.6
Cc03_g02340 Coffea canephora HOM05D006775 ORTHO05D008344 1.1e-60 237.7 252 48.4
MELO3C006607.2 Cucumis melo HOM05D006775 ORTHO05D008344 1.1e-60 237.7 249 46.6
GSVIVG01017799001 Vitis vinifera HOM05D000611 ORTHO05D000809 1.9e-60 236.9 256 48.0
PGSC0003DMG400022660 Solanum tuberosum HOM05D006775 ORTHO05D008344 2.5e-60 236.5 252 48.4
AUR62042989 Chenopodium quinoa HOM05D006775 ORTHO05D008344 1.3e-59 234.2 262 47.3
CsaV3_3G014150 Cucumis sativus L. HOM05D006775 ORTHO05D008344 1.6e-59 233.8 250 46.4
ECA240G4404 Erigeron canadensis HOM05D006775 ORTHO05D008344 2.1e-59 233.4 251 46.6
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 2.8e-59 233.0 232 50.9
ClCG05G005800 Citrullus lanatus HOM05D006775 ORTHO05D008344 3.7e-59 232.6 253 44.3
Solyc01g067280.3 Solanum lycopersicum HOM05D006775 ORTHO05D008344 3.7e-59 232.6 252 47.6
Nitab4.5_0003256g0010 Nicotiana tabacum HOM05D006775 ORTHO05D008344 4.8e-59 232.3 257 49.0
Gohir.A09G233400 Gossypium hirsutum HOM05D006775 ORTHO05D008344 3.1e-58 229.6 240 50.0
EL10Ac3g06567 Beta vulgaris HOM05D006775 ORTHO05D008344 4.0e-58 229.2 247 48.6
Sopen01g029070 Solanum pennellii HOM05D006775 ORTHO05D008344 6.9e-58 228.4 252 46.8
Nn4g25991 Nelumbo nucifera HOM05D006775 ORTHO05D008344 2.0e-57 226.9 239 47.7
Sed0012602 Sechium edule HOM05D006775 ORTHO05D008344 9.9e-57 224.6 254 44.9
DCAR_002444 Daucus carota HOM05D006775 ORTHO05D008344 1.7e-56 223.8 247 44.5
unitig_32.g10786 Utricularia gibba HOM05D006775 ORTHO05D008344 1.9e-55 220.3 239 45.2
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 5.5e-55 218.8 255 44.3
Gohir.D09G234500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.2e-54 217.6 240 48.8
Peaxi162Scf00386g00010 Petunia axillaris HOM05D006775 ORTHO05D008344 1.6e-54 217.2 253 45.1
Aa31LG9G1860 Aethionema arabicum HOM05D006775 ORTHO05D008344 2.3e-53 213.4 251 45.8
BcaC09g50254 Brassica carinata HOM05D001154 ORTHO05D001175 2.3e-53 213.4 255 43.9
C01p27330 Brassica napus HOM05D006775 ORTHO05D008344 2.3e-53 213.4 255 43.9
BolC1t02676H Brassica oleracea HOM05D006775 ORTHO05D008344 2.3e-53 213.4 255 43.9
Carub.0007s2625 Capsella rubella HOM05D006775 ORTHO05D008344 3.0e-53 213.0 250 45.2
PSO832G0266 Papaver somniferum HOM05D006775 ORTHO05D008344 3.9e-53 212.6 240 45.0
CARHR289990 Cardamine hirsuta HOM05D006775 ORTHO05D008344 1.1e-52 211.1 257 43.6
THA.LOC104820238 Tarenaya hassleriana HOM05D006775 ORTHO05D008344 1.1e-52 211.1 249 45.4
Gorai.006G257400 Gossypium raimondii HOM05D006775 ORTHO05D008344 1.5e-52 210.7 240 47.5
HPP92_025211 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.5e-52 210.7 246 41.9
HPP92_025229 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.9e-52 210.3 246 41.9
ATR0706G197 Amborella trichopoda HOM05D006775 ORTHO05D008344 2.5e-52 209.9 245 44.5
A01p21970 Brassica napus HOM05D006775 ORTHO05D008344 3.3e-52 209.5 255 43.5
BraA01t02103Z Brassica rapa HOM05D006775 ORTHO05D008344 3.3e-52 209.5 255 43.5
Sp7g13860 Schrenkiella parvula HOM05D006775 ORTHO05D008344 3.3e-52 209.5 249 45.8
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 7.4e-52 208.4 281 41.3
RcHm_v2.0_Chr6g0302841 Rosa chinensis HOM05D006775 ORTHO05D008344 3.1e-50 203.0 279 40.9
CANSAT78G0382 Cannabis sativa HOM05D006775 ORTHO05D008344 2.0e-49 200.3 253 44.7
Gohir.A10G101330 Gossypium hirsutum HOM05D006775 ORTHO05D008344 3.2e-47 193.0 167 54.5
Duzib052G0853 Durio zibethinus HOM05D006775 ORTHO05D008344 3.5e-46 189.5 239 45.2
Haze_01265 Corylus avellana HOM05D006775 ORTHO05D008344 6.0e-46 188.7 171 53.8
TWI09G0165 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 1.8e-45 187.2 166 52.4
Gohir.D10G153500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 5.7e-44 182.2 238 43.3
Oeu062887.1 Olea europaea HOM05D006775 ORTHO05D008344 6.3e-43 178.7 157 54.1
Os05g0372800 Oryza sativa ssp. japonica HOM05D006775 ORTHO05D008344 8.2e-43 178.3 240 41.2
Rhsim04G0216500 Rhododendron simsii HOM05D006775 ORTHO05D008344 8.2e-43 178.3 240 40.4
Pp3c2_550 Physcomitrium patens HOM05D006775 ORTHO05D008344 4.1e-42 176.0 254 39.0
Prupe.1G365500 Prunus persica HOM05D006775 ORTHO05D008344 7.7e-41 171.8 166 48.8
FvH4_2g38460 Fragaria vesca HOM05D006775 ORTHO05D008344 1.0e-40 171.4 335 35.2
Zm00001eb285420 Zea mays HOM05D006775 ORTHO05D008344 1.4e-39 167.5 240 37.9
AagrBONN_evm.TU.Sc2ySwM_362.2565 Anthoceros agrestis HOM05D006775 ORTHO05D008344 5.5e-39 165.6 233 36.9
FAN20G0357 Fragaria x ananassa HOM05D006775 ORTHO05D008344 2.1e-38 163.7 315 33.0
CDE08G1672 Ceratophyllum demersum HOM05D006775 ORTHO05D008344 5.1e-37 159.1 251 36.7
Dinv38323 Davidia involucrata HOM05D006775 ORTHO05D008344 2.5e-36 156.8 164 50.0
HPP92_025275 Vanilla planifolia HOM05D006775 ORTHO05D008344 8.2e-35 151.8 156 44.2
SMO340G0127 Selaginella moellendorffii HOM05D006775 ORTHO05D008344 1.9e-31 140.6 153 46.4
AT4G15563 Arabidopsis thaliana HOM05D006775 ORTHO05D008344 2.7e-30 136.7 162 45.7
AL7G39920 Arabidopsis lyrata HOM05D006775 ORTHO05D008344 2.3e-29 133.7 162 45.1
Thhalv10026419m.g Eutrema salsugineum HOM05D006775 ORTHO05D008344 2.0e-28 130.6 162 43.2
Eucgr.A01819 Eucalyptus grandis HOM05D006775 ORTHO05D008344 8.8e-21 105.1 86 55.8
CSS0032456 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 1.1e-20 104.8 84 56.0
CBR_g21749 Chara braunii HOM05D006775 ORTHO05D008344 1.1e-20 104.8 344 23.3
Duzib212G0132 Durio zibethinus HOM05D006775 ORTHO05D008344 8.2e-19 98.6 114 45.6
Aqoxy5G00644 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 2.4e-18 97.1 88 52.3
Gorai.011G171400 Gossypium raimondii HOM05D006775 ORTHO05D008344 5.3e-18 95.9 110 48.2
Zm00001eb351020 Zea mays HOM05D006775 ORTHO05D008344 9.1e-18 95.1 148 35.8
Oeu052260.1 Olea europaea HOM05D006775 ORTHO05D008344 1.0e-16 91.7 152 41.4
CSS0028683 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 1.3e-16 91.3 87 47.1
Rhsim12G0090200 Rhododendron simsii HOM05D006775 ORTHO05D008344 1.9e-15 87.4 66 56.1
Haze_01266 Corylus avellana HOM05D006775 ORTHO05D008344 8.0e-14 82.0 59 64.4
Actinidia23427 Actinidia chinensis HOM05D006775 ORTHO05D008344 2.3e-13 80.5 74 47.3
MD09G1114900 Malus domestica HOM05D006775 ORTHO05D008344 3.4e-12 76.6 77 45.5
PSO210G2970 Papaver somniferum HOM05D006775 ORTHO05D008344 3.4e-12 76.6 107 37.4


User provided reference genes

Program Settings