Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.UN07NX Arachis hypogaea HOM05D000445 ORTHO05D010400 6.8e-50 200.3 96 100.0
LjContig00318g0026726 Lotus japonicus HOM05D000445 ORTHO05D000314 2.4e-15 85.5 55 78.2
arahy.Tifrunner.gnm1.ann1.69INVX Arachis hypogaea HOM05D000445 ORTHO05D000314 3.5e-14 81.6 39 97.4
arahy.Tifrunner.gnm1.ann1.SV0IPA Arachis hypogaea HOM05D000445 ORTHO05D000314 3.5e-14 81.6 40 95.0
arahy.Tifrunner.gnm1.ann1.U896IL Arachis hypogaea HOM05D000445 ORTHO05D000314 3.5e-14 81.6 39 97.4
arahy.Tifrunner.gnm1.ann1.Z1U5RE Arachis hypogaea HOM05D000445 ORTHO05D000314 3.5e-14 81.6 39 97.4
Lj4g0020232 Lotus japonicus HOM05D000445 ORTHO05D000314 3.5e-14 81.6 39 97.4
LjContig00318g0022366 Lotus japonicus HOM05D000445 ORTHO05D000314 3.5e-14 81.6 39 97.4
LjContig00319g0026737 Lotus japonicus HOM05D000445 ORTHO05D000314 3.5e-14 81.6 39 97.4
Lalb_Chr01g0014981 Lupinus albus HOM05D000445 ORTHO05D000314 1.0e-13 80.1 39 92.3
Lalb_Chr07g0191931 Lupinus albus HOM05D000445 ORTHO05D000314 1.0e-13 80.1 39 92.3
Lalb_Chr12g0206621 Lupinus albus HOM05D000445 ORTHO05D000314 1.0e-13 80.1 39 92.3
ATR0258G003 Amborella trichopoda HOM05D000445 ORTHO05D000314 3.9e-13 78.2 39 92.3
arahy.Tifrunner.gnm1.ann1.L97NAC Arachis hypogaea HOM05D000445 ORTHO05D000314 6.6e-13 77.4 40 90.0
arahy.Tifrunner.gnm1.ann1.YARC2U Arachis hypogaea HOM05D000445 ORTHO05D000314 6.6e-13 77.4 38 97.4
Lalb_Chr13g0292661 Lupinus albus HOM05D000445 ORTHO05D000314 1.9e-12 75.9 39 87.2
Glyma.16G065300 Glycine max HOM05D000445 ORTHO05D000314 2.5e-12 75.5 39 89.7
MELO3C027250.2 Cucumis melo HOM05D000445 ORTHO05D000314 4.3e-12 74.7 38 92.1
Psat2g138200 Pisum sativum HOM05D000445 ORTHO05D000314 2.1e-11 72.4 41 75.6
VMungo0942G0001 Vigna mungo HOM05D000445 ORTHO05D000314 3.6e-11 71.6 39 84.6
VMungo0976G0001 Vigna mungo HOM05D000445 ORTHO05D000314 3.6e-11 71.6 39 84.6
Psat0s1661g0120 Pisum sativum HOM05D000445 ORTHO05D000314 4.7e-11 71.2 41 75.6
Psat0s2065g0040 Pisum sativum HOM05D000445 ORTHO05D000314 4.7e-11 71.2 41 75.6
Psat0s680g0040 Pisum sativum HOM05D000445 ORTHO05D000314 4.7e-11 71.2 41 75.6
Medtr3g035670 Medicago truncatula HOM05D000445 ORTHO05D000314 3.1e-10 68.6 36 86.1
DCAR_031999 Daucus carota HOM05D000445 ORTHO05D000314 3.8e-08 61.6 47 59.6
DCAR_032529 Daucus carota HOM05D000445 ORTHO05D000314 3.8e-08 61.6 47 59.6
DCAR_032547 Daucus carota HOM05D000445 ORTHO05D000314 3.8e-08 61.6 47 59.6
AUR62030850 Chenopodium quinoa HOM05D000445 ORTHO05D000314 6.4e-08 60.8 43 65.1
Ah.10g027230 Amaranthus hybridus HOM05D000445 ORTHO05D000314 3.2e-07 58.5 29 89.7
Ah.10g027290 Amaranthus hybridus HOM05D000445 ORTHO05D000314 3.2e-07 58.5 29 89.7
Ah.10g027420 Amaranthus hybridus HOM05D000445 ORTHO05D000314 3.2e-07 58.5 29 89.7
Ah.10g027670 Amaranthus hybridus HOM05D000445 ORTHO05D000314 3.2e-07 58.5 29 89.7
Ah.10g027730 Amaranthus hybridus HOM05D000445 ORTHO05D000314 3.2e-07 58.5 29 89.7
Ah.10g028850 Amaranthus hybridus HOM05D000445 ORTHO05D000314 3.2e-07 58.5 29 89.7
Ah.10g029020 Amaranthus hybridus HOM05D000445 ORTHO05D000314 3.2e-07 58.5 29 89.7
CAN.G1875.2 Capsicum annuum HOM05D000445 ORTHO05D000314 3.2e-07 58.5 29 89.7
CAN.G745.36 Capsicum annuum HOM05D000445 ORTHO05D000314 3.2e-07 58.5 29 89.7
AUR62032991 Chenopodium quinoa HOM05D000445 ORTHO05D000314 3.2e-07 58.5 29 89.7
Hma1.2p1_0192F.1_g083680 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 3.2e-07 58.5 29 89.7
Hma1.2p1_0192F.1_g083690 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 3.2e-07 58.5 29 89.7
Hma1.2p1_1244F.1_g270040 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 3.2e-07 58.5 29 89.7
Hma1.2p1_4210F.1_g338452 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 3.2e-07 58.5 29 89.7
LjContig00489g0008652 Lotus japonicus HOM05D000445 ORTHO05D000314 3.2e-07 58.5 29 89.7
Aqoxy169s001 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 4.2e-07 58.2 27 96.3
Aqoxy3G01863 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 4.2e-07 58.2 27 96.3
CsaV3_UNG209000 Cucumis sativus L. HOM05D000445 ORTHO05D000314 4.2e-07 58.2 27 96.3
HanXRQChr00c0349g0573991 Helianthus annuus HOM05D000445 ORTHO05D000314 4.2e-07 58.2 43 60.5
HanXRQChr00c0451g0574821 Helianthus annuus HOM05D000445 ORTHO05D000314 4.2e-07 58.2 43 60.5
HanXRQChr00c0585g0576211 Helianthus annuus HOM05D000445 ORTHO05D000314 4.2e-07 58.2 43 60.5
HanXRQChr00c0634g0576591 Helianthus annuus HOM05D000445 ORTHO05D000314 4.2e-07 58.2 43 60.5
HanXRQChr01g0020161 Helianthus annuus HOM05D000445 ORTHO05D000314 4.2e-07 58.2 43 60.5
HanXRQChr05g0152341 Helianthus annuus HOM05D000445 ORTHO05D000314 4.2e-07 58.2 43 60.5
HanXRQChr05g0152501 Helianthus annuus HOM05D000445 ORTHO05D000314 4.2e-07 58.2 43 60.5
HanXRQChr10g0284471 Helianthus annuus HOM05D000445 ORTHO05D000314 4.2e-07 58.2 43 60.5
HanXRQChr11g0321171 Helianthus annuus HOM05D000445 ORTHO05D000314 4.2e-07 58.2 43 60.5
HanXRQChr11g0327091 Helianthus annuus HOM05D000445 ORTHO05D000314 4.2e-07 58.2 43 60.5
HanXRQChr11g0333801 Helianthus annuus HOM05D000445 ORTHO05D000314 4.2e-07 58.2 43 60.5
HanXRQChr12g0369911 Helianthus annuus HOM05D000445 ORTHO05D000314 4.2e-07 58.2 43 60.5
HanXRQChr13g0416591 Helianthus annuus HOM05D000445 ORTHO05D000314 4.2e-07 58.2 43 60.5
HanXRQChr13g0418951 Helianthus annuus HOM05D000445 ORTHO05D000314 4.2e-07 58.2 43 60.5
HanXRQChr15g0474951 Helianthus annuus HOM05D000445 ORTHO05D000314 4.2e-07 58.2 43 60.5
HanXRQChr17g0569651 Helianthus annuus HOM05D000445 ORTHO05D000314 4.2e-07 58.2 43 60.5
HanXRQCPg0580251 Helianthus annuus HOM05D000445 ORTHO05D000314 4.2e-07 58.2 43 60.5
HanXRQCPg0580471 Helianthus annuus HOM05D000445 ORTHO05D000314 4.2e-07 58.2 43 60.5
Nn031s41601 Nelumbo nucifera HOM05D000445 ORTHO05D000314 4.2e-07 58.2 27 96.3
Nn233s45563 Nelumbo nucifera HOM05D000445 ORTHO05D000314 4.2e-07 58.2 27 96.3
Nn269s46007 Nelumbo nucifera HOM05D000445 ORTHO05D000314 4.2e-07 58.2 27 96.3
CAN.G547.16 Capsicum annuum HOM05D000445 ORTHO05D000314 5.4e-07 57.8 29 86.2
Solyc00g500147.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 5.4e-07 57.8 29 86.2
Lsat_1_v5_gn_0_15580 Lactuca sativa HOM05D000445 ORTHO05D000314 7.1e-07 57.4 36 69.4
Lsat_1_v5_gn_3_104600 Lactuca sativa HOM05D000445 ORTHO05D000314 7.1e-07 57.4 36 69.4
Lsat_1_v5_gn_4_147941 Lactuca sativa HOM05D000445 ORTHO05D000314 7.1e-07 57.4 36 69.4
Lsat_1_v5_gn_7_920 Lactuca sativa HOM05D000445 ORTHO05D000314 7.1e-07 57.4 36 69.4
Lsat_1_v5_gn_8_26500 Lactuca sativa HOM05D000445 ORTHO05D000314 7.1e-07 57.4 36 69.4
Lsat_1_v5_gn_9_18681 Lactuca sativa HOM05D000445 ORTHO05D000314 7.1e-07 57.4 36 69.4
ECA074G0010 Erigeron canadensis HOM05D000445 ORTHO05D000314 1.2e-06 56.6 29 86.2
ECA169G0002 Erigeron canadensis HOM05D000445 ORTHO05D000314 1.2e-06 56.6 29 86.2
Medtr0052s0190 Medicago truncatula HOM05D000445 ORTHO05D000314 1.2e-06 56.6 31 83.9
Medtr0055s0010 Medicago truncatula HOM05D000445 ORTHO05D000314 1.2e-06 56.6 31 83.9
Dinv09726 Davidia involucrata HOM05D000445 ORTHO05D000314 1.6e-06 56.2 29 86.2
Migut.D01323 Erythranthe guttata HOM05D000445 ORTHO05D000314 1.6e-06 56.2 29 86.2
Gohir.D01G101865 Gossypium hirsutum HOM05D000445 ORTHO05D000314 1.6e-06 56.2 29 86.2
Peaxi162Scf00163g00089 Petunia axillaris HOM05D000445 ORTHO05D000314 1.6e-06 56.2 29 86.2
Solyc00g500037.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.6e-06 56.2 29 86.2
Solyc00g500046.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.6e-06 56.2 29 86.2
Solyc00g500081.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.6e-06 56.2 29 86.2
Solyc00g500128.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.6e-06 56.2 29 86.2
Solyc00g500198.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.6e-06 56.2 29 86.2
Solyc00g500327.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.6e-06 56.2 29 86.2
Sopen10g008920 Solanum pennellii HOM05D000445 ORTHO05D000314 1.6e-06 56.2 29 86.2
PGSC0003DMG400015064 Solanum tuberosum HOM05D000445 ORTHO05D000314 1.6e-06 56.2 29 86.2
PGSC0003DMG400020533 Solanum tuberosum HOM05D000445 ORTHO05D000314 1.6e-06 56.2 29 86.2
PGSC0003DMG400046719 Solanum tuberosum HOM05D000445 ORTHO05D000314 1.6e-06 56.2 29 86.2
PGSC0003DMG402024143 Solanum tuberosum HOM05D000445 ORTHO05D000314 1.6e-06 56.2 29 86.2
ClCG00G002340 Citrullus lanatus HOM05D008299 ORTHO05D010400 2.1e-06 55.8 57 54.4
PSO548G0004 Papaver somniferum HOM05D000445 ORTHO05D000314 2.1e-06 55.8 27 92.6
PSO548G0115 Papaver somniferum HOM05D000445 ORTHO05D000314 2.1e-06 55.8 27 92.6
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 2.7e-06 55.5 29 86.2
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 2.7e-06 55.5 29 86.2
unitig_91.g26489 Utricularia gibba HOM05D000445 ORTHO05D000314 2.7e-06 55.5 29 86.2
unitig_91.g26516 Utricularia gibba HOM05D000445 ORTHO05D000314 2.7e-06 55.5 29 86.2
unitig_91.g26530 Utricularia gibba HOM05D000445 ORTHO05D000314 2.7e-06 55.5 29 86.2
CARHR282560 Cardamine hirsuta HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 79.3
Cfa015164 Carpinus fangiana HOM05D000445 ORTHO05D000314 3.5e-06 55.1 26 92.3
Hund01217 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund08796 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund10280 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund17850 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund26852 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund27459 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund27753 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund27920 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund27936 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund28275 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund28435 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund28591 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund28610 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund28646 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund28854 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund29332 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund29402 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund29423 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund29470 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund29473 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund29490 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund29892 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund30293 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund30787 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund30982 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
Hund31112 Selenicereus undatus HOM05D000445 ORTHO05D000314 3.5e-06 55.1 29 82.8
BNapus_Darmor_BZH_scaffold_287p00320 Brassica napus HOM05D000445 ORTHO05D000314 4.6e-06 54.7 29 79.3
C06p21350 Brassica napus HOM05D000445 ORTHO05D000314 4.6e-06 54.7 29 79.3
C06p23170 Brassica napus HOM05D000445 ORTHO05D000314 4.6e-06 54.7 29 79.3
C09p24760 Brassica napus HOM05D000445 ORTHO05D000314 4.6e-06 54.7 29 79.3
BolSC29t60492H Brassica oleracea HOM05D000445 ORTHO05D000314 4.6e-06 54.7 29 79.3
BolSC47t61071H Brassica oleracea HOM05D000445 ORTHO05D000314 4.6e-06 54.7 29 79.3
BraSC25t45894Z Brassica rapa HOM05D000445 ORTHO05D000314 4.6e-06 54.7 29 79.3
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 6.0e-06 54.3 29 82.8
SabraPtG0004600 Salix brachista HOM05D000445 ORTHO05D000314 6.0e-06 54.3 29 82.8
SabraPtG0006900 Salix brachista HOM05D000445 ORTHO05D000314 6.0e-06 54.3 29 82.8


User provided reference genes

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